Zc3h14 (zinc finger CCCH-type containing 14)

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Gene: Zc3h14 (zinc finger CCCH-type containing 14) Ictidomys tridecemlineatus

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Symbol:

Zc3h14

Name:

zinc finger CCCH-type containing 14

RGD ID:

12467170

Description:

ENCODES a protein that exhibits metal ion binding (inferred); poly(A) binding (inferred); RNA binding (inferred); INVOLVED IN regulation of mRNA stability (inferred); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 56 (ortholog); Bardet-Biedl syndrome (ortholog); intellectual disability (ortholog); FOUND IN axon cytoplasm (inferred); cytoplasm (inferred); dendrite cytoplasm (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

zinc finger CCCH domain-containing protein 14; zinc finger CCCH-type containing 14, transcript variant X1; zinc finger CCCH-type containing 14, transcript variant X2; zinc finger CCCH-type containing 14, transcript variant X3; zinc finger CCCH-type containing 14, transcript variant X4; zinc finger CCCH-type containing 14, transcript variant X5

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	16,009,213 - 16,059,922 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936488	16,009,123 - 16,059,997 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936488	16,009,081 - 16,058,642 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autosomal recessive intellectual developmental disorder 56 (ISO)

Bardet-Biedl syndrome (ISO)

intellectual disability (ISO)

Leber congenital amaurosis 3 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

regulation of mRNA stability (IEA)

Cellular Component

axon cytoplasm (IEA)

cytoplasm (IEA)

dendrite cytoplasm (IEA)

nuclear speck (IEA)

nucleolus (IEA)

nucleus (IEA)

ribonucleoprotein complex (IEA)

Molecular Function

metal ion binding (IEA)

poly(A) binding (IEA)

protein binding (ISO)

RNA binding (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Zc3h14
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	16,009,213 - 16,059,922 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936488	16,009,123 - 16,059,997 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936488	16,009,081 - 16,058,642 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ZC3H14
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	14	88,563,037 - 88,627,596 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	14	88,562,970 - 88,627,596 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	14	89,029,381 - 89,093,940 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	14	88,099,067 - 88,149,606 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	14	88,099,066 - 88,149,605	NCBI
Celera	14	69,074,847 - 69,125,490 (+)	NCBI		Celera
Cytogenetic Map	14	q31.3	NCBI
HuRef	14	69,199,537 - 69,250,105 (+)	NCBI		HuRef
CHM1_1	14	88,967,098 - 89,017,712 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	14	82,783,861 - 82,848,491 (+)	NCBI		T2T-CHM13v2.0

Zc3h14
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	12	98,708,276 - 98,754,033 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	12	98,713,223 - 98,754,012 (+)	Ensembl		GRCm39 Ensembl
GRCm38	12	98,742,017 - 98,787,774 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	12	98,746,964 - 98,787,753 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	12	99,985,178 - 100,025,984 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	12	99,148,018 - 99,188,824 (+)	NCBI		MGSCv36	mm8
Celera	12	99,972,615 - 100,013,473 (+)	NCBI		Celera
Cytogenetic Map	12	E	NCBI
cM Map	12	49.88	NCBI

Zc3h14
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	123,736,120 - 123,773,775 (+)	NCBI		GRCr8
mRatBN7.2	6	118,006,420 - 118,044,480 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	118,006,458 - 118,044,105 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	6	118,157,055 - 118,194,694 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	118,453,852 - 118,491,495 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	117,788,713 - 117,826,350 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	122,729,834 - 122,767,462 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	122,729,874 - 122,767,462 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	6	131,951,431 - 131,988,793 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	6	122,919,317 - 122,956,935 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	6	122,923,063 - 122,959,828 (+)	NCBI
Celera	6	115,566,039 - 115,603,630 (+)	NCBI		Celera
Cytogenetic Map	6	q32	NCBI

Zc3h14
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955438	11,173,849 - 11,223,700 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955438	11,173,849 - 11,223,700 (+)	NCBI	ChiLan1.0	ChiLan1.0

ZC3H14
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	15	89,709,618 - 89,760,624 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	14	88,926,125 - 88,977,131 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	14	69,183,212 - 69,243,438 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	14	88,540,482 - 88,592,146 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	14	88,540,482 - 88,590,757 (+)	Ensembl	panpan1.1		panPan2

ZC3H14
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	8	59,796,607 - 59,849,928 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	8	59,796,598 - 59,849,926 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	8	59,374,599 - 59,429,229 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	8	60,066,146 - 60,120,957 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	8	60,066,143 - 60,122,051 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	8	59,745,053 - 59,799,899 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	8	59,790,823 - 59,845,182 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	8	60,124,572 - 60,179,220 (+)	NCBI		UU_Cfam_GSD_1.0

ZC3H14
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	110,463,517 - 110,513,257 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	7	110,463,459 - 110,513,231 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	116,962,039 - 117,008,530 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ZC3H14
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	24	66,200,140 - 66,249,343 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	24	66,200,181 - 66,249,210 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666053	53,560,713 - 53,608,487 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Zc3h14
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624734	13,734,401 - 13,788,057 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624734	13,734,406 - 13,787,341 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005321304	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005321305	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013356826	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013356828	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021723832	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040274574	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040274576	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040274577	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040274578	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040274579	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040274580	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010003700	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSTOT00000013189 ⟹ ENSSTOP00000011821

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936488	16,009,123 - 16,059,180 (+)	Ensembl

Ensembl Acc Id:

ENSSTOT00000036483 ⟹ ENSSTOP00000024271

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936488	16,009,154 - 16,059,189 (+)	Ensembl

Ensembl Acc Id:

ENSSTOT00000039162 ⟹ ENSSTOP00000028576

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936488	16,043,284 - 16,059,997 (+)	Ensembl

Ensembl Acc Id:

ENSSTOT00000042333 ⟹ ENSSTOP00000024519

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936488	16,009,123 - 16,059,185 (+)	Ensembl

RefSeq Acc Id:

XM_005321304 ⟹ XP_005321361

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	16,009,771 - 16,059,922 (-)	NCBI
SpeTri2.0	NW_004936488	16,009,083 - 16,058,640 (+)	NCBI

Sequence:

show sequence

CTCAGCGCTGCCCGGGTGTCGTTTTCCTGGAGCCGCCATTCTCACATGCACATTTGCTCTTTTT
CCCTTAGAGTGCCATTAAGGGGAAATTGCAAGAATTAGGAGCTTACGTTGATGAAGAACTTCCT
GATTACATTATGGTGATGGTGGCCAACAAGAAAAGTCAGGACCAAATGACAGAGGACCTGTCCC
TGTTTCTAGGGAACAACACAATTCGATTCACCGTATGGCTTCATGGTGTATTAGATAAACTTCG
CTCTGTTACAACTGAACCCACTAGTCTAAAGTCTTCTGATACCAACATTTTCGATAGTAACGTG
CCTTCAAACAAGAGCAGTTTCAGTCGGGGAGATGAGAGAAGGCACGAAGCTGCAGTATCTCCCC
TTGCCATTTCTAGCAGTAGACCTGAAAAAAGAGATTCCAGGGTTTCTGCAGGTTCACAGGAACA
GAAAACCACAAATACCAGACAGACTTATGATGAAGGAGCTTCAACCCGACTAATGTCAACAGTG
AAACCTCTGAGGGAGCCAGCACCCTCTGAAGATGTGATTGATATTAAGCCAGAACCAGATGATC
TCATTGATGAAGACCTCAATTTTGTGCAGGAGAATCCCTTATCTCAGAAAAAACCTATAGTGAC
ACTTACGTATGGTTCTTCTCGACCTTCCATTGAAATTTATCGACCACCTGCAAGTCGAAATGCA
GATAGTGGTGCTCATTTAAACAGGTTGCAGTTTCAGCAGCAGCAAAACAGTATTCATGCTGCCA
AGCAACTTGATGTACAGAACAACCGGGTGTATGAAACAGGACATTTGTGTGAACCAGAAGTGCT
TAACAATTTAGAAGAGACTTATAGTCCCTTCTTCAGAAACAACTCAGAAAAAATGAGTATTGAG
GATGAAAACTTTCGGAAGAGAAAGTTGCCTGTGGTGAGTTCAGTTGTTAAAGTAAAAAAGTTCA
ATCACGATGGAGAAGAGGAGGAGGAAGATGATGATTATGGCTCCCGAACCGGAAGCGTGTCCAG
CAGTGTATCTGTGCCAGCAAAGCCTGAAAGGAGACCTTCTCTTCCACCTTCTAAACAAGCCAAC
AAGAATCTAATTTTGAAGGCTATATCTGAAGCTCAAGAATCAGTAACAAAAACAACTAACTATT
CTGCAGTCCCACAGAAACAGACACTTCCAGTTGCTCCAAGAACTCGAACTTCTCAGGAAGAATT
GTTAGCAGAAGTAGTCCAGGGGCAAAGCAGGACCTCCAGAATAAGTTCCCCCATTAAAGAAGAG
GAAGCAAAAGGAGATAATATAGAAAAAAATCAAGGAACTCAACAGAGGCAATTATTATCCCGAC
TGCAAATTGACCCAGTAATGGCAGAAACACTGCAGATCAGTCAAGCTGAGATGAGTGAACTGAG
TGTGGTACAAAAACCAGAAAAGCTTTTGGAGCGCTGCAAGTACTGGCCTGCTTGTAAAAATGGG
GATGAATGTGCATACCATCATCCGATTTCACCTTGCAAAGCCTTCCCCAATTGTAAATTTGCTG
AAAAATGTTTGTTTGTTCATCCAAATTGTAAATTTGATGCAAAGTGTACTAAGCCAGATTGTCC
CTTTACTCATATGAGTAGAAGAATTCCAGTACTGCCTCCAAAACCAGCAGTTACAACACCAACA
CCATCTTCTAGTAGTCAGCTCTGCCGTTACTTCCCAGCATGTAAGAAAATGGAATGTCCCTTCT
ACCATCCAAAACACTGTAGATTTAACACTCAGTGTACAAGACCGGACTGTACATTCTATCATCC
CACCATTACTGTACCACCAAGACATGCCTTGAAATGGATTCGACCTCAAACCAGTGAATGACGC
CCAGTCCTATCTGGTGGAAGATCATGCAGTTTGAAAGGTTCCATCTACTGATGAAAGATAATTC
TACAGAATTTGTCGAATCTTTGAAACTTGGAATATATTGCTTTCATAACATGAAGTTTATTGTC
TA

hide sequence

RefSeq Acc Id:

XM_005321305 ⟹ XP_005321362

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	16,009,771 - 16,059,922 (-)	NCBI
SpeTri2.0	NW_004936488	16,009,082 - 16,058,642 (+)	NCBI

