LOC101969569 (hemoglobin subunit beta-like) - Rat Genome Database

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Gene: LOC101969569 (hemoglobin subunit beta-like) Ictidomys tridecemlineatus
Analyze
Symbol: LOC101969569
Name: hemoglobin subunit beta-like
RGD ID: 12608428
Description: ENCODES a protein that exhibits haptoglobin binding (inferred); heme binding (inferred); hemoglobin alpha binding (inferred); INVOLVED IN cellular oxidant detoxification (inferred); hydrogen peroxide catabolic process (inferred); oxygen transport (inferred); FOUND IN blood microparticle (inferred); haptoglobin-hemoglobin complex (inferred); hemoglobin complex (inferred)
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494757,893,000 - 57,894,043 (+)NCBIHiC_Itri_2
SpeTri2.0NW_004937116185,107 - 186,150 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_021721495 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAESOR010000006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_021721495   ⟹   XP_021577170
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494757,893,000 - 57,894,043 (+)NCBI
SpeTri2.0NW_004937116185,107 - 186,150 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_021577170 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000016343.2
GenBank Protein KAG3285933 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_021577170   ⟸   XM_021721495
- Sequence:
Protein Domains
Globin family profile


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000022777 UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000026609.2 UniProtKB/TrEMBL
Gene3D-CATH 1.10.490.10 UniProtKB/TrEMBL
InterPro Globin UniProtKB/TrEMBL
  Globin-like_sf UniProtKB/TrEMBL
  Globin/Proto UniProtKB/TrEMBL
  Haemoglobin_b UniProtKB/TrEMBL
NCBI Gene LOC101969569 ENTREZGENE
PANTHER HEMOGLOBIN FAMILY MEMBER UniProtKB/TrEMBL
  HEMOGLOBIN SUBUNIT BETA UniProtKB/TrEMBL
Pfam Globin UniProtKB/TrEMBL
PRINTS BETAHAEM UniProtKB/TrEMBL
PROSITE GLOBIN UniProtKB/TrEMBL
Superfamily-SCOP SSF46458 UniProtKB/TrEMBL
UniProt I3MW48_ICTTR UniProtKB/TrEMBL