GALNT14 (polypeptide N-acetylgalactosaminyltransferase 14) - Rat Genome Database

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Gene: GALNT14 (polypeptide N-acetylgalactosaminyltransferase 14) Canis lupus familiaris
Analyze
Symbol: GALNT14
Name: polypeptide N-acetylgalactosaminyltransferase 14
RGD ID: 12373738
Description: ENCODES a protein that exhibits carbohydrate binding (inferred); glycosyltransferase activity (inferred); metal ion binding (inferred); INVOLVED IN protein glycosylation (inferred); ASSOCIATED WITH Hydrops Fetalis (ortholog); intestinal volvulus (ortholog); Volvulus Of Midgut (ortholog); FOUND IN Golgi apparatus (inferred); Golgi membrane (inferred); membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11724,535,870 - 24,740,998 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1724,535,897 - 24,740,889 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1724,329,854 - 24,534,955 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01725,098,972 - 25,304,400 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1725,071,013 - 25,304,363 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11724,402,602 - 24,607,670 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01724,464,404 - 24,669,696 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01724,564,278 - 24,769,724 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GALNT14DogHydrops Fetalis  ISOGALNT14 (Homo sapiens)8554872ClinVar Annotator: match by term: Non-immune hydrops fetalisClinVarPMID:25741868 and PMID:26036949
GALNT14Dogintestinal volvulus  ISOGALNT14 (Homo sapiens)8554872ClinVar Annotator: match by term: INTESTINAL MALROTATION and FAMILIALClinVarPMID:25741868
GALNT14DogVolvulus Of Midgut  ISOGALNT14 (Homo sapiens)8554872ClinVar Annotator: match by term: Volvulus of midgutClinVarPMID:25741868


Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GALNT14Dogprotein glycosylation involved_inIEAUniPathway:UPA00378150520179 UniProtGO_REF:0000041
GALNT14Dogprotein O-linked glycosylation involved_inIBAFB:FBgn0027558 more ...150520179 GO_CentralGO_REF:0000033

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GALNT14DogGolgi apparatus located_inIEAUniProtKB-KW:KW-0333150520179 UniProtGO_REF:0000043
GALNT14DogGolgi apparatus is_active_inIBAFB:FBgn0027558 more ...150520179 GO_CentralGO_REF:0000033
GALNT14DogGolgi membrane located_inIEAUniProtKB-SubCell:SL-0134150520179 UniProtGO_REF:0000044
GALNT14Dogmembrane located_inIEAUniProtKB-KW:KW-0472150520179 UniProtGO_REF:0000043

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GALNT14Dogcarbohydrate binding enablesIEAUniProtKB-KW:KW-0430150520179 UniProtGO_REF:0000043
GALNT14Dogglycosyltransferase activity enablesIEAUniProtKB-KW:KW-0328150520179 UniProtGO_REF:0000043
GALNT14Dogmetal ion binding enablesIEAUniProtKB-KW:KW-0479150520179 UniProtGO_REF:0000043
GALNT14Dogpolypeptide N-acetylgalactosaminyltransferase activity enablesIBAFB:FBgn0001970 more ...150520179 GO_CentralGO_REF:0000033
GALNT14Dogtransferase activity enablesIEAUniProtKB-KW:KW-0808150520179 UniProtGO_REF:0000043

PMID:30032202  



GALNT14
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11724,535,870 - 24,740,998 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1724,535,897 - 24,740,889 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1724,329,854 - 24,534,955 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01725,098,972 - 25,304,400 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1725,071,013 - 25,304,363 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11724,402,602 - 24,607,670 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01724,464,404 - 24,669,696 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01724,564,278 - 24,769,724 (-)NCBIUU_Cfam_GSD_1.0
GALNT14
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38230,886,782 - 31,138,440 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl230,910,467 - 31,155,202 (-)EnsemblGRCh38hg38GRCh38
GRCh37231,133,333 - 31,361,306 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36230,986,837 - 31,215,075 (-)NCBINCBI36Build 36hg18NCBI36
Build 34231,044,984 - 31,273,222NCBI
Celera230,976,434 - 31,204,286 (-)NCBICelera
Cytogenetic Map2p23.1NCBI
HuRef230,871,025 - 31,099,253 (-)NCBIHuRef
CHM1_1231,063,648 - 31,291,908 (-)NCBICHM1_1
T2T-CHM13v2.0230,930,318 - 31,182,606 (-)NCBIT2T-CHM13v2.0
Galnt14
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391773,800,202 - 74,019,138 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1773,800,223 - 74,017,448 (-)EnsemblGRCm39 Ensembl
GRCm381773,493,207 - 73,712,138 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1773,493,228 - 73,710,453 (-)EnsemblGRCm38mm10GRCm38
MGSCv371773,843,091 - 74,059,791 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361773,398,110 - 73,614,946 (-)NCBIMGSCv36mm8
Celera1777,778,062 - 78,001,536 (-)NCBICelera
Cytogenetic Map17E2NCBI
cM Map1744.88NCBI
Galnt14
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8627,507,878 - 27,724,033 (+)NCBIGRCr8
mRatBN7.2621,756,039 - 21,977,533 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl621,755,195 - 21,972,192 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx622,087,346 - 22,310,134 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0622,403,195 - 22,625,995 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0621,883,616 - 22,106,284 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0624,770,308 - 24,985,711 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl624,770,317 - 24,985,716 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0634,618,708 - 34,832,960 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4621,776,366 - 22,007,575 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1621,779,318 - 22,010,527 (+)NCBI
Celera621,305,393 - 21,520,869 (+)NCBICelera
Cytogenetic Map6q14NCBI
Galnt14
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546912,649,071 - 12,866,010 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495546912,650,191 - 12,865,779 (-)NCBIChiLan1.0ChiLan1.0
GALNT14
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21295,360,637 - 95,588,036 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A95,364,611 - 95,592,728 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A30,923,029 - 31,150,626 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A30,994,746 - 31,222,421 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A30,995,180 - 31,221,784 (-)Ensemblpanpan1.1panPan2
Galnt14
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629268,654,444 - 68,855,470 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364931,984,238 - 2,184,271 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364931,984,054 - 2,184,693 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GALNT14
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl3108,223,996 - 108,440,189 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.13108,223,315 - 108,439,602 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.23114,948,537 - 115,164,544 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GALNT14
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11476,370,265 - 76,611,520 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1476,526,500 - 76,611,084 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604535,471,312 - 35,706,806 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Galnt14
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473812,730,406 - 12,942,866 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473812,731,793 - 12,942,855 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in GALNT14
3049 total Variants



adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 14 10


1 to 17 of 17 rows
RefSeq Transcripts XM_022404616 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038453426 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038453427 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038498628 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038498629 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038561198 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038561199 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038625246 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038625247 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038691173 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038691174 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_540140 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000198 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000359 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 17 of 17 rows

Ensembl Acc Id: ENSCAFT00000008578   ⟹   ENSCAFP00000007948
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1724,535,897 - 24,684,111 (-)Ensembl
Ensembl Acc Id: ENSCAFT00000049166   ⟹   ENSCAFP00000036314
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1724,535,897 - 24,740,889 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845021305   ⟹   ENSCAFP00845016756
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1725,071,013 - 25,304,363 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845021367   ⟹   ENSCAFP00845016800
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1725,099,001 - 25,304,363 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845021427   ⟹   ENSCAFP00845016840
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1725,099,001 - 25,176,377 (-)Ensembl
RefSeq Acc Id: XM_038453426   ⟹   XP_038309354
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1724,329,854 - 24,534,944 (-)NCBI
RefSeq Acc Id: XM_038453427   ⟹   XP_038309355
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1724,330,394 - 24,534,955 (-)NCBI
RefSeq Acc Id: XM_038498628   ⟹   XP_038354556
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11724,402,602 - 24,607,659 (-)NCBI
RefSeq Acc Id: XM_038498629   ⟹   XP_038354557
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11724,403,142 - 24,607,670 (-)NCBI
RefSeq Acc Id: XM_038561198   ⟹   XP_038417126
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01724,564,278 - 24,769,713 (-)NCBI
RefSeq Acc Id: XM_038561199   ⟹   XP_038417127
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01724,564,818 - 24,769,724 (-)NCBI
RefSeq Acc Id: XM_038625246   ⟹   XP_038481174
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01724,464,404 - 24,669,685 (-)NCBI
RefSeq Acc Id: XM_038625247   ⟹   XP_038481175
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01724,464,944 - 24,669,696 (-)NCBI
RefSeq Acc Id: XM_038691173   ⟹   XP_038547101
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01725,098,972 - 25,304,389 (-)NCBI
RefSeq Acc Id: XM_038691174   ⟹   XP_038547102
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01725,099,512 - 25,304,400 (-)NCBI
1 to 5 of 15 rows
1 to 5 of 15 rows
Ensembl Acc Id: ENSCAFP00000036314   ⟸   ENSCAFT00000049166
Ensembl Acc Id: ENSCAFP00000007948   ⟸   ENSCAFT00000008578
RefSeq Acc Id: XP_038354556   ⟸   XM_038498628
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038354557   ⟸   XM_038498629
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038481174   ⟸   XM_038625246
- Peptide Label: isoform X1
Ricin B lectin

RGD ID:13686213
Promoter ID:EPDNEW_C4282
Type:single initiation site
Name:GALNT14_1
Description:polypeptide N-acetylgalactosaminyltransferase 14
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11724,741,194 - 24,741,254EPDNEW


1 to 39 of 39 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSCAFG00000005328 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030015680 UniProtKB/TrEMBL
  ENSCAFG00040011178 UniProtKB/TrEMBL
  ENSCAFG00845011969 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000008578.5 UniProtKB/TrEMBL
  ENSCAFT00000049166.4 UniProtKB/TrEMBL
  ENSCAFT00000105424.1 UniProtKB/TrEMBL
  ENSCAFT00030029029.1 UniProtKB/TrEMBL
  ENSCAFT00040021267.1 UniProtKB/TrEMBL
  ENSCAFT00040021541.1 UniProtKB/TrEMBL
  ENSCAFT00845021305.1 UniProtKB/TrEMBL
  ENSCAFT00845021367 ENTREZGENE
  ENSCAFT00845021367.1 UniProtKB/TrEMBL
  ENSCAFT00845021427.1 UniProtKB/TrEMBL
Gene3D-CATH 2.80.10.50 UniProtKB/TrEMBL
  Spore Coat Polysaccharide Biosynthesis Protein SpsA, Chain A UniProtKB/TrEMBL
InterPro GalNAc-T UniProtKB/TrEMBL
  Glyco_trans_2-like UniProtKB/TrEMBL
  Nucleotide-diphossugar_trans UniProtKB/TrEMBL
  Ricin_B-like_lectins UniProtKB/TrEMBL
  Ricin_B_lectin UniProtKB/TrEMBL
NCBI Gene GALNT14 ENTREZGENE
PANTHER N-ACETYLGALACTOSAMINYLTRANSFERASE UniProtKB/TrEMBL
  POLYPEPTIDE N-ACETYLGALACTOSAMINYLTRANSFERASE 14 UniProtKB/TrEMBL
Pfam Glycos_transf_2 UniProtKB/TrEMBL
  Ricin_B_lectin UniProtKB/TrEMBL
PROSITE RICIN_B_LECTIN UniProtKB/TrEMBL
SMART RICIN UniProtKB/TrEMBL
Superfamily-SCOP SSF50370 UniProtKB/TrEMBL
  SSF53448 UniProtKB/TrEMBL
UniProt A0A8C0LLJ4 ENTREZGENE
  A0A8C0RL41 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0SAW0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0YVS9_CANLF UniProtKB/TrEMBL
  A0A8I3NFH5_CANLF UniProtKB/TrEMBL
  A0A8I3NKX0_CANLF UniProtKB/TrEMBL
  A0A8I3NLX8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0N804_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:41089 ENTREZGENE
1 to 39 of 39 rows