Sequence:

show sequence

CCTCAGCGCTGCCCGGGTGTCGTTTTCCTGGAGCCGCCATTCTCACATGCACATTTGCTCTTTT
TCCCTTAGAGTGCCATTAAGGGGAAATTGCAAGAATTAGGAGCTTACGTTGATGAAGAACTTCC
TGATTACATTATGGTGATGGTGGCCAACAAGAAAAGTCAGGACCAAATGACAGAGGACCTGTCC
CTGTTTCTAGGGAACAACACAATTCGATTCACCGTATGGCTTCATGGTGTATTAGATAAACTTC
GCTCTGTTACAACTGAACCCACTAGTCTAAAGTCTTCTGATACCAACATTTTCGATAGTAACGT
GCCTTCAAACAAGAGCAGTTTCAGTCGGGGAGATGAGAGAAGGCACGAAGCTGCAGTATCTCCC
CTTGCCATTTCTAGCAGTAGACCTGAAAAAAGAGATTCCAGGGTTTCTGCAGGTTCACAGGAAC
AGAAAACCACAAATACCAGACAGACTTATGATGAAGGAGCTTCAACCCGACTAATGTCAACAGT
GAAACCTCTGAGGGAGCCAGCACCCTCTGAAGATGTGATTGATATTAAGCCAGAACCAGATGAT
CTCATTGATGAAGACCTCAATTTTGTGCAGGAGAATCCCTTATCTCAGAAAAAACCTATAGTGA
CACTTACGTATGGTTCTTCTCGACCTTCCATTGAAATTTATCGACCACCTGCAAGTCGAAATGC
AGATAGTGGTGCTCATTTAAACAGGTTGCAGTTTCAGCAGCAGCAAAACAGTATTCATGCTGCC
AAGCAACTTGATGTACAGAACAACCGGGTGTATGAAACAGGACATTTGTGTGAACCAGAAGTGC
TTAACAATTTAGAAGAGACTTATAGTCCCTTCTTCAGAAACAACTCAGAAAAAATGAGTATTGA
GGATGAAAACTTTCGGAAGAGAAAGTTGCCTGTGGTGAGTTCAGTTGTTAAAGTAAAAAAGTTC
AATCACGATGGAGAAGAGGAGGAGGAAGATGATGATTATGGCTCCCGAACCGGAAGCGTGTCCA
GCAGTGTATCTGTGCCAGCAAAGCCTGAAAGGAGACCTTCTCTTCCACCTTCTAAACAAGCCAA
CAAGAATCTAATTTTGAAGGCTATATCTGAAGCTCAAGAATCAGTAACAAAAACAACTAACTAT
TCTGCAGTCCCACAGAAACAGACACTTCCAGTTGCTCCAAGAACTCGAACTTCTCAGGAAGAAT
TGTTAGCAGAAGTAGTCCAGGGGCAAAGCAGGACCTCCAGAATAAGTTCCCCCATTAAAGAAGA
GGAAGCAAAAGGAGATAATATAGAAAAAAATCAAGGAACTCAACAGAGGCAATTATTATCCCGA
CTGCAAATTGACCCAGTAATGGCAGAAACACTGCAGATCAGTCAAGATTACTATGACATGGAAT
CCATGGTCCATGCAGACACAAGATCATTTATTCTGAAGAAGCCAAAGCTGTCTGAGGAAATAGT
AGTGGCACCAAACCAAGAGTCGGGGATGAAGACTGCAGATACCCTTCGGGTACTTTCAGGACAC
CTTATGCAGACACGAGATCTTGTACAACCAGATAAACCTGCAAGTCCCAAGTTTATAGTGACGC
TGGATGGTGTCCCCAGCCCCCCAGGATACATGTCAGATCAAGAGGAGGACATGTGCTTTGAAGG
AATGAAACCCGTAAACCAAACTGCAGCCTCAAACAAGGGACTCAAAGGTCTCCTCCACCCACAG
CAGTTGCAGTTGATGAGCAGGCAGCTTGGTGACCCAGATGGTAGCTTTTCCTACGCTGAGATGA
GTGAACTGAGTGTGGTACAAAAACCAGAAAAGCTTTTGGAGCGCTGCAAGTACTGGCCTGCTTG
TAAAAATGGGGATGAATGTGCATACCATCATCCGATTTCACCTTGCAAAGCCTTCCCCAATTGT
AAATTTGCTGAAAAATGTTTGTTTGTTCATCCAAATTGTAAATTTGATGCAAAGTGTACTAAGC
CAGATTGTCCCTTTACTCATATGAGTAGAAGAATTCCAGTACTGCCTCCAAAACCAGCAGTTAC
AACACCAACACCATCTTCTAGTAGTCAGCTCTGCCGTTACTTCCCAGCATGTAAGAAAATGGAA
TGTCCCTTCTACCATCCAAAACACTGTAGATTTAACACTCAGTGTACAAGACCGGACTGTACAT
TCTATCATCCCACCATTACTGTACCACCAAGACATGCCTTGAAATGGATTCGACCTCAAACCAG
TGAATGACGCCCAGTCCTATCTGGTGGAAGATCATGCAGTTTGAAAGGTTCCATCTACTGATGA
AAGATAATTCTACAGAATTTGTCGAATCTTTGAAACTTGGAATATATTGCTTTCATAACATGAA
GTTTATTGTCTATC

hide sequence

RefSeq Acc Id:

XM_013356826 ⟹ XP_013212280

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	16,009,771 - 16,059,922 (-)	NCBI
SpeTri2.0	NW_004936488	16,009,081 - 16,058,640 (+)	NCBI

Sequence:

show sequence

ACCTCAGCGCTGCCCGGGTGTCGTTTTCCTGGAGCCGCCATTCTCACATGCACATTTGCTCTTT
TTCCCTTAGAGTGCCATTAAGGGGAAATTGCAAGAATTAGGAGCTTACGTTGATGAAGAACTTC
CTGATTACATTATGGTGATGGTGGCCAACAAGAAAAGTCAGGACCAAATGACAGAGGACCTGTC
CCTGTTTCTAGGGAACAACACAATTCGATTCACCGTATGGCTTCATGGTGTATTAGATAAACTT
CGCTCTGTTACAACTGAACCCACTAGTCTAAAGTCTTCTGATACCAACATTTTCGATAGTAACG
TGCCTTCAAACAAGAGCAGTTTCAGTCGGGGAGATGAGAGAAGGCACGAAGCTGCAGTATCTCC
CCTTGCCATTTCTAGCAGTAGACCTGAAAAAAGAGATTCCAGGGTTTCTGCAGGTTCACAGGAA
CAGAAAACCACAAATACCAGACAGACTTATGATGAAGGAGCTTCAACCCGACTAATGTCAACAG
TGAAACCTCTGAGGGAGCCAGCACCCTCTGAAGATGTGATTGATATTAAGCCAGAACCAGATGA
TCTCATTGATGAAGACCTCAATTTTGTGCAGGAGAATCCCTTATCTCAGAAAAAACCTATAGTG
ACACTTACGTATGGTTCTTCTCGACCTTCCATTGAAATTTATCGACCACCTGCAAGTCGAAATG
CAGATAGTGGTGCTCATTTAAACAGGTTGCAGTTTCAGCAGCAGCAAAACAGTATTCATGCTGC
CAAGCAACTTGATGTACAGAACAACCGGGTGTATGAAACAGGACATTTGTGTGAACCAGAAGTG
CTTAACAATTTAGAAGAGACTTATAGTCCCTTCTTCAGAAACAACTCAGAAAAAATGAGTATTG
AGGATGAAAACTTTCGGAAGAGAAAGTTGCCTGTGGTGAGTTCAGTTGTTAAAGTAAAAAAGTT
CAATCACGATGGAGAAGAGGAGGAGGAAGATGATGATTATGGCTCCCGAACCGGAAGCGTGTCC
AGCAGTGTATCTGTGCCAGCAAAGCCTGAAAGGAGACCTTCTCTTCCACCTTCTAAACAAGCCA
ACAAGAATCTAATTTTGAAGGCTATATCTGAAGCTCAAGAATCAGTAACAAAAACAACTAACTA
TTCTGCAGTCCCACAGAAACAGACACTTCCAGTTGCTCCAAGAACTCGAACTTCTCAGGAAGAA
TTGTTAGCAGAAGTAGTCCAGGGGCAAAGCAGGACCTCCAGAATAAGTTCCCCCATTAAAGAAG
AGGAAGCAAAAGGAGATAATATAGAAAAAAATCAAGGAACTCAACAGAGGCAATTATTATCCCG
ACTGCAAATTGACCCAGTAATGGCAGAAACACTGCAGATCAGTCAAGATTACTATGACATGGAA
TCCATGGTCCATGCAGACACAAGATCATTTATTCTGAAGAAGCCAAAGCTGTCTGAGGAAATAG
TAGTGGCACCAAACCAAGAGTCGGGGATGAAGACTGCAGATACCCTTCGGGTACTTTCAGGACA
CCTTATGCAGACACGAGATCTTGTACAACCAGATAAACCTGCAAGTCCCAAGTTTATAGTGACG
CTGGATGGTGTCCCCAGCCCCCCAGGATACATGTCAGATCAAGAGGAGGACATGTGCTTTGAAG
GAATGAAACCCGTAAACCAAACTGCAGCCTCAAACAAGGGACTCAAAGGTCTCCTCCACCCACA
GCAGTTGCAGTTGATGAGCAGGCAGCTTGGTGACCCAGATGGTAGCTTTTCCTACGCTGAGATG
AGTGAACTGAGTGTGGTACAAAAACCAGAAAAGCTTTTGGAGCGCTGCAAGTACTGGCCTGCTT
GTAAAAATGGGGATGAATGTGCATACCATCATCCGATTTCACCTTGCAAAGCCTTCCCCAATTG
TAAATTTGCTGAAAAATGTTTGTTTGTTCATCCAAATTGTAAATTTGATGCAAAGTGTACTAAG
CCAGATTGTCCCTTTACTCATATGAGTAGAAGAATTCCAGTACTGCCTCCAAAACCAGTTACAA
CACCAACACCATCTTCTAGTAGTCAGCTCTGCCGTTACTTCCCAGCATGTAAGAAAATGGAATG
TCCCTTCTACCATCCAAAACACTGTAGATTTAACACTCAGTGTACAAGACCGGACTGTACATTC
TATCATCCCACCATTACTGTACCACCAAGACATGCCTTGAAATGGATTCGACCTCAAACCAGTG
AATGACGCCCAGTCCTATCTGGTGGAAGATCATGCAGTTTGAAAGGTTCCATCTACTGATGAAA
GATAATTCTACAGAATTTGTCGAATCTTTGAAACTTGGAATATATTGCTTTCATAACATGAAGT
TTATTGTCTA

hide sequence

RefSeq Acc Id:

XM_013356828 ⟹ XP_013212282

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	16,009,771 - 16,059,922 (-)	NCBI
SpeTri2.0	NW_004936488	16,009,082 - 16,058,640 (+)	NCBI

