LOC100684996 (ATP synthase subunit d, mitochondrial) - Rat Genome Database

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Gene: LOC100684996 (ATP synthase subunit d, mitochondrial) Canis lupus familiaris
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Symbol: LOC100684996
Name: ATP synthase subunit d, mitochondrial
RGD ID: 12413920
Description: ENCODES a protein that exhibits proton transmembrane transporter activity (inferred); INVOLVED IN proton motive force-driven ATP synthesis (inferred); proton transmembrane transport (inferred); FOUND IN mitochondrial inner membrane (inferred); mitochondrion (inferred); proton-transporting ATP synthase complex, coupling factor F(o) (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: ATP synthase subunit d, mitochondrial pseudogene; ATP synthase subunit d, mitochondrial-like
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1351,897,600 - 1,898,203 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha351,909,684 - 1,910,277 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0351,856,209 - 1,856,802 (-)NCBIROS_Cfam_1.0
UNSW_CanFamBas_1.0351,852,318 - 1,852,911 (-)NCBIUNSW_CanFamBas_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

Genomics

Variants

.
Variants in LOC100684996
6 total Variants

Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 14 10

Sequence


RefSeq Acc Id: XM_038446172   ⟹   XP_038302100
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0351,856,209 - 1,856,802 (-)NCBI
RefSeq Acc Id: XM_038463171   ⟹   XP_038319099
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha351,909,684 - 1,910,277 (-)NCBI
RefSeq Acc Id: XM_038648374   ⟹   XP_038504302
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0351,852,318 - 1,852,911 (-)NCBI
Protein Sequences
Protein RefSeqs XP_038302100 (Get FASTA)   NCBI Sequence Viewer  
  XP_038319099 (Get FASTA)   NCBI Sequence Viewer  
  XP_038504302 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00030012365.1
  ENSCAFP00040022705.1
  ENSCAFP00040028585.1
RefSeq Acc Id: XP_038504302   ⟸   XM_038648374
RefSeq Acc Id: XP_038302100   ⟸   XM_038446172
- UniProtKB: A0A8C0QSY1 (UniProtKB/TrEMBL),   A0A8C0SZV6 (UniProtKB/TrEMBL),   A0A8C0SL81 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038319099   ⟸   XM_038463171
- UniProtKB: A0A8C0QSY1 (UniProtKB/TrEMBL),   A0A8C0SZV6 (UniProtKB/TrEMBL),   A0A8C0SL81 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00030007730 UniProtKB/TrEMBL
  ENSCAFG00040014148 UniProtKB/TrEMBL
  ENSCAFG00040017800 UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00030014176.1 UniProtKB/TrEMBL
  ENSCAFT00040026108.1 UniProtKB/TrEMBL
  ENSCAFT00040032859.1 UniProtKB/TrEMBL
Gene3D-CATH 6.10.280.70 UniProtKB/TrEMBL
InterPro ATP_synth_F0_dsu_mt UniProtKB/TrEMBL
  ATP_synth_F0_dsu_sf_mt UniProtKB/TrEMBL
NCBI Gene LOC100684996 ENTREZGENE
PANTHER ATP SYNTHASE SUBUNIT D, MITOCHONDRIAL UniProtKB/TrEMBL
  PTHR12700 UniProtKB/TrEMBL
Pfam Mt_ATP-synt_D UniProtKB/TrEMBL
PIRSF ATPase_F0_D_mt UniProtKB/TrEMBL
Superfamily-SCOP SSF161065 UniProtKB/TrEMBL
UniProt A0A8C0QSY1 ENTREZGENE
  A0A8C0SL81 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0SZV6 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-01-12 LOC100684996  ATP synthase subunit d, mitochondrial  LOC100684996  ATP synthase subunit d, mitochondrial pseudogene  Symbol and/or name change 5135510 APPROVED
2017-09-12 LOC100684996  ATP synthase subunit d, mitochondrial pseudogene    ATP synthase subunit d, mitochondrial-like  Symbol and/or name change 5135510 APPROVED