RHBDL3 (rhomboid like 3) - Rat Genome Database

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Gene: RHBDL3 (rhomboid like 3) Canis lupus familiaris
Analyze
Symbol: RHBDL3
Name: rhomboid like 3
RGD ID: 12429116
Description: ENCODES a protein that exhibits calcium ion binding (inferred); peptidase activity (inferred); serine-type endopeptidase activity (inferred); INVOLVED IN proteolysis (inferred); FOUND IN membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: rhomboid-related protein 3
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1940,629,989 - 40,676,369 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl940,633,277 - 40,675,234 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha939,788,915 - 39,835,852 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0941,446,671 - 41,493,639 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl941,446,696 - 41,493,627 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1940,232,275 - 40,279,204 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0940,526,390 - 40,573,535 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0940,601,234 - 40,648,166 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
proteolysis  (IEA)

Cellular Component
membrane  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
RHBDL3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1940,629,989 - 40,676,369 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl940,633,277 - 40,675,234 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha939,788,915 - 39,835,852 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0941,446,671 - 41,493,639 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl941,446,696 - 41,493,627 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1940,232,275 - 40,279,204 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0940,526,390 - 40,573,535 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0940,601,234 - 40,648,166 (-)NCBIUU_Cfam_GSD_1.0
RHBDL3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381732,265,832 - 32,324,661 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1732,265,832 - 32,324,659 (+)EnsemblGRCh38hg38GRCh38
GRCh371730,592,851 - 30,651,680 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361727,617,308 - 27,675,793 (+)NCBINCBI36Build 36hg18NCBI36
Celera1727,503,536 - 27,561,889 (+)NCBICelera
Cytogenetic Map17q11.2NCBI
HuRef1726,782,764 - 26,838,459 (+)NCBIHuRef
CHM1_11730,655,694 - 30,714,172 (+)NCBICHM1_1
T2T-CHM13v2.01733,211,602 - 33,270,432 (+)NCBIT2T-CHM13v2.0
Rhbdl3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391180,191,296 - 80,246,812 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1180,191,738 - 80,246,781 (+)EnsemblGRCm39 Ensembl
GRCm381180,300,471 - 80,355,986 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1180,300,912 - 80,355,955 (+)EnsemblGRCm38mm10GRCm38
MGSCv371180,114,414 - 80,169,488 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361180,117,271 - 80,172,150 (+)NCBIMGSCv36mm8
Celera1189,937,356 - 89,993,361 (+)NCBICelera
Cytogenetic Map11B5NCBI
cM Map1147.73NCBI
Rhbdl3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81065,797,145 - 65,851,949 (+)NCBIGRCr8
mRatBN7.21065,299,250 - 65,354,099 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1065,299,194 - 65,354,099 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1069,927,814 - 69,982,382 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01069,433,113 - 69,487,682 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01064,896,807 - 64,951,358 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01067,676,999 - 67,731,670 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1067,677,071 - 67,731,670 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01067,333,731 - 67,387,701 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41068,525,172 - 68,579,955 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11068,538,794 - 68,591,860 (+)NCBI
Celera1064,260,010 - 64,314,177 (+)NCBICelera
Cytogenetic Map10q26NCBI
Rhbdl3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554817,232,692 - 7,276,085 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554817,233,305 - 7,276,085 (+)NCBIChiLan1.0ChiLan1.0
RHBDL3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21932,132,495 - 32,191,464 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11734,012,321 - 34,071,337 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01724,451,483 - 24,510,736 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11724,739,326 - 24,797,155 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1724,739,326 - 24,797,159 (-)Ensemblpanpan1.1panPan2
Rhbdl3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560239,704,675 - 39,751,527 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365382,583,046 - 2,629,453 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365382,582,598 - 2,629,472 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RHBDL3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1242,627,456 - 42,676,900 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11242,623,648 - 42,676,312 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21244,387,594 - 44,417,991 (-)NCBISscrofa10.2Sscrofa10.2susScr3
