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Gene: MILR1 (mast cell immunoglobulin like receptor 1) Canis lupus familiaris

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Symbol:

MILR1

Name:

mast cell immunoglobulin like receptor 1

RGD ID:

12432723

Description:

INVOLVED IN mast cell degranulation (ortholog); negative regulation of mast cell activation (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); autosomal dominant progressive external ophthalmoplegia with mitochondrial DNA deletions 4 (ortholog); chronic progressive external ophthalmoplegia (ortholog); FOUND IN membrane (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

allergin-1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	12,251,085 - 12,266,608 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	12,251,186 - 12,266,605 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	13,147,361 - 13,162,884 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	13,914,010 - 13,929,519 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	13,914,111 - 13,929,516 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	12,860,140 - 12,875,655 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	14,657,301 - 14,672,826 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	14,658,477 - 14,674,027 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Acute Liver Failure (ISO)

autosomal dominant progressive external ophthalmoplegia with mitochondrial DNA deletions 4 (ISO)

chronic progressive external ophthalmoplegia (ISO)

COVID-19 (ISO)

hereditary spastic paraplegia (ISO)

hyperkalemic periodic paralysis (ISO)

mitochondrial DNA depletion syndrome 16 (ISO)

mitochondrial DNA depletion syndrome 16B (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell surface receptor signaling pathway (IBA)

immune response (IBA)

mast cell degranulation (ISO)

negative regulation of mast cell activation (ISO)

Cellular Component

external side of plasma membrane (IBA)

membrane (IEA)

Molecular Function

protein binding (ISO)

transmembrane signaling receptor activity (IBA)

References

Genomics

Comparative Map Data

MILR1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	12,251,085 - 12,266,608 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	12,251,186 - 12,266,605 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	13,147,361 - 13,162,884 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	13,914,010 - 13,929,519 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	13,914,111 - 13,929,516 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	12,860,140 - 12,875,655 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	14,657,301 - 14,672,826 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	14,658,477 - 14,674,027 (-)	NCBI		UU_Cfam_GSD_1.0

MILR1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	64,449,115 - 64,497,356 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	64,449,037 - 64,492,770 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	62,461,567 - 62,470,123 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	59,875,702 - 59,895,222 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	17	56,915,130 - 56,934,622 (+)	NCBI		Celera
Cytogenetic Map	17	q23.3	NCBI
HuRef	17	57,894,419 - 57,913,941 (+)	NCBI		HuRef
CHM1_1	17	62,525,491 - 62,528,684 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	17	65,318,873 - 65,366,741 (+)	NCBI		T2T-CHM13v2.0

Milr1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	106,641,472 - 106,659,620 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	106,642,052 - 106,659,620 (+)	Ensembl		GRCm39 Ensembl
GRCm38	11	106,750,646 - 106,768,794 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	106,751,226 - 106,768,794 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	106,612,582 - 106,628,882 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	106,567,358 - 106,583,658 (+)	NCBI		MGSCv36	mm8
Celera	11	118,482,507 - 118,498,788 (+)	NCBI		Celera
Cytogenetic Map	11	E1	NCBI
cM Map	11	70.0	NCBI

Milr1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	92,184,002 - 92,205,001 (+)	NCBI		GRCr8
mRatBN7.2	10	91,684,288 - 91,705,284 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	91,687,831 - 91,705,282 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	96,743,162 - 96,760,629 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	96,206,333 - 96,223,802 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	91,609,473 - 91,627,163 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	94,944,243 - 94,961,795 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	94,944,436 - 94,961,791 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	94,691,398 - 94,708,042 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	96,110,944 - 96,111,829 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	96,125,313 - 96,126,199 (+)	NCBI
Celera	10	90,354,342 - 90,371,815 (+)	NCBI		Celera
Cytogenetic Map	10	q32.1	NCBI

Milr1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955478	7,416,609 - 7,429,817 (-)	NCBI	ChiLan1.0	ChiLan1.0

MILR1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	80,638,041 - 80,662,660 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	85,455,613 - 85,483,995 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	58,546,046 - 58,570,679 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	63,638,549 - 63,663,492 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	63,638,549 - 63,663,193 (+)	Ensembl	panpan1.1		panPan2

Milr1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	14,221,703 - 14,234,560 (-)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936541	4,959,838 - 4,972,543 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MILR1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	14,612,183 - 14,636,811 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	14,612,177 - 14,637,946 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

MILR1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	56,799,089 - 56,827,030 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	16	56,809,159 - 56,826,567 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666077	27,406,990 - 27,436,329 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Milr1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624870	85,695 - 142,842 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in MILR1
140 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005624262	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038485182	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038485183	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038546857	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038546858	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038610831	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038676033	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038676034	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_537592	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000092	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000103	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000313	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000018628 ⟹ ENSCAFP00000017256

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	9	12,251,186 - 12,266,605 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845040861 ⟹ ENSCAFP00845031995

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	9	13,914,111 - 13,929,516 (+)	Ensembl

RefSeq Acc Id:

XM_005624262 ⟹ XP_005624319

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	9	12,251,085 - 12,266,608 (+)	NCBI
Dog10K_Boxer_Tasha	9	13,147,361 - 13,162,884 (+)	NCBI

Sequence:

show sequence

ATGACTCACCACCCTGGGGCCACCACGCCTCCTTTGCCCCCCTCTCTGATTTCTTCTGACAGAA
TATGGAGTCATTTGAATAAACTGTTCTTTTGGGGCTTCTTTTCTTCTCCCACATGTAAGGCTTA
TTTACCATTTTGAAGCTTGCATCTCCAAACCAACGTGATGTGGAAAAGGAGTTTTCTCGCGTTC
CTTTTCTCTCTTTCACTTCAAAAAGCTGCTCTGGATTGTGAGACAAGAGGAATAAACAACCCAG
TGATCACACCAGTGCTGAACGTTAATGTTGTTAAAATAGAAACAGACCGACATATAACACTACG
TTGTATCTCCTTCAATGGCTCTCTGCCCATCACTTATACTTTCTTTGAGAAAAATATTGCCATA
TCACCAGCTATTCCCAAGTATGTAAGGGAGCCTGCTGAATTCAACGTAACCAAGAACAGTGCTG
GAGAAATGGAGGAGTATAGGTGCAAAGCTAAAAACGAGTTGCCTGATCACACAAGATACAGTCA
GCCAATCCTCATCAATCCCCAAACAGGTGGATACAGCTGTCCTTTCTGCCTGCAGCTACTACTT
CCAGGGTTATTGCTGGTGGTAATCATAATAATCCCAATTCTGGGATTTTGGATACGACCAAAAT
ACAAAGCAAGAAAAGCTATGAGAGATAAGGCACCCAGAGACAATGGAAATACGGCCATGGAAGT
TGGAATATATGCAAATATCTGTGCAAATCAAGCAGGTCAGGAACCTGTGCCAGGCTTGGAACCA
CGGCAGTGTGTTCCCACAGCCCAAGAAGGAATCAGACACCCCCAGGAGATCCATTATGCTACTC
CCATGTTCCAGGAGGTGGCACCAAGAGTTCATGAAGCCTGTAACGACCATAAAACTGGCTATCT
TTATTCTGATCTCATCTTGTGAAATCTAAGTTGTGAAATAAGATACATCTCAGTGTTAGATCCT
TTTTATAAAGCTGATTTACATGAAGCAAATGTGATCAATACTTAAAAATACCTCACTGGTGACC
TAAAATGAATTACTATTTTTCATGATTAGCACTA

hide sequence

RefSeq Acc Id:

XM_038485182 ⟹ XP_038341110

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	9	12,860,146 - 12,875,655 (+)	NCBI

RefSeq Acc Id:

XM_038485183 ⟹ XP_038341111

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	9	12,860,140 - 12,875,655 (+)	NCBI

RefSeq Acc Id:

XM_038546857 ⟹ XP_038402785

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	9	14,658,477 - 14,674,021 (-)	NCBI

RefSeq Acc Id:

XM_038546858 ⟹ XP_038402786

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	9	14,658,477 - 14,674,027 (-)	NCBI

RefSeq Acc Id:

XM_038610831 ⟹ XP_038466759

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	9	14,657,301 - 14,672,826 (-)	NCBI

RefSeq Acc Id:

XM_038676033 ⟹ XP_038531961

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	9	13,914,016 - 13,929,519 (+)	NCBI

RefSeq Acc Id:

XM_038676034 ⟹ XP_038531962

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	9	13,914,010 - 13,929,519 (+)	NCBI

RefSeq Acc Id:

XM_537592 ⟹ XP_537592

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	9	12,251,088 - 12,266,608 (+)	NCBI
Dog10K_Boxer_Tasha	9	13,147,367 - 13,162,884 (+)	NCBI

Sequence:

show sequence

ACTCACCACCCTGGGGCCACCACGCCTCCTTTGCCCCCCTCTCTGATTTCTTCTGACAGAATAT
GGAGTCATTTGAATAAACTGTTCTTTTGGGGCTTCTTTTCTTCTCCCACATGTAAGGCTTATTT
ACCATTTTGAAGCTTGCATCTCCAAACCAACGTGATGTGGAAAAGGAGTTTTCTCGCGTTCCTT
TTCTCTCTTTCACTTCAAAAAGCTGCTCTGGATTGTGAGACAAGAGGAATAAACAAACTCCTTT
CTCCAAGTTTGGACTCAGAAACAAAAGCAGTCAGGAGAGGTCAAAATGTATCACTAATTTGTTC
CAATCAGAACAAATCACTAGAGATCACTTATTTTTTGTTTCGGAATGAGAAACACCTGAGAACC
CAGAATGGAAAAGGTGAACCCGTGATTTTTAACCTAAGCATCTCAGAAGCCCATGAGTTGGGCC
CCTACAAATGCAAAGCTCAAATTTCTAACTGTTCAATTAGCAAGTACAGTCGTGAGTTCAACTT
CATATTTGTTGACCCAGTGATCACACCAGTGCTGAACGTTAATGTTGTTAAAATAGAAACAGAC
CGACATATAACACTACGTTGTATCTCCTTCAATGGCTCTCTGCCCATCACTTATACTTTCTTTG
AGAAAAATATTGCCATATCACCAGCTATTCCCAAGTATGTAAGGGAGCCTGCTGAATTCAACGT
AACCAAGAACAGTGCTGGAGAAATGGAGGAGTATAGGTGCAAAGCTAAAAACGAGTTGCCTGAT
CACACAAGATACAGTCAGCCAATCCTCATCAATCCCCAAACAGGTGGATACAGCTGTCCTTTCT
GCCTGCAGCTACTACTTCCAGGGTTATTGCTGGTGGTAATCATAATAATCCCAATTCTGGGATT
TTGGATACGACCAAAATACAAAGCAAGAAAAGCTATGAGAGATAAGGCACCCAGAGACAATGGA
AATACGGCCATGGAAGTTGGAATATATGCAAATATCTGTGCAAATCAAGCAGGTCAGGAACCTG
TGCCAGGCTTGGAACCACGGCAGTGTGTTCCCACAGCCCAAGAAGGAATCAGACACCCCCAGGA
GATCCATTATGCTACTCCCATGTTCCAGGAGGTGGCACCAAGAGTTCATGAAGCCTGTAACGAC
CATAAAACTGGCTATCTTTATTCTGATCTCATCTTGTGAAATCTAAGTTGTGAAATAAGATACA
TCTCAGTGTTAGATCCTTTTTATAAAGCTGATTTACATGAAGCAAATGTGATCAATACTTAAAA
ATACCTCACTGGTGACCTAAAATGAATTACTATTTTTCATGATTAGCACTA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005624319	(Get FASTA)	NCBI Sequence Viewer
	XP_038341110	(Get FASTA)	NCBI Sequence Viewer
	XP_038341111	(Get FASTA)	NCBI Sequence Viewer
	XP_038402785	(Get FASTA)	NCBI Sequence Viewer
	XP_038402786	(Get FASTA)	NCBI Sequence Viewer
	XP_038466759	(Get FASTA)	NCBI Sequence Viewer
	XP_038531961	(Get FASTA)	NCBI Sequence Viewer
	XP_038531962	(Get FASTA)	NCBI Sequence Viewer
	XP_537592	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000017256.4
	ENSCAFP00030025668.1
	ENSCAFP00040030393.1
	ENSCAFP00845031995
	ENSCAFP00845031995.1

RefSeq Acc Id:	XP_537592 ⟸ XM_537592
- Peptide Label:	isoform X2
- UniProtKB:	A0A8P0SGQ4 (UniProtKB/TrEMBL), A0A8C0NF33 (UniProtKB/TrEMBL)
- Sequence:	show sequence MWKRSFLAFLFSLSLQKAALDCETRGINKLLSPSLDSETKAVRRGQNVSLICSNQNKSLEITYF LFRNEKHLRTQNGKGEPVIFNLSISEAHELGPYKCKAQISNCSISKYSREFNFIFVDPVITPVL NVNVVKIETDRHITLRCISFNGSLPITYTFFEKNIAISPAIPKYVREPAEFNVTKNSAGEMEEY RCKAKNELPDHTRYSQPILINPQTGGYSCPFCLQLLLPGLLLVVIIIIPILGFWIRPKYKARKA MRDKAPRDNGNTAMEVGIYANICANQAGQEPVPGLEPRQCVPTAQEGIRHPQEIHYATPMFQEV APRVHEACNDHKTGYLYSDLIL hide sequence

RefSeq Acc Id:

XP_005624319 ⟸ XM_005624262

- Peptide Label:

isoform X1

- Sequence:

show sequence

MWKRSFLAFLFSLSLQKAALDCETRGINNPVITPVLNVNVVKIETDRHITLRCISFNGSLPITY
TFFEKNIAISPAIPKYVREPAEFNVTKNSAGEMEEYRCKAKNELPDHTRYSQPILINPQTGGYS
CPFCLQLLLPGLLLVVIIIIPILGFWIRPKYKARKAMRDKAPRDNGNTAMEVGIYANICANQAG
QEPVPGLEPRQCVPTAQEGIRHPQEIHYATPMFQEVAPRVHEACNDHKTGYLYSDLIL

hide sequence

Ensembl Acc Id:

ENSCAFP00000017256 ⟸ ENSCAFT00000018628

RefSeq Acc Id:	XP_038341111 ⟸ XM_038485183
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038341110 ⟸ XM_038485182
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038466759 ⟸ XM_038610831
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038531962 ⟸ XM_038676034
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038531961 ⟸ XM_038676033
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0R8I9 (UniProtKB/TrEMBL), A0A8I3PDD3 (UniProtKB/TrEMBL), A0A8C0NF33 (UniProtKB/TrEMBL), A0A8C0T6Y8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038402786 ⟸ XM_038546858
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038402785 ⟸ XM_038546857
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0NF33 (UniProtKB/TrEMBL), A0A8C0T6Y8 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCAFP00845031995 ⟸ ENSCAFT00845040861

Protein Domains

Ig-like

Promoters

RGD ID:

13684464

Promoter ID:

EPDNEW_C2530

Type:

single initiation site

Name:

MILR1_1

Description:

mast cell immunoglobulin like receptor 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	9	12,251,140 - 12,251,200	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000011727	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030016010	UniProtKB/TrEMBL
	ENSCAFG00040018878	UniProtKB/TrEMBL
	ENSCAFG00845023160	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000018628.5	UniProtKB/TrEMBL
	ENSCAFT00030029452.1	UniProtKB/TrEMBL
	ENSCAFT00040034913.1	UniProtKB/TrEMBL
	ENSCAFT00845040861	ENTREZGENE
	ENSCAFT00845040861.1	UniProtKB/TrEMBL
Gene3D-CATH	2.60.40.10	UniProtKB/TrEMBL
InterPro	Ig-like_dom	UniProtKB/TrEMBL
	Ig-like_dom_sf	UniProtKB/TrEMBL
	Ig-like_fold	UniProtKB/TrEMBL
	Ig_C17orf99	UniProtKB/TrEMBL
NCBI Gene	MILR1	ENTREZGENE
Pfam	Ig_2	UniProtKB/TrEMBL
	Ig_C17orf99	UniProtKB/TrEMBL
PROSITE	IG_LIKE	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48726	UniProtKB/TrEMBL
UniProt	A0A8C0NF33	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0R8I9	ENTREZGENE
	A0A8C0T6Y8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3PDD3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0SGQ4	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:43235	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar