Znf322 (zinc finger protein 322) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: Znf322 (zinc finger protein 322) Ictidomys tridecemlineatus
Analyze
Symbol: Znf322
Name: zinc finger protein 322
RGD ID: 12683073
Description: ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN positive regulation of stem cell population maintenance (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049461,305,576 - 1,337,434 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049366712,284,119 - 2,315,994 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
centrosome  (ISO)
cytoplasm  (ISO)
cytosol  (ISO)
nucleoplasm  (ISO)
nucleus  (ISO)

Molecular Function

References

Genomics

Comparative Map Data
Znf322
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049461,305,576 - 1,337,434 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049366712,284,119 - 2,315,994 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF322
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38626,634,383 - 26,659,746 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl626,634,383 - 26,659,752 (-)EnsemblGRCh38hg38GRCh38
GRCh37626,634,611 - 26,659,974 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36626,742,590 - 26,767,942 (-)NCBINCBI36Build 36hg18NCBI36
Build 34626,744,497 - 26,767,741NCBI
Celera627,863,913 - 27,889,235 (-)NCBICelera
Cytogenetic Map6p22.2NCBI
HuRef626,578,016 - 26,603,379 (-)NCBIHuRef
CHM1_1626,636,675 - 26,662,014 (-)NCBICHM1_1
T2T-CHM13v2.0626,502,803 - 26,528,154 (-)NCBIT2T-CHM13v2.0
Zfp322a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391323,537,273 - 23,553,378 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1323,537,273 - 23,553,378 (-)EnsemblGRCm39 Ensembl
GRCm381323,353,103 - 23,369,208 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1323,353,103 - 23,369,208 (-)EnsemblGRCm38mm10GRCm38
MGSCv371323,444,973 - 23,461,071 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361323,362,807 - 23,376,634 (-)NCBIMGSCv36mm8
Celera1323,585,423 - 23,601,520 (-)NCBICelera
Cytogenetic Map13A3.1NCBI
cM Map139.55NCBI
Zfp322a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81742,201,989 - 42,216,060 (+)NCBIGRCr8
mRatBN7.21741,773,789 - 41,789,654 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1741,773,782 - 41,790,078 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1741,853,775 - 41,867,788 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01743,457,832 - 43,471,845 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01741,733,195 - 41,747,208 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01744,025,036 - 44,040,900 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1744,025,267 - 44,039,284 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01745,878,427 - 45,894,295 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41748,978,049 - 48,992,066 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1741,403,651 - 41,417,666 (+)NCBICelera
Cytogenetic Map17p11NCBI
Znf322
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_004955483243,819 - 262,593 (+)NCBIChiLan1.0ChiLan1.0
ZNF322
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2541,278,573 - 41,304,377 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1637,280,051 - 37,305,855 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0626,466,052 - 26,491,433 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1627,123,571 - 27,148,816 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl627,126,531 - 27,127,739 (-)Ensemblpanpan1.1panPan2
ZNF322
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13524,374,689 - 24,397,793 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3524,377,632 - 24,378,840 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3524,231,531 - 24,254,037 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03524,558,280 - 24,580,611 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3524,558,285 - 24,580,957 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13524,339,187 - 24,361,722 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03524,391,102 - 24,413,664 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03525,855,769 - 25,878,333 (-)NCBIUU_Cfam_GSD_1.0
ZNF322
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl721,127,869 - 21,143,387 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1721,128,040 - 21,143,404 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2722,517,285 - 22,522,066 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ZNF322
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11745,560,042 - 45,585,154 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1745,580,979 - 45,582,184 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604426,565,248 - 26,590,353 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Znf322
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624756248,724 - 265,583 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_005337071   ⟹   XP_005337128
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244049461,306,085 - 1,337,434 (+)NCBI
SpeTri2.0NW_0049366712,284,119 - 2,315,718 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013363649   ⟹   XP_013219103
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244049461,305,576 - 1,337,434 (+)NCBI
SpeTri2.0NW_0049366712,284,119 - 2,315,994 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021734411   ⟹   XP_021590086
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244049461,306,093 - 1,337,434 (+)NCBI
SpeTri2.0NW_0049366712,284,119 - 2,315,707 (-)NCBI
Sequence:
RefSeq Acc Id: XM_040283644   ⟹   XP_040139578
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244049461,306,085 - 1,337,434 (+)NCBI
Protein Sequences
Protein RefSeqs XP_005337128 (Get FASTA)   NCBI Sequence Viewer  
  XP_013219103 (Get FASTA)   NCBI Sequence Viewer  
  XP_021590086 (Get FASTA)   NCBI Sequence Viewer  
  XP_040139578 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_013219103   ⟸   XM_013363649
- Sequence:
RefSeq Acc Id: XP_005337128   ⟸   XM_005337071
- Sequence:
RefSeq Acc Id: XP_021590086   ⟸   XM_021734411
- Sequence:
RefSeq Acc Id: XP_040139578   ⟸   XM_040283644


Additional Information

Database Acc Id Source(s)
NCBI Gene Znf322 ENTREZGENE