Advanced Search (OLGA)

Gene: SRP68 (signal recognition particle 68) Canis lupus familiaris

Analyze

Symbol:

SRP68

Name:

signal recognition particle 68

RGD ID:

12350578

Description:

ENCODES a protein that exhibits ribosome binding (ortholog); INVOLVED IN response to xenobiotic stimulus (inferred); SRP-dependent cotranslational protein targeting to membrane (inferred); ASSOCIATED WITH Arsenic Poisoning (ortholog); Craniofacial Abnormalities (ortholog); Severe Congenital Neutropenia 10 (ortholog); FOUND IN cytoplasm (inferred); cytosol (inferred); endoplasmic reticulum (inferred)

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

68kDA subunit of signal recognition particle; Signal recognition particle 68 kDa protein; signal recognition particle subunit SRP68

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	4,567,613 - 4,604,230 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	4,567,628 - 4,604,229 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	5,248,155 - 5,284,753 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	5,237,963 - 5,274,616 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	5,237,938 - 5,274,617 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	5,277,889 - 5,314,511 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	5,387,171 - 5,423,963 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	5,447,876 - 5,484,483 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Arsenic Poisoning (ISO)

Craniofacial Abnormalities (ISO)

Severe Congenital Neutropenia 10 (ISO)

skin disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

response to xenobiotic stimulus (IEA)

SRP-dependent cotranslational protein targeting to membrane (IBA,IEA)

Cellular Component

cytoplasm (IEA)

cytosol (IEA,TAS)

endoplasmic reticulum (IEA)

focal adhesion (IEA)

nucleolus (IEA)

nucleus (IEA)

signal recognition particle (IEA)

signal recognition particle, endoplasmic reticulum targeting (IBA,IEA)

Molecular Function

7S RNA binding (IEA)

endoplasmic reticulum signal peptide binding (IEA)

protein binding (ISO)

protein domain specific binding (IEA)

ribosome binding (IEA,ISO)

RNA binding (IEA)

signal recognition particle binding (IBA,IEA)

References

Additional References at PubMed

PMID:1702390	PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

SRP68
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	4,567,613 - 4,604,230 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	4,567,628 - 4,604,229 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	5,248,155 - 5,284,753 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	5,237,963 - 5,274,616 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	5,237,938 - 5,274,617 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	5,277,889 - 5,314,511 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	5,387,171 - 5,423,963 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	5,447,876 - 5,484,483 (+)	NCBI		UU_Cfam_GSD_1.0

SRP68
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	76,038,785 - 76,072,517 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	76,038,775 - 76,072,517 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	74,034,866 - 74,068,598 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	71,546,786 - 71,580,202 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	17	71,546,785 - 71,580,202	NCBI
Celera	17	70,625,234 - 70,658,709 (-)	NCBI		Celera
Cytogenetic Map	17	q25.1	NCBI
HuRef	17	69,460,472 - 69,494,337 (-)	NCBI		HuRef
CHM1_1	17	74,099,778 - 74,133,532 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	17	76,931,916 - 76,965,649 (-)	NCBI		T2T-CHM13v2.0

Srp68
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	116,135,992 - 116,165,043 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	116,135,992 - 116,165,043 (-)	Ensembl		GRCm39 Ensembl
GRCm38	11	116,245,166 - 116,274,217 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	116,245,166 - 116,274,217 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	116,106,480 - 116,135,531 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	116,061,256 - 116,090,307 (-)	NCBI		MGSCv36	mm8
Celera	11	128,009,838 - 128,038,857 (-)	NCBI		Celera
Cytogenetic Map	11	E2	NCBI
cM Map	11	81.06	NCBI

Srp68
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	101,980,089 - 102,006,913 (-)	NCBI		GRCr8
mRatBN7.2	10	101,481,213 - 101,508,035 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	101,481,212 - 101,508,035 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	106,537,988 - 106,564,817 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	106,001,083 - 106,027,907 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	101,402,126 - 101,428,953 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	105,123,324 - 105,150,080 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	105,123,327 - 105,228,547 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	104,880,932 - 104,893,428 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Rnor_5.0	10	104,791,132 - 104,818,635 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	106,359,742 - 106,387,284 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	106,374,244 - 106,401,790 (-)	NCBI
Celera	10	100,054,016 - 100,080,844 (-)	NCBI		Celera
Cytogenetic Map	10	q32.1	NCBI

