Gpr83 (G protein-coupled receptor 83) - Rat Genome Database

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Gene: Gpr83 (G protein-coupled receptor 83) Ictidomys tridecemlineatus
Analyze
Symbol: Gpr83
Name: G protein-coupled receptor 83
RGD ID: 12681801
Description: ENCODES a protein that exhibits G protein-coupled receptor activity (inferred); neuropeptide receptor activity (inferred); neuropeptide Y receptor activity (inferred); INVOLVED IN response to glucocorticoid (ortholog); ASSOCIATED WITH intellectual disability (ortholog); FOUND IN cilium (inferred); membrane (inferred); non-motile cilium (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: probable G-protein coupled receptor 83
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494779,337,231 - 79,349,563 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936674541,934 - 553,677 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936674541,934 - 553,191 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Gpr83
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494779,337,231 - 79,349,563 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936674541,934 - 553,677 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936674541,934 - 553,191 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GPR83
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381194,377,316 - 94,401,419 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1194,377,316 - 94,401,419 (-)EnsemblGRCh38hg38GRCh38
GRCh371194,110,482 - 94,134,585 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361193,750,131 - 93,774,066 (-)NCBINCBI36Build 36hg18NCBI36
Build 341193,750,130 - 93,774,066NCBI
Celera1191,398,304 - 91,422,417 (-)NCBICelera
Cytogenetic Map11q21NCBI
HuRef1190,176,011 - 90,200,120 (-)NCBIHuRef
CHM1_11193,993,488 - 94,017,596 (-)NCBICHM1_1
T2T-CHM13v2.01194,384,353 - 94,408,454 (-)NCBIT2T-CHM13v2.0
Gpr83
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39914,771,038 - 14,782,085 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl914,771,506 - 14,782,085 (+)EnsemblGRCm39 Ensembl
GRCm38914,859,880 - 14,870,789 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl914,860,210 - 14,870,789 (+)EnsemblGRCm38mm10GRCm38
MGSCv37914,664,698 - 14,673,943 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36914,610,647 - 14,619,892 (+)NCBIMGSCv36mm8
Celera912,141,017 - 12,150,262 (+)NCBICelera
Cytogenetic Map9A2NCBI
cM Map94.4NCBI
Gpr83
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8819,974,995 - 19,985,483 (+)NCBIGRCr8
mRatBN7.2811,693,540 - 11,704,028 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl811,693,540 - 11,704,028 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx815,678,274 - 15,688,779 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0813,976,020 - 13,986,525 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0811,951,920 - 11,962,328 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0813,365,583 - 13,376,071 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl813,365,583 - 13,376,070 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0813,306,230 - 13,316,718 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4811,648,755 - 11,659,242 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1811,648,754 - 11,659,241 (+)NCBI
Celera813,163,211 - 13,173,699 (+)NCBICelera
Cytogenetic Map8q12NCBI
Gpr83
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955414216,397 - 229,659 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955414216,867 - 229,659 (+)NCBIChiLan1.0ChiLan1.0
GPR83
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2995,220,695 - 95,246,902 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11196,312,430 - 96,336,943 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01189,380,290 - 89,405,039 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11192,868,031 - 92,890,048 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1192,868,849 - 92,889,827 (-)Ensemblpanpan1.1panPan2
GPR83
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1216,536,486 - 6,546,859 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl216,536,485 - 6,546,859 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha216,546,809 - 6,557,281 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0216,716,881 - 6,727,371 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl216,717,197 - 6,729,283 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1216,497,570 - 6,508,038 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0216,566,679 - 6,577,094 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0216,616,620 - 6,627,114 (+)NCBIUU_Cfam_GSD_1.0
GPR83
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl926,548,594 - 26,560,473 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1926,549,230 - 26,560,473 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2930,303,221 - 30,317,362 (-)NCBISscrofa10.2Sscrofa10.2susScr3
GPR83
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1185,577,620 - 85,597,780 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl185,583,039 - 85,597,423 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604340,179,904 - 40,195,769 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gpr83
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473539,049,761 - 39,061,730 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473539,049,652 - 39,062,198 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005337188 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAESOR010000006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSSTOT00000006851   ⟹   ENSSTOP00000006124
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_004936674542,094 - 552,013 (+)Ensembl
Ensembl Acc Id: ENSSTOT00000041272   ⟹   ENSSTOP00000028578
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_004936674541,934 - 553,677 (+)Ensembl
RefSeq Acc Id: XM_005337188   ⟹   XP_005337245
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494779,337,231 - 79,349,563 (-)NCBI
SpeTri2.0NW_004936674541,934 - 553,191 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005337245 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000006124.3
  ENSSTOP00000028578.1
GenBank Protein KAG3286371 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_005337245   ⟸   XM_005337188
- UniProtKB: A0A287D4U8 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSTOP00000028578   ⟸   ENSSTOT00000041272
Ensembl Acc Id: ENSSTOP00000006124   ⟸   ENSSTOT00000006851
Protein Domains
G-protein coupled receptors family 1 profile


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000006859 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000006851.3 UniProtKB/TrEMBL
  ENSSTOT00000041272.1 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  NPY_rcpt UniProtKB/TrEMBL
NCBI Gene Gpr83 ENTREZGENE
PANTHER G-PROTEIN COUPLED RECEPTOR UniProtKB/TrEMBL
  G-PROTEIN COUPLED RECEPTOR 83 UniProtKB/TrEMBL
Pfam 7tm_1 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  NRPEPTIDEYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
SMART 7TM_GPCR_Srsx UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A287D4U8 ENTREZGENE, UniProtKB/TrEMBL
  I3M8N0_ICTTR UniProtKB/TrEMBL