| Symbol: |
LOC101974107 |
| Name: |
olfactory receptor 10Q1 |
| RGD ID: |
12448756 |
| Description: |
ASSOCIATED WITH intellectual disability (ortholog) |
| Type: |
protein-coding
|
| RefSeq Status: |
MODEL |
| RGD Orthologs |
|
| Alliance Orthologs |
|
| More Info |
more info ...
|
| More Info |
|
| Latest Assembly: |
SpeTri2.0 - Squirrel SpeTri2.0 Assembly |
| Position: |
|
| JBrowse: |
View Region in Genome Browser (JBrowse)
|
| Model |
|
LOC101974107
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
|
OR10Q1
(Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
| GRCh38 | 11 | 58,227,882 - 58,228,918 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | | GRCh38.p14 Ensembl | 11 | 58,227,882 - 58,228,918 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | | GRCh37 | 11 | 57,995,354 - 57,996,390 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | | Build 36 | 11 | 57,751,964 - 57,752,923 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | | Build 34 | 11 | 57,751,963 - 57,752,923 | NCBI | | | | | | Celera | 11 | 55,353,777 - 55,354,813 (-) | NCBI | | Celera | | | | Cytogenetic Map | 11 | q12.1 | NCBI | | | | | | HuRef | 11 | 54,343,153 - 54,344,189 (-) | NCBI | | HuRef | | | | CHM1_1 | 11 | 57,861,334 - 57,862,370 (-) | NCBI | | CHM1_1 | | | | T2T-CHM13v2.0 | 11 | 58,177,291 - 58,178,327 (-) | NCBI | | T2T-CHM13v2.0 | | |
|
Or10q1
(Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
| GRCm39 | 19 | 13,726,472 - 13,727,419 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | | GRCm39 Ensembl | 19 | 13,717,092 - 13,727,843 (+) | Ensembl | | GRCm39 Ensembl | | | | GRCm38 | 19 | 13,749,108 - 13,750,055 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | | GRCm38.p6 Ensembl | 19 | 13,739,728 - 13,750,479 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | | MGSCv37 | 19 | 13,823,598 - 13,824,545 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | | MGSCv36 | 19 | 13,816,127 - 13,817,074 (+) | NCBI | | MGSCv36 | mm8 | | | Celera | 19 | 14,421,009 - 14,421,956 (+) | NCBI | | Celera | | | | Cytogenetic Map | 19 | A | NCBI | | | | | | cM Map | 19 | 8.84 | NCBI | | | | |
|
Or10q1
(Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
| GRCr8 | 1 | 220,285,910 - 220,286,866 (+) | NCBI | | GRCr8 | | | | mRatBN7.2 | 1 | 210,861,364 - 210,862,320 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | | mRatBN7.2 Ensembl | 1 | 210,854,142 - 210,864,961 (+) | Ensembl | | mRatBN7.2 Ensembl | | | | UTH_Rnor_SHR_Utx | 1 | 219,235,751 - 219,236,707 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 1 | 226,127,023 - 226,127,979 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | | UTH_Rnor_WKY_Bbb_1.0 | 1 | 218,990,235 - 218,991,191 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | | Rnor_6.0 | 1 | 230,576,298 - 230,577,254 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | | Rnor_6.0 Ensembl | 1 | 230,576,298 - 230,577,254 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | | Rnor_5.0 | 1 | 237,714,076 - 237,715,032 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | | RGSC_v3.4 | 1 | 216,825,002 - 216,825,958 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | | RGSC_v3.1 | 1 | 216,986,199 - 216,987,156 (+) | NCBI | | | | | | Celera | 1 | 208,259,920 - 208,260,876 (+) | NCBI | | Celera | | | | Cytogenetic Map | 1 | q43 | NCBI | | | | |
|
LOC100968198
(Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
| NHGRI_mPanPan1-v2 | 9 | 59,441,621 - 59,461,159 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | | NHGRI_mPanPan1 | 11 | 60,467,725 - 60,487,271 (-) | NCBI | | NHGRI_mPanPan1 | | | | Mhudiblu_PPA_v0 | 11 | 53,532,245 - 53,558,370 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | | PanPan1.1 | 11 | 56,995,251 - 57,021,353 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | |
|
OR10Q1
(Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
| CanFam3.1 | 18 | 38,127,332 - 38,128,291 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | | CanFam3.1 Ensembl | 18 | 38,127,332 - 38,128,291 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | | Dog10K_Boxer_Tasha | 18 | 37,671,637 - 37,672,596 (+) | NCBI | | Dog10K_Boxer_Tasha | | | | ROS_Cfam_1.0 | 18 | 38,802,031 - 38,802,990 (+) | NCBI | | ROS_Cfam_1.0 | | | | ROS_Cfam_1.0 Ensembl | 18 | 38,802,031 - 38,802,990 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | | UMICH_Zoey_3.1 | 18 | 38,385,873 - 38,386,832 (+) | NCBI | | UMICH_Zoey_3.1 | | | | UNSW_CanFamBas_1.0 | 18 | 37,958,400 - 37,959,359 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | | UU_Cfam_GSD_1.0 | 18 | 38,585,573 - 38,586,532 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
LOC100512331
(Sus scrofa - pig) |
| Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
| Sscrofa11.1 Ensembl | 2 | 12,843,402 - 12,844,361 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | | Sscrofa11.1 | 2 | 12,843,402 - 12,844,641 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | | Sscrofa10.2 | 2 | 12,500,015 - 12,511,428 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
.
| RefSeq Acc Id: |
XM_005331674 ⟹ XP_005331731 |
| Type: |
CODING |
| Position: |
| Squirrel Assembly | Chr | Position (strand) | Source |
|---|
| HiC_Itri_2 | NW_024404947 | 14,375,375 - 14,376,366 (+) | NCBI | | SpeTri2.0 | NW_004936581 | 4,489,197 - 4,490,182 (+) | NCBI |
|
| Sequence: |
ATGTCGGCTTGGAGCCCTGGGCTCAACCAGTCCGGCCCCACCGAGTTCGTGTTCCGCGTGTTCACCGCTGTCCCTGCGCTCCGGGTCCTGCTCTTCCTCCTCTTCCTCCTTCTCTACTTGCTGATCCT
CTGCGGCAACACAGCCATCGTCTGCGTGGTGTGCACACACAGCTCGCTGCGCACCCCCATGTATTTCTTCCTGTCCACCCTGTCCTCCCTGGAAATCTGCTACACCTCTGTGGTGGTGCCCTTGATGC
TCTCTAACATTTGGGGGGCCCAGAAGCCCATCTCCTTAGCCGGCTGCGGGGCCCAGATGTTCTTCTTCGTCACCCTGGGCAGCACCGACTGCTTCCTCTTGGCCGTCATGGCCTACGATCGGTACGTG
GCCATCTGCCACCCGCTGCACTACACCCTCCTCATGACCCACAAGCTGTGCGTCCAGATGGTGGCGGGCTCCGTGGGCCTGGCCCTGGTCCTCTCGCTGCAGCTCACCGCCCTCATCTTCACCCTGCC
CTTCTGCGGGCGCCGCCGGGAGATCAACCACTTCCTCTGCGACGTGCCCCCGGTGCTGCGCCTGGCCTGTGCCGACATCCGCGTGCACCAGGCCGTGCTCTACGTCGTGGGCATCCTGGTGCTGACCG
TCCCCTTCCTGCTCATCTGCGTCTCCTACGTGTTCATCGCCTCCGCCATCCTGCGCATCCGTTCGGCCGAGGGCCGGCGCCGCGCCTTCTCCACCTGCTCCTCGCACCTCACCGTGGTCCTGCTGCAG
TACGGCTGCTGCAGCCTGGTCTACCTGCGGCCGCGGTCCAGCACCTCGGAGGACGAGGACCGCCAGATCGCCCTGGTCTACACCTTTGTTACCCCCTTACTCAACCCTTTGATTTATACCCTTAGGAA
CAAGGATGTGAAAGGTGCTCTGAGGCATGCCATCCTCAGTAAAGCAGCCCCTGAGTCCAGCTGAAGGCCCAGGGGTTGGGGTGGGCATCT
hide sequence
|
| RefSeq Acc Id: |
XP_005331731 ⟸ XM_005331674 |
| - Sequence: |
MSAWSPGLNQSGPTEFVFRVFTAVPALRVLLFLLFLLLYLLILCGNTAIVCVVCTHSSLRTPMYFFLSTLSSLEICYTSVVVPLMLSNIWGAQKPISLAGCGAQMFFFVTLGSTDCFLLAVMAYDRYV
AICHPLHYTLLMTHKLCVQMVAGSVGLALVLSLQLTALIFTLPFCGRRREINHFLCDVPPVLRLACADIRVHQAVLYVVGILVLTVPFLLICVSYVFIASAILRIRSAEGRRRAFSTCSSHLTVVLLQ
YGCCSLVYLRPRSSTSEDEDRQIALVYTFVTPLLNPLIYTLRNKDVKGALRHAILSKAAPESS
hide sequence
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