Sequence:

show sequence

CCTCAGCGCTGCCCGGGTGTCGTTTTCCTGGAGCCGCCATTCTCACATGCACATTTGCTCTTTT
TCCCTTAGAGTGCCATTAAGGGGAAATTGCAAGAATTAGGAGCTTACGTTGATGAAGAACTTCC
TGATTACATTATGGTGATGGTGGCCAACAAGAAAAGTCAGGACCAAATGACAGAGGACCTGTCC
CTGTTTCTAGGGAACAACACAATTCGATTCACCGTATGGCTTCATGGTGTATTAGATAAACTTC
GCTCTGTTACAACTGAACCCACTAGTCTAAAGTCTTCTGATACCAACATTTTCGATAGTAACGT
GCCTTCAAACAAGAGCAGTTTCAGTCGGGGAGATGAGAGAAGGCACGAAGCTGCAGTATCTCCC
CTTGCCATTTCTAGCAGTAGACCTGAAAAAAGAGATTCCAGGGTTTCTGCAGGTTCACAGGAAC
AGAAAACCACAAATACCAGACAGACTTATGATGAAGGAGCTTCAACCCGACTAATGTCAACAGT
GAAACCTCTGAGGGAGCCAGCACCCTCTGAAGATGTGATTGATATTAAGCCAGAACCAGATGAT
CTCATTGATGAAGACCTCAATTTTGTGCAGGAGAATCCCTTATCTCAGAAAAAACCTATAGTGA
CACTTACGTATGGTTCTTCTCGACCTTCCATTGAAATTTATCGACCACCTGCAAGTCGAAATGC
AGATAGTGGTGCTCATTTAAACAGGTTGCAGTTTCAGCAGCAGCAAAACAGTATTCATGCTGCC
AAGCAACTTGATGTACAGAACAACCGGGTGTATGAAACAGGACATTTGTGTGAACCAGAAGTGC
TTAACAATTTAGAAGAGACTTATAGTCCCTTCTTCAGAAACAACTCAGAAAAAATGAGTATTGA
GGATGAAAACTTTCGGAAGAGAAAGTTGCCTGTGGTGAGTTCAGTTGTTAAAGTAAAAAAGTTC
AATCACGATGGAGAAGAGGAGGAGGAAGATGATGATTATGGCTCCCGAACCGGAAGCGTGTCCA
GCAGTGTATCTGTGCCAGCAAAGCCTGAAAGGAGACCTTCTCTTCCACCTTCTAAACAAGCCAA
CAAGAATCTAATTTTGAAGGCTATATCTGAAGCTCAAGAATCAGTAACAAAAACAACTAACTAT
TCTGCAGTCCCACAGAAACAGACACTTCCAGTTGCTCCAAGAACTCGAACTTCTCAGGAAGAAT
TGTTAGCAGAAGTAGTCCAGGGGCAAAGCAGGACCTCCAGAATAAGTTCCCCCATTAAAGAAGA
GGAAGCAAAAGGAGATAATATAGAAAAAAATCAAGGAACTCAACAGAGGCAATTATTATCCCGA
CTGCAAATTGACCCAGTAATGGCAGAAACACTGCAGATCAGTCAAGCTGAGATGAGTGAACTGA
GTGTGGTACAAAAACCAGAAAAGCTTTTGGAGCGCTGCAAGTACTGGCCTGCTTGTAAAAATGG
GGATGAATGTGCATACCATCATCCGATTTCACCTTGCAAAGCCTTCCCCAATTGTAAATTTGCT
GAAAAATGTTTGTTTGTTCATCCAAATTGTAAATTTGATGCAAAGTGTACTAAGCCAGATTGTC
CCTTTACTCATATGAGTAGAAGAATTCCAGTACTGCCTCCAAAACCAGTTACAACACCAACACC
ATCTTCTAGTAGTCAGCTCTGCCGTTACTTCCCAGCATGTAAGAAAATGGAATGTCCCTTCTAC
CATCCAAAACACTGTAGATTTAACACTCAGTGTACAAGACCGGACTGTACATTCTATCATCCCA
CCATTACTGTACCACCAAGACATGCCTTGAAATGGATTCGACCTCAAACCAGTGAATGACGCCC
AGTCCTATCTGGTGGAAGATCATGCAGTTTGAAAGGTTCCATCTACTGATGAAAGATAATTCTA
CAGAATTTGTCGAATCTTTGAAACTTGGAATATATTGCTTTCATAACATGAAGTTTATTGTCTA

hide sequence

RefSeq Acc Id:

XM_021723832 ⟹ XP_021579507

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	16,009,771 - 16,059,890 (-)	NCBI
SpeTri2.0	NW_004936488	16,009,081 - 16,058,640 (+)	NCBI

Sequence:

show sequence

ACCTCAGCGCTGCCCGGGTGTCGTTTTCCTGGAGCCGCCATTCTCACATGCACATTTGCTCTTT
TTCCCTTAGAGTGCCATTAAGGGGAAATTGCAAGAATTAGGAGCTTACGTTGGCTTCATGGTGT
ATTAGATAAACTTCGCTCTGTTACAACTGAACCCACTAGTCTAAAGTCTTCTGATACCAACATT
TTCGATAGTAACGTGCCTTCAAACAAGAGCAGTTTCAGTCGGGGAGATGAGAGAAGGCACGAAG
CTGCAGTATCTCCCCTTGCCATTTCTAGCAGTAGACCTGAAAAAAGAGATTCCAGGGTTTCTGC
AGGTTCACAGGAACAGAAAACCACAAATACCAGACAGACTTATGATGAAGGAGCTTCAACCCGA
CTAATGTCAACAGTGAAACCTCTGAGGGAGCCAGCACCCTCTGAAGATGTGATTGATATTAAGC
CAGAACCAGATGATCTCATTGATGAAGACCTCAATTTTGTGCAGGAGAATCCCTTATCTCAGAA
AAAACCTATAGTGACACTTACGTATGGTTCTTCTCGACCTTCCATTGAAATTTATCGACCACCT
GCAAGTCGAAATGCAGATAGTGGTGCTCATTTAAACAGGTTGCAGTTTCAGCAGCAGCAAAACA
GTATTCATGCTGCCAAGCAACTTGATGTACAGAACAACCGGGTGTATGAAACAGGACATTTGTG
TGAACCAGAAGTGCTTAACAATTTAGAAGAGACTTATAGTCCCTTCTTCAGAAACAACTCAGAA
AAAATGAGTATTGAGGATGAAAACTTTCGGAAGAGAAAGTTGCCTGTGGTGAGTTCAGTTGTTA
AAGTAAAAAAGTTCAATCACGATGGAGAAGAGGAGGAGGAAGATGATGATTATGGCTCCCGAAC
CGGAAGCGTGTCCAGCAGTGTATCTGTGCCAGCAAAGCCTGAAAGGAGACCTTCTCTTCCACCT
TCTAAACAAGCCAACAAGAATCTAATTTTGAAGGCTATATCTGAAGCTCAAGAATCAGTAACAA
AAACAACTAACTATTCTGCAGTCCCACAGAAACAGACACTTCCAGTTGCTCCAAGAACTCGAAC
TTCTCAGGAAGAATTGTTAGCAGAAGTAGTCCAGGGGCAAAGCAGGACCTCCAGAATAAGTTCC
CCCATTAAAGAAGAGGAAGCAAAAGGAGATAATATAGAAAAAAATCAAGGAACTCAACAGAGGC
AATTATTATCCCGACTGCAAATTGACCCAGTAATGGCAGAAACACTGCAGATCAGTCAAGATTA
CTATGACATGGAATCCATGGTCCATGCAGACACAAGATCATTTATTCTGAAGAAGCCAAAGCTG
TCTGAGGAAATAGTAGTGGCACCAAACCAAGAGTCGGGGATGAAGACTGCAGATACCCTTCGGG
TACTTTCAGGACACCTTATGCAGACACGAGATCTTGTACAACCAGATAAACCTGCAAGTCCCAA
GTTTATAGTGACGCTGGATGGTGTCCCCAGCCCCCCAGGATACATGTCAGATCAAGAGGAGGAC
ATGTGCTTTGAAGGAATGAAACCCGTAAACCAAACTGCAGCCTCAAACAAGGGACTCAAAGGTC
TCCTCCACCCACAGCAGTTGCAGTTGATGAGCAGGCAGCTTGGTGACCCAGATGGTAGCTTTTC
CTACGCTGAGATGAGTGAACTGAGTGTGGTACAAAAACCAGAAAAGCTTTTGGAGCGCTGCAAG
TACTGGCCTGCTTGTAAAAATGGGGATGAATGTGCATACCATCATCCGATTTCACCTTGCAAAG
CCTTCCCCAATTGTAAATTTGCTGAAAAATGTTTGTTTGTTCATCCAAATTGTAAATTTGATGC
AAAGTGTACTAAGCCAGATTGTCCCTTTACTCATATGAGTAGAAGAATTCCAGTACTGCCTCCA
AAACCAGCAGTTACAACACCAACACCATCTTCTAGTAGTCAGCTCTGCCGTTACTTCCCAGCAT
GTAAGAAAATGGAATGTCCCTTCTACCATCCAAAACACTGTAGATTTAACACTCAGTGTACAAG
ACCGGACTGTACATTCTATCATCCCACCATTACTGTACCACCAAGACATGCCTTGAAATGGATT
CGACCTCAAACCAGTGAATGACGCCCAGTCCTATCTGGTGGAAGATCATGCAGTTTGAAAGGTT
CCATCTACTGATGAAAGATAATTCTACAGAATTTGTCGAATCTTTGAAACTTGGAATATATTGC
TTTCATAACATGAAGTTTATTGTCTA

hide sequence

RefSeq Acc Id:

XM_040274574 ⟹ XP_040130508

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	16,009,771 - 16,059,922 (-)	NCBI

RefSeq Acc Id:

XM_040274576 ⟹ XP_040130510

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	16,009,771 - 16,059,922 (-)	NCBI

RefSeq Acc Id:

XM_040274577 ⟹ XP_040130511

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	16,009,771 - 16,052,631 (-)	NCBI

RefSeq Acc Id:

XM_040274578 ⟹ XP_040130512

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	16,009,771 - 16,059,922 (-)	NCBI

RefSeq Acc Id:

XM_040274579 ⟹ XP_040130513

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	16,009,771 - 16,059,922 (-)	NCBI

RefSeq Acc Id:

XM_040274580 ⟹ XP_040130514

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	16,009,213 - 16,025,766 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_005321361	(Get FASTA)	NCBI Sequence Viewer
	XP_005321362	(Get FASTA)	NCBI Sequence Viewer
	XP_013212280	(Get FASTA)	NCBI Sequence Viewer
	XP_013212282	(Get FASTA)	NCBI Sequence Viewer
	XP_021579507	(Get FASTA)	NCBI Sequence Viewer
	XP_040130508	(Get FASTA)	NCBI Sequence Viewer
	XP_040130510	(Get FASTA)	NCBI Sequence Viewer
	XP_040130511	(Get FASTA)	NCBI Sequence Viewer
	XP_040130512	(Get FASTA)	NCBI Sequence Viewer
	XP_040130513	(Get FASTA)	NCBI Sequence Viewer
	XP_040130514	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000011821.3
	ENSSTOP00000024271.1
	ENSSTOP00000024519.1
	ENSSTOP00000028576.1
GenBank Protein	KAG3260553	(Get FASTA)	NCBI Sequence Viewer
	KAG3260554	(Get FASTA)	NCBI Sequence Viewer
	KAG3260555	(Get FASTA)	NCBI Sequence Viewer
	KAG3260556	(Get FASTA)	NCBI Sequence Viewer
	KAG3260557	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_013212282 ⟸ XM_013356828
- Peptide Label:	isoform X7
- UniProtKB:	A0A287CTB3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVMVANKKSQDQMTEDLSLFLGNNTIRFTVWLHGVLDKLRSVTTEPTSLKSSDTNIFDSNVPSN KSSFSRGDERRHEAAVSPLAISSSRPEKRDSRVSAGSQEQKTTNTRQTYDEGASTRLMSTVKPL REPAPSEDVIDIKPEPDDLIDEDLNFVQENPLSQKKPIVTLTYGSSRPSIEIYRPPASRNADSG AHLNRLQFQQQQNSIHAAKQLDVQNNRVYETGHLCEPEVLNNLEETYSPFFRNNSEKMSIEDEN FRKRKLPVVSSVVKVKKFNHDGEEEEEDDDYGSRTGSVSSSVSVPAKPERRPSLPPSKQANKNL ILKAISEAQESVTKTTNYSAVPQKQTLPVAPRTRTSQEELLAEVVQGQSRTSRISSPIKEEEAK GDNIEKNQGTQQRQLLSRLQIDPVMAETLQISQAEMSELSVVQKPEKLLERCKYWPACKNGDEC AYHHPISPCKAFPNCKFAEKCLFVHPNCKFDAKCTKPDCPFTHMSRRIPVLPPKPVTTPTPSSS SQLCRYFPACKKMECPFYHPKHCRFNTQCTRPDCTFYHPTITVPPRHALKWIRPQTSE hide sequence

RefSeq Acc Id:	XP_013212280 ⟸ XM_013356826
- Peptide Label:	isoform X2
- UniProtKB:	I3MKJ1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVMVANKKSQDQMTEDLSLFLGNNTIRFTVWLHGVLDKLRSVTTEPTSLKSSDTNIFDSNVPSN KSSFSRGDERRHEAAVSPLAISSSRPEKRDSRVSAGSQEQKTTNTRQTYDEGASTRLMSTVKPL REPAPSEDVIDIKPEPDDLIDEDLNFVQENPLSQKKPIVTLTYGSSRPSIEIYRPPASRNADSG AHLNRLQFQQQQNSIHAAKQLDVQNNRVYETGHLCEPEVLNNLEETYSPFFRNNSEKMSIEDEN FRKRKLPVVSSVVKVKKFNHDGEEEEEDDDYGSRTGSVSSSVSVPAKPERRPSLPPSKQANKNL ILKAISEAQESVTKTTNYSAVPQKQTLPVAPRTRTSQEELLAEVVQGQSRTSRISSPIKEEEAK GDNIEKNQGTQQRQLLSRLQIDPVMAETLQISQDYYDMESMVHADTRSFILKKPKLSEEIVVAP NQESGMKTADTLRVLSGHLMQTRDLVQPDKPASPKFIVTLDGVPSPPGYMSDQEEDMCFEGMKP VNQTAASNKGLKGLLHPQQLQLMSRQLGDPDGSFSYAEMSELSVVQKPEKLLERCKYWPACKNG DECAYHHPISPCKAFPNCKFAEKCLFVHPNCKFDAKCTKPDCPFTHMSRRIPVLPPKPVTTPTP SSSSQLCRYFPACKKMECPFYHPKHCRFNTQCTRPDCTFYHPTITVPPRHALKWIRPQTSE hide sequence

RefSeq Acc Id:	XP_005321362 ⟸ XM_005321305
- Peptide Label:	isoform X1
- UniProtKB:	I3MKJ1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVMVANKKSQDQMTEDLSLFLGNNTIRFTVWLHGVLDKLRSVTTEPTSLKSSDTNIFDSNVPSN KSSFSRGDERRHEAAVSPLAISSSRPEKRDSRVSAGSQEQKTTNTRQTYDEGASTRLMSTVKPL REPAPSEDVIDIKPEPDDLIDEDLNFVQENPLSQKKPIVTLTYGSSRPSIEIYRPPASRNADSG AHLNRLQFQQQQNSIHAAKQLDVQNNRVYETGHLCEPEVLNNLEETYSPFFRNNSEKMSIEDEN FRKRKLPVVSSVVKVKKFNHDGEEEEEDDDYGSRTGSVSSSVSVPAKPERRPSLPPSKQANKNL ILKAISEAQESVTKTTNYSAVPQKQTLPVAPRTRTSQEELLAEVVQGQSRTSRISSPIKEEEAK GDNIEKNQGTQQRQLLSRLQIDPVMAETLQISQDYYDMESMVHADTRSFILKKPKLSEEIVVAP NQESGMKTADTLRVLSGHLMQTRDLVQPDKPASPKFIVTLDGVPSPPGYMSDQEEDMCFEGMKP VNQTAASNKGLKGLLHPQQLQLMSRQLGDPDGSFSYAEMSELSVVQKPEKLLERCKYWPACKNG DECAYHHPISPCKAFPNCKFAEKCLFVHPNCKFDAKCTKPDCPFTHMSRRIPVLPPKPAVTTPT PSSSSQLCRYFPACKKMECPFYHPKHCRFNTQCTRPDCTFYHPTITVPPRHALKWIRPQTSE hide sequence

RefSeq Acc Id:	XP_005321361 ⟸ XM_005321304
- Peptide Label:	isoform X6
- UniProtKB:	A0A287CTB3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVMVANKKSQDQMTEDLSLFLGNNTIRFTVWLHGVLDKLRSVTTEPTSLKSSDTNIFDSNVPSN KSSFSRGDERRHEAAVSPLAISSSRPEKRDSRVSAGSQEQKTTNTRQTYDEGASTRLMSTVKPL REPAPSEDVIDIKPEPDDLIDEDLNFVQENPLSQKKPIVTLTYGSSRPSIEIYRPPASRNADSG AHLNRLQFQQQQNSIHAAKQLDVQNNRVYETGHLCEPEVLNNLEETYSPFFRNNSEKMSIEDEN FRKRKLPVVSSVVKVKKFNHDGEEEEEDDDYGSRTGSVSSSVSVPAKPERRPSLPPSKQANKNL ILKAISEAQESVTKTTNYSAVPQKQTLPVAPRTRTSQEELLAEVVQGQSRTSRISSPIKEEEAK GDNIEKNQGTQQRQLLSRLQIDPVMAETLQISQAEMSELSVVQKPEKLLERCKYWPACKNGDEC AYHHPISPCKAFPNCKFAEKCLFVHPNCKFDAKCTKPDCPFTHMSRRIPVLPPKPAVTTPTPSS SSQLCRYFPACKKMECPFYHPKHCRFNTQCTRPDCTFYHPTITVPPRHALKWIRPQTSE hide sequence

RefSeq Acc Id:	XP_021579507 ⟸ XM_021723832
- Peptide Label:	isoform X5
- UniProtKB:	I3MKJ1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSTVKPLREPAPSEDVIDIKPEPDDLIDEDLNFVQENPLSQKKPIVTLTYGSSRPSIEIYRPPA SRNADSGAHLNRLQFQQQQNSIHAAKQLDVQNNRVYETGHLCEPEVLNNLEETYSPFFRNNSEK MSIEDENFRKRKLPVVSSVVKVKKFNHDGEEEEEDDDYGSRTGSVSSSVSVPAKPERRPSLPPS KQANKNLILKAISEAQESVTKTTNYSAVPQKQTLPVAPRTRTSQEELLAEVVQGQSRTSRISSP IKEEEAKGDNIEKNQGTQQRQLLSRLQIDPVMAETLQISQDYYDMESMVHADTRSFILKKPKLS EEIVVAPNQESGMKTADTLRVLSGHLMQTRDLVQPDKPASPKFIVTLDGVPSPPGYMSDQEEDM CFEGMKPVNQTAASNKGLKGLLHPQQLQLMSRQLGDPDGSFSYAEMSELSVVQKPEKLLERCKY WPACKNGDECAYHHPISPCKAFPNCKFAEKCLFVHPNCKFDAKCTKPDCPFTHMSRRIPVLPPK PAVTTPTPSSSSQLCRYFPACKKMECPFYHPKHCRFNTQCTRPDCTFYHPTITVPPRHALKWIR PQTSE hide sequence

RefSeq Acc Id:	XP_040130514 ⟸ XM_040274580
- Peptide Label:	isoform X10
- UniProtKB:	A0A287D4Q8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040130513 ⟸ XM_040274579
- Peptide Label:	isoform X9
- UniProtKB:	A0A287CSK3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040130512 ⟸ XM_040274578
- Peptide Label:	isoform X8
- UniProtKB:	A0A287CSK3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040130510 ⟸ XM_040274576
- Peptide Label:	isoform X4
- UniProtKB:	I3MKJ1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040130508 ⟸ XM_040274574
- Peptide Label:	isoform X3
- UniProtKB:	I3MKJ1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040130511 ⟸ XM_040274577
- Peptide Label:	isoform X5
- UniProtKB:	I3MKJ1 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSSTOP00000024519 ⟸ ENSSTOT00000042333

Ensembl Acc Id:

ENSSTOP00000011821 ⟸ ENSSTOT00000013189

Ensembl Acc Id:

ENSSTOP00000024271 ⟸ ENSSTOT00000036483

Ensembl Acc Id:

ENSSTOP00000028576 ⟸ ENSSTOT00000039162

Protein Domains

C3H1-type

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000013176	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000013189.3	UniProtKB/TrEMBL
	ENSSTOT00000036483.1	UniProtKB/TrEMBL
	ENSSTOT00000039162.1	UniProtKB/TrEMBL
	ENSSTOT00000042333.1	UniProtKB/TrEMBL
Gene3D-CATH	4.10.1000.30	UniProtKB/TrEMBL
	4.10.1000.40	UniProtKB/TrEMBL
InterPro	Nab2/ZC3H14	UniProtKB/TrEMBL
	Znf_CCCH	UniProtKB/TrEMBL
NCBI Gene	Zc3h14	ENTREZGENE
PANTHER	PTHR14738	UniProtKB/TrEMBL
	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 14	UniProtKB/TrEMBL
Pfam	zf-CCCH_2	UniProtKB/TrEMBL
PROSITE	ZF_C3H1	UniProtKB/TrEMBL
SMART	ZnF_C3H1	UniProtKB/TrEMBL
UniProt	A0A287CSK3	ENTREZGENE, UniProtKB/TrEMBL
	A0A287CTB3	ENTREZGENE, UniProtKB/TrEMBL
	A0A287D4Q8	ENTREZGENE, UniProtKB/TrEMBL
	I3MKJ1	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM