Kansl1l (KAT8 regulatory NSL complex subunit 1 like) - Rat Genome Database

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Gene: Kansl1l (KAT8 regulatory NSL complex subunit 1 like) Ictidomys tridecemlineatus
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Symbol: Kansl1l
Name: KAT8 regulatory NSL complex subunit 1 like
RGD ID: 12633329
Description: ENCODES a protein that exhibits histone acetyltransferase binding (inferred); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); primary pulmonary hypertension (ortholog); trichorhinophalangeal syndrome type I (ortholog); FOUND IN H4 histone acetyltransferase complex (inferred); histone acetyltransferase complex (inferred); NSL complex (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303166,347,664 - 166,486,474 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936845109,432 - 246,833 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936845123,713 - 248,857 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Kansl1lSquirrelNeurodevelopmental Disorders  ISORGD:16064468554872ClinVar Annotator: match by term: Neurodevelopmental disorderClinVarPMID:25741868
Kansl1lSquirrelprimary pulmonary hypertension  ISORGD:16064468554872ClinVar Annotator: match by term: Primary pulmonary hypertensionClinVarPMID:28492532|PMID:31727138
Kansl1lSquirreltrichorhinophalangeal syndrome type I  ISORGD:16064468554872ClinVar Annotator: match by term: Trichorhinophalangeal dysplasia type IClinVarPMID:25741868


Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Kansl1lSquirrelH4 histone acetyltransferase complex part_ofIEAARBA:ARBA00027022150520179 UniProtGO_REF:0000117
Kansl1lSquirrelhistone acetyltransferase complex part_ofIEAInterPro:IPR026180150520179 InterProGO_REF:0000002
Kansl1lSquirrelNSL complex part_ofIEAPANTHER:PTN000500256150520179 TreeGrafterGO_REF:0000118

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Kansl1lSquirrelhistone acetyltransferase binding enablesIEAPANTHER:PTN000500256150520179 TreeGrafterGO_REF:0000118

PMID:30032202  



Kansl1l
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303166,347,664 - 166,486,474 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936845109,432 - 246,833 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936845123,713 - 248,857 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KANSL1L
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382210,021,421 - 210,172,760 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2210,021,421 - 210,171,409 (-)EnsemblGRCh38hg38GRCh38
GRCh372210,886,145 - 211,036,133 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362210,593,680 - 210,744,296 (-)NCBINCBI36Build 36hg18NCBI36
Celera2204,653,461 - 204,804,052 (-)NCBICelera
Cytogenetic Map2q34NCBI
HuRef2202,730,746 - 202,881,291 (-)NCBIHuRef
CHM1_12210,891,610 - 211,042,174 (-)NCBICHM1_1
T2T-CHM13v2.02210,502,126 - 210,653,462 (-)NCBIT2T-CHM13v2.0
Kansl1l
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39166,758,402 - 66,856,754 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl166,758,407 - 66,856,721 (-)EnsemblGRCm39 Ensembl
GRCm38166,719,243 - 66,817,596 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl166,719,248 - 66,817,562 (-)EnsemblGRCm38mm10GRCm38
MGSCv37166,765,817 - 66,864,169 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36166,652,571 - 66,750,754 (-)NCBIMGSCv36mm8
Celera167,233,059 - 67,332,985 (-)NCBICelera
Cytogenetic Map1C3NCBI
cM Map133.61NCBI
Kansl1l
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8975,660,865 - 75,766,730 (-)NCBIGRCr8
mRatBN7.2968,211,151 - 68,316,992 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl968,211,189 - 68,300,222 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0973,710,959 - 73,819,335 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl973,713,430 - 73,799,427 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0973,490,079 - 73,595,265 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4965,490,343 - 65,579,472 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera965,689,862 - 65,799,639 (-)NCBICelera
Cytogenetic Map9q32NCBI
Kansl1l
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554575,338,509 - 5,423,228 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554575,333,490 - 5,424,632 (+)NCBIChiLan1.0ChiLan1.0
KANSL1L
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v213112,643,578 - 112,794,716 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B112,659,101 - 112,810,705 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B97,279,218 - 97,429,158 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B215,683,077 - 215,831,064 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B215,683,077 - 215,816,666 (-)Ensemblpanpan1.1panPan2
KANSL1L
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13717,883,992 - 18,013,389 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3717,885,457 - 18,013,634 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3718,764,542 - 18,895,021 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03717,821,859 - 17,952,338 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3717,821,885 - 17,951,283 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13717,774,750 - 17,905,188 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03717,737,056 - 17,867,534 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03717,751,511 - 17,882,351 (-)NCBIUU_Cfam_GSD_1.0
KANSL1L
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15112,739,256 - 112,916,641 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.115112,741,127 - 112,902,226 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215124,561,611 - 124,740,162 (-)NCBISscrofa10.2Sscrofa10.2susScr3
KANSL1L
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11095,721,081 - 95,869,914 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1095,718,922 - 95,851,869 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666040103,488,362 - 103,634,232 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Kansl1l
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247656,080,327 - 6,204,534 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247656,080,895 - 6,204,780 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.






Ensembl Acc Id: ENSSTOT00000010331   ⟹   ENSSTOP00000009270
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_004936845114,156 - 246,833 (+)Ensembl
Ensembl Acc Id: ENSSTOT00000034604   ⟹   ENSSTOP00000032474
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_004936845109,432 - 231,020 (+)Ensembl
RefSeq Acc Id: XM_013365605   ⟹   XP_013221059
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303166,347,664 - 166,486,473 (-)NCBI
SpeTri2.0NW_004936845123,713 - 248,857 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013365606   ⟹   XP_013221060
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303166,347,664 - 166,486,472 (-)NCBI
SpeTri2.0NW_004936845123,744 - 248,857 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013365607   ⟹   XP_013221061
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303166,347,664 - 166,486,473 (-)NCBI
SpeTri2.0NW_004936845123,744 - 248,857 (+)NCBI
Sequence:
RefSeq Acc Id: XM_040294858   ⟹   XP_040150792
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303166,347,664 - 166,486,473 (-)NCBI
RefSeq Acc Id: XM_040294859   ⟹   XP_040150793
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303166,347,664 - 166,474,386 (-)NCBI
RefSeq Acc Id: XM_040294860   ⟹   XP_040150794
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303166,347,664 - 166,475,615 (-)NCBI
RefSeq Acc Id: XM_040294861   ⟹   XP_040150795
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303166,347,664 - 166,485,695 (-)NCBI
RefSeq Acc Id: XM_040294862   ⟹   XP_040150796
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303166,347,664 - 166,486,473 (-)NCBI
RefSeq Acc Id: XM_040294863   ⟹   XP_040150797
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303166,347,664 - 166,486,474 (-)NCBI
RefSeq Acc Id: XM_040294864   ⟹   XP_040150798
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303166,347,664 - 166,486,474 (-)NCBI
RefSeq Acc Id: XM_040294865   ⟹   XP_040150799
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303166,347,664 - 166,486,474 (-)NCBI
1 to 5 of 13 rows
1 to 5 of 13 rows
RefSeq Acc Id: XP_013221059   ⟸   XM_013365605
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_013221060   ⟸   XM_013365606
- Peptide Label: isoform X2
- UniProtKB: I3MFA6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013221061   ⟸   XM_013365607
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_040150798   ⟸   XM_040294864
- Peptide Label: isoform X4
RefSeq Acc Id: XP_040150797   ⟸   XM_040294863
- Peptide Label: isoform X3
PEHE



1 to 13 of 13 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSSTOG00000010328 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000010331.3 UniProtKB/TrEMBL
  ENSSTOT00000034604.1 UniProtKB/TrEMBL
Gene3D-CATH 6.10.250.3170 UniProtKB/TrEMBL
InterPro NSL1 UniProtKB/TrEMBL
  PEHE_dom UniProtKB/TrEMBL
NCBI Gene Kansl1l ENTREZGENE
PANTHER KAT8 REGULATORY NSL COMPLEX SUBUNIT 1-LIKE PROTEIN UniProtKB/TrEMBL
  PTHR22443 UniProtKB/TrEMBL
Pfam PEHE UniProtKB/TrEMBL
SMART PEHE UniProtKB/TrEMBL
UniProt A0A287DG02_ICTTR UniProtKB/TrEMBL
  I3MFA6 ENTREZGENE, UniProtKB/TrEMBL
1 to 13 of 13 rows