TMC6 (transmembrane channel like 6) - Rat Genome Database

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Gene: TMC6 (transmembrane channel like 6) Canis lupus familiaris
Analyze
Symbol: TMC6
Name: transmembrane channel like 6
RGD ID: 12423295
Description: INVOLVED IN intracellular zinc ion homeostasis (inferred); protein stabilization (inferred); ASSOCIATED WITH epidermodysplasia verruciformis (ortholog); Epidermodysplasia Verruciformis 1 (ortholog); Epidermodysplasia Verruciformis 2 (ortholog); FOUND IN cytoplasm (inferred); endoplasmic reticulum (inferred); Golgi apparatus (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: transmembrane channel-like protein 6
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.193,002,689 - 3,018,059 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl92,805,651 - 3,016,309 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha93,682,788 - 3,700,802 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.093,677,324 - 3,695,401 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl93,679,308 - 3,692,573 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.193,700,384 - 3,718,362 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.093,824,645 - 3,842,709 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.093,906,112 - 3,924,188 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
TMC6
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.193,002,689 - 3,018,059 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl92,805,651 - 3,016,309 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha93,682,788 - 3,700,802 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.093,677,324 - 3,695,401 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl93,679,308 - 3,692,573 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.193,700,384 - 3,718,362 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.093,824,645 - 3,842,709 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.093,906,112 - 3,924,188 (+)NCBIUU_Cfam_GSD_1.0
TMC6
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381778,107,397 - 78,132,427 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1778,107,397 - 78,132,407 (-)EnsemblGRCh38hg38GRCh38
GRCh371776,103,478 - 76,128,508 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361773,620,594 - 73,640,083 (-)NCBINCBI36Build 36hg18NCBI36
Build 341773,620,593 - 73,640,083NCBI
Celera1772,704,979 - 72,724,886 (-)NCBICelera
Cytogenetic Map17q25.3NCBI
HuRef1771,533,000 - 71,552,763 (-)NCBIHuRef
CHM1_11776,173,673 - 76,193,041 (-)NCBICHM1_1
T2T-CHM13v2.01778,998,786 - 79,026,206 (-)NCBIT2T-CHM13v2.0
Tmc6
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911117,656,811 - 117,673,019 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl11117,656,814 - 117,673,024 (-)EnsemblGRCm39 Ensembl
GRCm3811117,765,985 - 117,782,193 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11117,765,988 - 117,782,198 (-)EnsemblGRCm38mm10GRCm38
MGSCv3711117,627,299 - 117,641,997 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3611117,582,078 - 117,596,711 (-)NCBIMGSCv36mm8
Celera11129,509,789 - 129,524,625 (-)NCBICelera
Cytogenetic Map11E2NCBI
cM Map1182.96NCBI
Tmc6
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr810103,480,762 - 103,498,207 (-)NCBIGRCr8
mRatBN7.210102,982,059 - 102,999,509 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl10102,971,229 - 102,998,960 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx10108,082,663 - 108,099,843 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.010107,545,762 - 107,562,944 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.010102,902,850 - 102,919,491 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.010106,766,857 - 106,783,004 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl10106,767,161 - 106,781,950 (-)NCBIRnor6.0rn6Rnor6.0
Rnor_5.010106,405,613 - 106,420,792 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera10101,542,906 - 101,560,725 (-)NCBICelera
Cytogenetic Map10q32.2NCBI
Tmc6
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555064,424,023 - 4,435,400 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555064,422,658 - 4,435,671 (+)NCBIChiLan1.0ChiLan1.0
TMC6
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21994,157,410 - 94,179,049 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11798,992,210 - 99,007,736 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01772,183,937 - 72,205,550 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11777,737,078 - 77,757,964 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1777,742,467 - 77,757,482 (-)Ensemblpanpan1.1panPan2
Tmc6
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244056023,652,272 - 3,666,870 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365942,744,722 - 2,758,907 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365942,743,466 - 2,759,482 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TMC6
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl123,825,443 - 3,844,624 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1123,825,374 - 3,848,367 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
TMC6
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11643,585,975 - 43,605,452 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1643,589,522 - 43,605,220 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607714,307,091 - 14,323,590 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tmc6
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248017,644,146 - 7,654,310 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248017,643,139 - 7,655,895 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in TMC6
294 total Variants

Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 14 10

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_022423895 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038484815 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038484816 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038484817 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038484818 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038484819 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038546484 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038546485 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038546486 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038546487 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038546488 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038610484 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038610485 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038610486 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038610487 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038610488 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038624619 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038624624 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038624629 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038624632 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038624633 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038675605 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038675606 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038675607 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038675608 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038675609 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005330404 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005330405 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005364155 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005364156 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005398586 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005398587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005406001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005406002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005431880 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005431881 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000313 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCAFT00000008492   ⟹   ENSCAFP00000007873
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl92,805,651 - 3,016,309 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000076932   ⟹   ENSCAFP00000044925
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl92,805,651 - 3,016,309 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000092827   ⟹   ENSCAFP00000043437
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl93,006,042 - 3,016,309 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845027018   ⟹   ENSCAFP00845021260
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl93,679,308 - 3,692,571 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845027080   ⟹   ENSCAFP00845021310
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl93,679,308 - 3,692,571 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845027143   ⟹   ENSCAFP00845021359
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl93,679,308 - 3,692,571 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845027157   ⟹   ENSCAFP00845021368
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl93,679,308 - 3,692,571 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845027229   ⟹   ENSCAFP00845021421
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl93,679,309 - 3,692,573 (+)Ensembl
RefSeq Acc Id: XM_038484815   ⟹   XP_038340743
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.193,702,323 - 3,715,534 (+)NCBI
RefSeq Acc Id: XM_038484816   ⟹   XP_038340744
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.193,700,384 - 3,715,534 (+)NCBI
RefSeq Acc Id: XM_038484817   ⟹   XP_038340745
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.193,703,233 - 3,715,534 (+)NCBI
RefSeq Acc Id: XM_038484818   ⟹   XP_038340746
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.193,702,730 - 3,715,534 (+)NCBI
RefSeq Acc Id: XM_038484819   ⟹   XP_038340747
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.193,702,323 - 3,718,362 (+)NCBI
RefSeq Acc Id: XM_038546484   ⟹   XP_038402412
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.093,908,053 - 3,921,360 (+)NCBI
RefSeq Acc Id: XM_038546485   ⟹   XP_038402413
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.093,906,112 - 3,921,360 (+)NCBI
RefSeq Acc Id: XM_038546486   ⟹   XP_038402414
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.093,908,996 - 3,921,360 (+)NCBI
RefSeq Acc Id: XM_038546487   ⟹   XP_038402415
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.093,908,491 - 3,921,360 (+)NCBI
RefSeq Acc Id: XM_038546488   ⟹   XP_038402416
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.093,908,053 - 3,924,188 (+)NCBI
RefSeq Acc Id: XM_038610484   ⟹   XP_038466412
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.093,826,585 - 3,839,881 (+)NCBI
RefSeq Acc Id: XM_038610485   ⟹   XP_038466413
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.093,824,645 - 3,839,881 (+)NCBI
RefSeq Acc Id: XM_038610486   ⟹   XP_038466414
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.093,827,528 - 3,839,881 (+)NCBI
RefSeq Acc Id: XM_038610487   ⟹   XP_038466415
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.093,827,023 - 3,839,881 (+)NCBI
RefSeq Acc Id: XM_038610488   ⟹   XP_038466416
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.093,826,585 - 3,842,709 (+)NCBI
RefSeq Acc Id: XM_038624619   ⟹   XP_038480547
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha93,684,729 - 3,697,956 (+)NCBI
RefSeq Acc Id: XM_038624624   ⟹   XP_038480552
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha93,682,788 - 3,697,956 (+)NCBI
RefSeq Acc Id: XM_038624629   ⟹   XP_038480557
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha93,685,652 - 3,697,956 (+)NCBI
RefSeq Acc Id: XM_038624632   ⟹   XP_038480560
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha93,685,134 - 3,697,956 (+)NCBI
RefSeq Acc Id: XM_038624633   ⟹   XP_038480561
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha93,684,729 - 3,700,802 (+)NCBI
RefSeq Acc Id: XM_038675605   ⟹   XP_038531533
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.093,679,265 - 3,692,573 (+)NCBI
RefSeq Acc Id: XM_038675606   ⟹   XP_038531534
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.093,677,324 - 3,692,573 (+)NCBI
RefSeq Acc Id: XM_038675607   ⟹   XP_038531535
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.093,680,208 - 3,692,573 (+)NCBI
RefSeq Acc Id: XM_038675608   ⟹   XP_038531536
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.093,679,703 - 3,692,573 (+)NCBI
RefSeq Acc Id: XM_038675609   ⟹   XP_038531537
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.093,679,265 - 3,695,401 (+)NCBI
RefSeq Acc Id: XR_005330404
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.193,702,323 - 3,718,362 (+)NCBI
RefSeq Acc Id: XR_005330405
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.193,702,323 - 3,718,362 (+)NCBI
RefSeq Acc Id: XR_005364155
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.093,908,053 - 3,924,188 (+)NCBI
RefSeq Acc Id: XR_005364156
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.093,908,053 - 3,924,188 (+)NCBI
RefSeq Acc Id: XR_005398586
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.093,826,585 - 3,842,709 (+)NCBI
RefSeq Acc Id: XR_005398587
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.093,826,585 - 3,842,709 (+)NCBI
RefSeq Acc Id: XR_005406001
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha93,684,729 - 3,700,802 (+)NCBI
RefSeq Acc Id: XR_005406002
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha93,684,729 - 3,700,802 (+)NCBI
RefSeq Acc Id: XR_005431880
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.093,679,265 - 3,695,401 (+)NCBI
RefSeq Acc Id: XR_005431881
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.093,679,265 - 3,695,401 (+)NCBI
Protein Sequences
Protein RefSeqs XP_038340743 (Get FASTA)   NCBI Sequence Viewer  
  XP_038340744 (Get FASTA)   NCBI Sequence Viewer  
  XP_038340745 (Get FASTA)   NCBI Sequence Viewer  
  XP_038340746 (Get FASTA)   NCBI Sequence Viewer  
  XP_038340747 (Get FASTA)   NCBI Sequence Viewer  
  XP_038402412 (Get FASTA)   NCBI Sequence Viewer  
  XP_038402413 (Get FASTA)   NCBI Sequence Viewer  
  XP_038402414 (Get FASTA)   NCBI Sequence Viewer  
  XP_038402415 (Get FASTA)   NCBI Sequence Viewer  
  XP_038402416 (Get FASTA)   NCBI Sequence Viewer  
  XP_038466412 (Get FASTA)   NCBI Sequence Viewer  
  XP_038466413 (Get FASTA)   NCBI Sequence Viewer  
  XP_038466414 (Get FASTA)   NCBI Sequence Viewer  
  XP_038466415 (Get FASTA)   NCBI Sequence Viewer  
  XP_038466416 (Get FASTA)   NCBI Sequence Viewer  
  XP_038480547 (Get FASTA)   NCBI Sequence Viewer  
  XP_038480552 (Get FASTA)   NCBI Sequence Viewer  
  XP_038480557 (Get FASTA)   NCBI Sequence Viewer  
  XP_038480560 (Get FASTA)   NCBI Sequence Viewer  
  XP_038480561 (Get FASTA)   NCBI Sequence Viewer  
  XP_038531533 (Get FASTA)   NCBI Sequence Viewer  
  XP_038531534 (Get FASTA)   NCBI Sequence Viewer  
  XP_038531535 (Get FASTA)   NCBI Sequence Viewer  
  XP_038531536 (Get FASTA)   NCBI Sequence Viewer  
  XP_038531537 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000007873.4
  ENSCAFP00000044925.2
  ENSCAFP00030004264.1
  ENSCAFP00040006588.1
  ENSCAFP00040006627.1
  ENSCAFP00040006655.1
  ENSCAFP00040006689.1
  ENSCAFP00040006719.1
  ENSCAFP00040006759.1
  ENSCAFP00845021260.1
  ENSCAFP00845021310.1
  ENSCAFP00845021359
  ENSCAFP00845021359.1
  ENSCAFP00845021368.1
  ENSCAFP00845021421.1
Ensembl Acc Id: ENSCAFP00000043437   ⟸   ENSCAFT00000092827
Ensembl Acc Id: ENSCAFP00000044925   ⟸   ENSCAFT00000076932
Ensembl Acc Id: ENSCAFP00000007873   ⟸   ENSCAFT00000008492
RefSeq Acc Id: XP_038340744   ⟸   XM_038484816
RefSeq Acc Id: XP_038340747   ⟸   XM_038484819
RefSeq Acc Id: XP_038340743   ⟸   XM_038484815
RefSeq Acc Id: XP_038340746   ⟸   XM_038484818
RefSeq Acc Id: XP_038340745   ⟸   XM_038484817
RefSeq Acc Id: XP_038466413   ⟸   XM_038610485
RefSeq Acc Id: XP_038466416   ⟸   XM_038610488
RefSeq Acc Id: XP_038466412   ⟸   XM_038610484
RefSeq Acc Id: XP_038466415   ⟸   XM_038610487
RefSeq Acc Id: XP_038466414   ⟸   XM_038610486
RefSeq Acc Id: XP_038531534   ⟸   XM_038675606
- UniProtKB: A0A8I3P4M9 (UniProtKB/TrEMBL),   A0A8C0Q591 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038531537   ⟸   XM_038675609
- UniProtKB: A0A8I3P4M9 (UniProtKB/TrEMBL),   A0A8C0Q591 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038531533   ⟸   XM_038675605
- UniProtKB: A0A8I3P4M9 (UniProtKB/TrEMBL),   A0A8C0Q591 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038531536   ⟸   XM_038675608
- UniProtKB: A0A8I3P4M9 (UniProtKB/TrEMBL),   A0A8C0Q591 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038531535   ⟸   XM_038675607
- UniProtKB: A0A8I3P4M9 (UniProtKB/TrEMBL),   A0A8C0Q591 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038480552   ⟸   XM_038624624
- UniProtKB: A0A8P0SAS1 (UniProtKB/TrEMBL),   A0A8C0Q591 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038480561   ⟸   XM_038624633
- UniProtKB: A0A8P0SAS1 (UniProtKB/TrEMBL),   A0A8C0Q591 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038480547   ⟸   XM_038624619
- UniProtKB: A0A8P0SAS1 (UniProtKB/TrEMBL),   A0A8C0Q591 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038480560   ⟸   XM_038624632
- UniProtKB: A0A8P0SAS1 (UniProtKB/TrEMBL),   A0A8C0Q591 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038480557   ⟸   XM_038624629
- UniProtKB: A0A8P0SAS1 (UniProtKB/TrEMBL),   A0A8C0Q591 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038402413   ⟸   XM_038546485
- UniProtKB: A0A8C0Q591 (UniProtKB/TrEMBL),   A0A8I3P4M9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038402416   ⟸   XM_038546488
- UniProtKB: A0A8C0Q591 (UniProtKB/TrEMBL),   A0A8I3P4M9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038402412   ⟸   XM_038546484
- UniProtKB: A0A8C0Q591 (UniProtKB/TrEMBL),   A0A8I3P4M9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038402415   ⟸   XM_038546487
- UniProtKB: A0A8C0Q591 (UniProtKB/TrEMBL),   A0A8I3P4M9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038402414   ⟸   XM_038546486
- UniProtKB: A0A8C0Q591 (UniProtKB/TrEMBL),   A0A8I3P4M9 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCAFP00845021421   ⟸   ENSCAFT00845027229
Ensembl Acc Id: ENSCAFP00845021310   ⟸   ENSCAFT00845027080
Ensembl Acc Id: ENSCAFP00845021359   ⟸   ENSCAFT00845027143
Ensembl Acc Id: ENSCAFP00845021368   ⟸   ENSCAFT00845027157
Ensembl Acc Id: ENSCAFP00845021260   ⟸   ENSCAFT00845027018
Protein Domains
TMC


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000005252 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030002596 UniProtKB/TrEMBL
  ENSCAFG00040003954 UniProtKB/TrEMBL
  ENSCAFG00845015089 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000008492.4 UniProtKB/TrEMBL
  ENSCAFT00000076932.2 UniProtKB/TrEMBL
  ENSCAFT00030004794.1 UniProtKB/TrEMBL
  ENSCAFT00040007558.1 UniProtKB/TrEMBL
  ENSCAFT00040007598.1 UniProtKB/TrEMBL
  ENSCAFT00040007626.1 UniProtKB/TrEMBL
  ENSCAFT00040007662.1 UniProtKB/TrEMBL
  ENSCAFT00040007694.1 UniProtKB/TrEMBL
  ENSCAFT00040007735.1 UniProtKB/TrEMBL
  ENSCAFT00845027018.1 UniProtKB/TrEMBL
  ENSCAFT00845027080.1 UniProtKB/TrEMBL
  ENSCAFT00845027143 ENTREZGENE
  ENSCAFT00845027143.1 UniProtKB/TrEMBL
  ENSCAFT00845027157.1 UniProtKB/TrEMBL
  ENSCAFT00845027229 ENTREZGENE
  ENSCAFT00845027229.1 UniProtKB/TrEMBL
InterPro TMC UniProtKB/TrEMBL
  TMC_dom UniProtKB/TrEMBL
NCBI Gene TMC6 ENTREZGENE
PANTHER PTHR23302 UniProtKB/TrEMBL
  TRANSMEMBRANE CHANNEL-LIKE PROTEIN 6 UniProtKB/TrEMBL
Pfam TMC UniProtKB/TrEMBL
UniProt A0A8C0M015_CANLF UniProtKB/TrEMBL
  A0A8C0Q0I3_CANLF UniProtKB/TrEMBL
  A0A8C0Q591 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0Q5E7_CANLF UniProtKB/TrEMBL
  A0A8C0Q6P9_CANLF UniProtKB/TrEMBL
  A0A8C0RXM5_CANLF UniProtKB/TrEMBL
  A0A8I3NWU7_CANLF UniProtKB/TrEMBL
  A0A8I3NZI2_CANLF UniProtKB/TrEMBL
  A0A8I3NZK2_CANLF UniProtKB/TrEMBL
  A0A8I3P4M9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3S1D2_CANLF UniProtKB/TrEMBL
  A0A8P0SAS1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0SY20_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:47425 ENTREZGENE