RHBDL3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11625,835,300 - 25,894,497 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1625,835,428 - 25,894,871 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660754,151,058 - 4,211,199 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rhbdl3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624875343,478 - 392,374 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624875343,409 - 392,365 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in RHBDL3
629 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 1 4
Low 2 2 13 5 6 8 8 6 3
Below cutoff 3 2 9 6 1 6 6 4 3

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005624825 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014116757 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038486322 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038486323 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038486324 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038486325 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038548149 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038548150 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038548151 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038548153 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038610029 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038610030 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038610031 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038612115 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038612116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038612117 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038612118 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038677368 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038677369 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038677370 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038677371 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005330988 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005330989 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005364685 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005399126 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005432451 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005432452 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_293205 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000094 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000313 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000029252   ⟹   ENSCAFP00000027200
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl940,633,277 - 40,675,234 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845022615   ⟹   ENSCAFP00845017744
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl941,446,696 - 41,493,627 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845022650   ⟹   ENSCAFP00845017762
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl941,446,696 - 41,493,627 (-)Ensembl
RefSeq Acc Id: XM_005624825   ⟹   XP_005624882
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1940,629,989 - 40,676,360 (-)NCBI
Dog10K_Boxer_Tasha939,788,915 - 39,835,230 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038486322   ⟹   XP_038342250
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1940,232,275 - 40,278,582 (-)NCBI
RefSeq Acc Id: XM_038486323   ⟹   XP_038342251
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1940,232,275 - 40,279,204 (-)NCBI
RefSeq Acc Id: XM_038486324   ⟹   XP_038342252
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1940,232,275 - 40,279,192 (-)NCBI
RefSeq Acc Id: XM_038486325   ⟹   XP_038342253
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1940,232,275 - 40,276,820 (-)NCBI
RefSeq Acc Id: XM_038548149   ⟹   XP_038404077
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0940,601,234 - 40,647,536 (-)NCBI
RefSeq Acc Id: XM_038548150   ⟹   XP_038404078
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0940,601,234 - 40,648,166 (-)NCBI
RefSeq Acc Id: XM_038548151   ⟹   XP_038404079
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0940,601,234 - 40,648,154 (-)NCBI
RefSeq Acc Id: XM_038548153   ⟹   XP_038404081
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0940,601,234 - 40,645,789 (-)NCBI
RefSeq Acc Id: XM_038610029   ⟹   XP_038465957
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha939,788,915 - 39,835,852 (-)NCBI
RefSeq Acc Id: XM_038610030   ⟹   XP_038465958
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha939,788,915 - 39,835,840 (-)NCBI
RefSeq Acc Id: XM_038610031   ⟹   XP_038465959
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha939,788,915 - 39,833,468 (-)NCBI
RefSeq Acc Id: XM_038612115   ⟹   XP_038468043
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0940,526,390 - 40,572,904 (-)NCBI
RefSeq Acc Id: XM_038612116   ⟹   XP_038468044
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0940,526,390 - 40,573,535 (-)NCBI
RefSeq Acc Id: XM_038612117   ⟹   XP_038468045
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0940,526,390 - 40,573,523 (-)NCBI
RefSeq Acc Id: XM_038612118   ⟹   XP_038468046
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0940,526,390 - 40,571,148 (-)NCBI
RefSeq Acc Id: XM_038677368   ⟹   XP_038533296
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0941,446,671 - 41,493,035 (-)NCBI
RefSeq Acc Id: XM_038677369   ⟹   XP_038533297
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0941,446,671 - 41,493,639 (-)NCBI
RefSeq Acc Id: XM_038677370   ⟹   XP_038533298
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0941,446,671 - 41,493,627 (-)NCBI
RefSeq Acc Id: XM_038677371   ⟹   XP_038533299
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0941,446,671 - 41,491,272 (-)NCBI
RefSeq Acc Id: XR_005330988
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1940,235,846 - 40,278,587 (-)NCBI
RefSeq Acc Id: XR_005330989
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1940,238,253 - 40,278,587 (-)NCBI
RefSeq Acc Id: XR_005364685
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0940,604,805 - 40,647,540 (-)NCBI
RefSeq Acc Id: XR_005399126
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0940,529,986 - 40,572,908 (-)NCBI
RefSeq Acc Id: XR_005432451
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0941,450,271 - 41,493,040 (-)NCBI
RefSeq Acc Id: XR_005432452
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0941,452,672 - 41,493,040 (-)NCBI
RefSeq Acc Id: XR_293205
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1940,633,578 - 40,676,369 (-)NCBI
Dog10K_Boxer_Tasha939,792,486 - 39,835,235 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: XP_005624882   ⟸   XM_005624825
- Peptide Label: isoform X7
- UniProtKB: A0A8C0KVL1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000027200   ⟸   ENSCAFT00000029252
RefSeq Acc Id: XP_038342251   ⟸   XM_038486323
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038342252   ⟸   XM_038486324
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038342250   ⟸   XM_038486322
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038342253   ⟸   XM_038486325
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038468044   ⟸   XM_038612116
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038468045   ⟸   XM_038612117
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038468043   ⟸   XM_038612115
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038468046   ⟸   XM_038612118
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038533297   ⟸   XM_038677369
- Peptide Label: isoform X2
- UniProtKB: A0A8C0RKW2 (UniProtKB/TrEMBL),   A0A8C0KUZ3 (UniProtKB/TrEMBL),   A0A8I3RX60 (UniProtKB/TrEMBL),   A0A8C0KVL1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038533298   ⟸   XM_038677370
- Peptide Label: isoform X3
- UniProtKB: A0A8C0SG96 (UniProtKB/TrEMBL),   A0A8I3NNG0 (UniProtKB/TrEMBL),   A0A8C0KVL1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038533296   ⟸   XM_038677368
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KVL1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038533299   ⟸   XM_038677371
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038465957   ⟸   XM_038610029
- Peptide Label: isoform X2
- UniProtKB: A0A8C0RKW2 (UniProtKB/TrEMBL),   A0A8C0KUZ3 (UniProtKB/TrEMBL),   A0A8I3RX60 (UniProtKB/TrEMBL),   A0A8C0KVL1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038465958   ⟸   XM_038610030
- Peptide Label: isoform X3
- UniProtKB: A0A8C0SG96 (UniProtKB/TrEMBL),   A0A8I3NNG0 (UniProtKB/TrEMBL),   A0A8C0KVL1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038465959   ⟸   XM_038610031
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038404078   ⟸   XM_038548150
- Peptide Label: isoform X2
- UniProtKB: A0A8C0KUZ3 (UniProtKB/TrEMBL),   A0A8C0KVL1 (UniProtKB/TrEMBL),   A0A8C0RKW2 (UniProtKB/TrEMBL),   A0A8I3RX60 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038404079   ⟸   XM_038548151
- Peptide Label: isoform X3
- UniProtKB: A0A8C0KVL1 (UniProtKB/TrEMBL),   A0A8C0SG96 (UniProtKB/TrEMBL),   A0A8I3NNG0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038404077   ⟸   XM_038548149
- Peptide Label: isoform X6
- UniProtKB: A0A8C0KVL1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038404081   ⟸   XM_038548153
- Peptide Label: isoform X4
RefSeq Acc Id: ENSCAFP00845017744   ⟸   ENSCAFT00845022615
RefSeq Acc Id: ENSCAFP00845017762   ⟸   ENSCAFT00845022650
Protein Domains
EF-hand   Peptidase S54 rhomboid


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000018418 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030015243 UniProtKB/TrEMBL
  ENSCAFG00040012767 UniProtKB/TrEMBL
  ENSCAFG00845012661 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000029252.5 UniProtKB/TrEMBL
  ENSCAFT00030028438.1 UniProtKB/TrEMBL
  ENSCAFT00030028493.1 UniProtKB/TrEMBL
  ENSCAFT00040023767.1 UniProtKB/TrEMBL
  ENSCAFT00040023791.1 UniProtKB/TrEMBL
  ENSCAFT00845022615 ENTREZGENE
  ENSCAFT00845022615.1 UniProtKB/TrEMBL
  ENSCAFT00845022650 ENTREZGENE
  ENSCAFT00845022650.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.1540.10 UniProtKB/TrEMBL
  EF-hand UniProtKB/TrEMBL
InterPro EF-hand-dom_pair UniProtKB/TrEMBL
  EF_hand_dom UniProtKB/TrEMBL
  Peptidase_S54_rhomboid_dom UniProtKB/TrEMBL
  Peptidase_S54_rhomboid_met UniProtKB/TrEMBL
  Rhomboid-like_sf UniProtKB/TrEMBL
NCBI Gene RHBDL3 ENTREZGENE
PANTHER RHOMBOID-RELATED PROTEIN UniProtKB/TrEMBL
  RHOMBOID-RELATED PROTEIN 3 UniProtKB/TrEMBL
Pfam EF-hand_7 UniProtKB/TrEMBL
  Rhomboid UniProtKB/TrEMBL
PIRSF Rhomboid UniProtKB/TrEMBL
PROSITE EF_HAND_2 UniProtKB/TrEMBL
Superfamily-SCOP SSF144091 UniProtKB/TrEMBL
  SSF47473 UniProtKB/TrEMBL
UniProt A0A8C0KUZ3 ENTREZGENE
  A0A8C0KVL1 ENTREZGENE
  A0A8C0RKW2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0SG96 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3NNG0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3RX60 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:49700 ENTREZGENE