Srp68
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955506	6,178,184 - 6,222,388 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955506	6,178,184 - 6,220,255 (+)	NCBI	ChiLan1.0	ChiLan1.0

SRP68
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	92,080,303 - 92,114,306 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	96,905,515 - 96,939,413 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	69,985,207 - 70,019,313 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	75,539,484 - 75,572,358 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	75,539,484 - 75,573,436 (-)	Ensembl	panpan1.1		panPan2

Srp68
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	5,181,208 - 5,222,708 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936594	1,189,251 - 1,231,014 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936594	1,189,245 - 1,230,747 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SRP68
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	5,367,863 - 5,406,347 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	5,368,354 - 5,402,491 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	5,346,094 - 5,357,765 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SRP68
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	45,607,216 - 45,649,357 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	16	45,607,329 - 45,651,086 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666077	16,354,484 - 16,397,153 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Srp68
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624801	5,928,628 - 5,978,879 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624801	5,931,332 - 5,978,656 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in SRP68
369 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001003271	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022422538	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000091	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000103	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000313	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	X53744	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000008082 ⟹ ENSCAFP00000007483

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	9	4,567,628 - 4,604,229 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000063990 ⟹ ENSCAFP00000052812

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	9	4,567,628 - 4,604,229 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000078249 ⟹ ENSCAFP00000044915

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	9	4,567,628 - 4,604,229 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845036168 ⟹ ENSCAFP00845028300

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	9	5,237,938 - 5,274,617 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845036295 ⟹ ENSCAFP00845028405

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	9	5,237,938 - 5,274,617 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845036394 ⟹ ENSCAFP00845028488

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	9	5,237,961 - 5,274,613 (+)	Ensembl

RefSeq Acc Id:

NM_001003271 ⟹ NP_001003271

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	9	4,567,628 - 4,604,229 (+)	NCBI
Dog10K_Boxer_Tasha	9	5,248,155 - 5,284,753 (+)	NCBI
ROS_Cfam_1.0	9	5,237,963 - 5,274,616 (+)	NCBI
UMICH_Zoey_3.1	9	5,277,889 - 5,314,511 (+)	NCBI
UNSW_CanFamBas_1.0	9	5,387,171 - 5,423,963 (+)	NCBI
UU_Cfam_GSD_1.0	9	5,447,876 - 5,484,483 (+)	NCBI

Sequence:

show sequence

GGCAAGATGGCTGCCGAGAAACAGGTTCCCGGTGGCGGCGGCGGCGGCGGCGGCGGGAGCGGCG
GCGGACGCGGTGCCGGAGGAGAGGAAAATAAGGAAAACGAACGGCCTTCAGCTGGATCGAAGGC
AAACAGAGAATTCGGGGATAGCCTGAGTTTGGAGATTCTTCAGATAATTAAGGAATCCCAGCAG
CAGCATGGTTTGCGGCATGGAGATTTTCAGAGGTATAGGGGCTACTGTTCCCGTAGACAAAGAC
GTCTTCGGAAAACACTCAACTTCAAGATGGGGAACAGGCACAAATTTACAGGGAAAAAAGTAAC
TGAAGACCTTCTGACTGATAACAGATATTTGCTTCTGGTTCTGATGGATGCTGAACGAGCCTGG
AGCTATGCCATGCAGCTGAAACAGGAAGCCAACACTGAACCCCGAAAACGTTTCCACTTGTTGT
CTCGCCTTCGCAAAGCTGTGAAGCATGCGGAGGAATTGGAACGCTTGTGTGAGAGCAATCGCGT
GGATGCCAAGACCAAGTTAGAGGCTCAGGCTTACACGGCTTACCTCTCAGGAATGCTGCGTTTT
GAACATCAAGAATGGAAAGCTGCGATTGAGGCTTTTAACAAGTGCAAAACTATCTATGAGAAAC
TAGCCAGTGCTTTCACAGAAGAGCAGGCTGTGCTATACAACCAACGTGTGGAAGAGATCTCGCC
TAATATCCGCTACTGTGCATATAACATTGGGGACCAGTCAGCTATCAATGAACTCATGCAGATG
AGATTGAGGTCTGGAGGCACTGAGGGTCTCCTGGCTGAAAAATTGGAGGCATTGATCACTCAGA
CTCGGGCCAAACAGGCAGCCACCATGAGCGAAGTGGAATGGAGAGGGAGAACGGTTCCAGTGAA
GATTGACAAAGTGAGGATCTTTTTGTTGGGATTGGCTGATAACGAAGCAGCCATTGCCCAGGCT
GAAAGTGAAGAAACCAAGGAGCGTCTGTTTGAATCAATGCTCAGTGAGTGTCGGGACGCCATCC
AGGCTGTTCGGGAAGAGCTCAAGCCAGATCAGAAACAGAGAGATTACACCCTTGACGGGGAGTC
GGGAAAGGTATCTAATCTTCAATACCTGCACAGCTACCTGACTTATATCAAGCTGTCAACGGCC
ATCAGGCGGAACGAGAACATGGCTAAGGGGCTGCAGAAAGCACTACAGCAGCAGCCAGAAGATG
AGAGCAAGCGCTCGCCACGGCCCCAGGACCTCATCCGGCTCTATGACATCATTCTACAGAATCT
GGTGGAATTGCTCCAGCTTCCTGGGTTAGAGGAGGACAGAGCCTTCCAGAAAGAGATAGGCCTC
AAGACTCTGGTGTTTAAGGCTTACAGGTGTTTTTTCATTGCTCAGTCCTATGTGTTGGTGAAGA
AGTGGAGCGAAGCCCTCGTCCTGTATGACCGAGTCCTGAAATATGCAAATGAAGTAAATTCGGA
TGCTGGGGCCTTCAGGAACAGCTTAAAGGACCTGCCCGATGTGCAAGAGCTCATCACTCAAGTG
AGGTCAGAAAAGTGTTCTCTGCAGGCAGCAGCAATCCTGGATGCAAGTGACTCCCACCAACCGG
AGACTTCTTCCCAAGTCAAGGACAACAAGCCTCTGGTTGAACGGTTTGAGACATTCTGCTTGGA
CCCTTCCCTCGTCACCAAGCAAGCCAACCTTGTGCACTTCCCGCCAGGATTCCAGCCTATCCCC
TGCAAGCCTTTGTTCTTTGACCTGGCCCTCAACCATGTGGCTTTCCCACCCCTCGAGGACAAGT
TGGAGCAGAAGACCAAGAGTGGCCTCACTGGATACATCAAGGGCATCTTTGGATTCCGGAGCTA
ACCAGGCTCTTCTTGGGGGCAAGGGGAGATTCTCACTCTTCATCTGTATTGTGAGAAAACCCTA
GCAAGTTCCATGATATTAAATCCAGGTCTGCATTGGCCCCGGGCAAGAGTGTATCATCCTCAGC
CCTGCGTCCCTATGTCTTGTGTGTTTGTGCACTTAACATTCTTAACCGGTGTGCTCAAAGGGGA
CCCTGCTGTCTTCTGGTGGATGTGTGCGGGATTCCTCTGTCCGCACCTCCTGGGGGAAGGGCCA
CTGCCACCTGGCCCCATGGGAGCCGTGCTTGGGTGGGTCCACTCCAGGCATAGATGGGAGCTCG
GAACTTTGTCGTGTTTCTTCAGTATCACGAATTTGAAATGGACTCCTCCTCGCTGTGAGCATCC
ATCCAGAGTCCCGTGAAGAGTCTGTGACCAGGAACCACTGGCAGCATCACCCCACAACTACAGT
CAGCCTTATGCCCTGTCACCTCCAAGTGGAAGTTAAGTTTCAGAACAAGCAAAGAGCTCTATTT
TTAGAAGAAATGTGTTACACTCAGAAATGATGAAAACAAATCTTATATTAAAAGGCAAAGATGC
TGG

hide sequence

Protein Sequences


Protein RefSeqs	NP_001003271	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	CAA37773	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000007483.3
	ENSCAFP00000044915.1
	ENSCAFP00000052812.1
	ENSCAFP00030001507.1
	ENSCAFP00030001535.1
	ENSCAFP00040001787.1
	ENSCAFP00040001800.1
	ENSCAFP00845028300
	ENSCAFP00845028300.1
	ENSCAFP00845028405.1
	ENSCAFP00845028488.1
GenBank Protein	Q00004	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001003271 ⟸ NM_001003271

- UniProtKB:

A0A8C0LWP4 (UniProtKB/TrEMBL), A0A8C0JZI7 (UniProtKB/TrEMBL), A0A8P0SAL1 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAAEKQVPGGGGGGGGGSGGGRGAGGEENKENERPSAGSKANREFGDSLSLEILQIIKESQQQH
GLRHGDFQRYRGYCSRRQRRLRKTLNFKMGNRHKFTGKKVTEDLLTDNRYLLLVLMDAERAWSY
AMQLKQEANTEPRKRFHLLSRLRKAVKHAEELERLCESNRVDAKTKLEAQAYTAYLSGMLRFEH
QEWKAAIEAFNKCKTIYEKLASAFTEEQAVLYNQRVEEISPNIRYCAYNIGDQSAINELMQMRL
RSGGTEGLLAEKLEALITQTRAKQAATMSEVEWRGRTVPVKIDKVRIFLLGLADNEAAIAQAES
EETKERLFESMLSECRDAIQAVREELKPDQKQRDYTLDGESGKVSNLQYLHSYLTYIKLSTAIR
RNENMAKGLQKALQQQPEDESKRSPRPQDLIRLYDIILQNLVELLQLPGLEEDRAFQKEIGLKT
LVFKAYRCFFIAQSYVLVKKWSEALVLYDRVLKYANEVNSDAGAFRNSLKDLPDVQELITQVRS
EKCSLQAAAILDASDSHQPETSSQVKDNKPLVERFETFCLDPSLVTKQANLVHFPPGFQPIPCK
PLFFDLALNHVAFPPLEDKLEQKTKSGLTGYIKGIFGFRS

hide sequence

Ensembl Acc Id:

ENSCAFP00000044915 ⟸ ENSCAFT00000078249

Ensembl Acc Id:

ENSCAFP00000052812 ⟸ ENSCAFT00000063990

Ensembl Acc Id:

ENSCAFP00000007483 ⟸ ENSCAFT00000008082

Ensembl Acc Id:

ENSCAFP00845028405 ⟸ ENSCAFT00845036295

Ensembl Acc Id:

ENSCAFP00845028300 ⟸ ENSCAFT00845036168

Ensembl Acc Id:

ENSCAFP00845028488 ⟸ ENSCAFT00845036394

Promoters

RGD ID:

13684412

Promoter ID:

EPDNEW_C2482

Type:

initiation region

Name:

SRP68_1

Description:

signal recognition particle 68

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	9	4,567,608 - 4,567,668	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000005027	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030000966	UniProtKB/TrEMBL
	ENSCAFG00040001082	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ENSCAFG00845020322	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000008082.5	UniProtKB/TrEMBL
	ENSCAFT00000063990.2	UniProtKB/TrEMBL
	ENSCAFT00000078249.2	UniProtKB/TrEMBL
	ENSCAFT00030001690.1	UniProtKB/TrEMBL
	ENSCAFT00030001721.1	UniProtKB/TrEMBL
	ENSCAFT00040002094.1	UniProtKB/Swiss-Prot
	ENSCAFT00040002110.1	UniProtKB/TrEMBL
	ENSCAFT00845036168	ENTREZGENE
	ENSCAFT00845036168.1	UniProtKB/TrEMBL
	ENSCAFT00845036295.1	UniProtKB/TrEMBL
	ENSCAFT00845036394.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.3450.40	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	SRP68	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SRP68-RBD	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SRP68_N_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	cfa:403952	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene	SRP68	ENTREZGENE
PANTHER	PTHR12860	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SIGNAL RECOGNITION PARTICLE SUBUNIT SRP68	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	SRP68	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PIRSF	SRP68	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A8C0JZI7	ENTREZGENE
	A0A8C0LWP4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0LYW2_CANLF	UniProtKB/TrEMBL
	A0A8C0PQ16_CANLF	UniProtKB/TrEMBL
	A0A8I3P5C8_CANLF	UniProtKB/TrEMBL
	A0A8I3P8A8_CANLF	UniProtKB/TrEMBL
	A0A8I3PK44_CANLF	UniProtKB/TrEMBL
	A0A8P0P2H7_CANLF	UniProtKB/TrEMBL
	A0A8P0SAL1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0SY89_CANLF	UniProtKB/TrEMBL
	Q00004	ENTREZGENE, UniProtKB/Swiss-Prot
VGNC ID	VGNC:46808	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM