Advanced Search (OLGA)

Gene: ARHGEF17 (Rho guanine nucleotide exchange factor 17) Canis lupus familiaris

Analyze

Symbol:

ARHGEF17

Name:

Rho guanine nucleotide exchange factor 17

RGD ID:

12330912

Description:

ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (inferred); INVOLVED IN actin cytoskeleton organization (ortholog); ASSOCIATED WITH 3-methylglutaconic aciduria type 7b (ortholog); intellectual disability (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

Rho guanine nucleotide exchange factor (GEF) 17

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	21	24,859,789 - 24,919,733 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	21	24,862,295 - 24,919,667 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	21	24,624,255 - 24,684,026 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	21	25,066,371 - 25,126,293 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	21	25,067,480 - 25,126,278 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	21	24,860,084 - 24,919,836 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	21	25,061,078 - 25,120,836 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	21	24,976,292 - 25,036,151 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

3-methylglutaconic aciduria type 7b (ISO)

intellectual disability (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

actin cytoskeleton organization (IBA,IEA,ISO)

Cellular Component

cytoplasm (IBA)

Molecular Function

guanyl-nucleotide exchange factor activity (IBA,IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

ARHGEF17
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	21	24,859,789 - 24,919,733 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	21	24,862,295 - 24,919,667 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	21	24,624,255 - 24,684,026 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	21	25,066,371 - 25,126,293 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	21	25,067,480 - 25,126,278 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	21	24,860,084 - 24,919,836 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	21	25,061,078 - 25,120,836 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	21	24,976,292 - 25,036,151 (-)	NCBI		UU_Cfam_GSD_1.0

ARHGEF17
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	73,308,276 - 73,369,388 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	73,308,276 - 73,369,388 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	73,019,321 - 73,080,433 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	72,697,317 - 72,757,784 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	11	72,697,316 - 72,757,783	NCBI
Celera	11	70,324,908 - 70,385,824 (+)	NCBI		Celera
Cytogenetic Map	11	q13.4	NCBI
HuRef	11	69,314,967 - 69,375,701 (+)	NCBI		HuRef
CHM1_1	11	72,903,220 - 72,964,018 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	11	73,237,439 - 73,298,525 (+)	NCBI		T2T-CHM13v2.0

Arhgef17
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	100,518,953 - 100,581,368 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	100,518,959 - 100,581,314 (-)	Ensembl		GRCm39 Ensembl
GRCm38	7	100,869,746 - 100,932,161 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	100,869,752 - 100,932,107 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	108,018,260 - 108,080,675 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	100,743,833 - 100,806,248 (-)	NCBI		MGSCv36	mm8
Celera	7	101,220,490 - 101,283,194 (-)	NCBI		Celera
Cytogenetic Map	7	E2	NCBI
cM Map	7	54.45	NCBI

Arhgef17
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	164,642,690 - 164,702,241 (-)	NCBI		GRCr8
mRatBN7.2	1	155,230,607 - 155,290,163 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	155,233,168 - 155,290,498 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	163,216,030 - 163,275,609 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	170,396,134 - 170,455,716 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	163,280,195 - 163,339,916 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0 Ensembl	1	165,911,718 - 165,967,069 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	172,105,535 - 172,164,079 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	158,316,868 - 158,375,737 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	158,399,688 - 158,454,770 (-)	NCBI
Celera	1	153,312,407 - 153,371,361 (-)	NCBI		Celera
Cytogenetic Map	1	q32	NCBI

Arhgef17
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955414	18,102,291 - 18,172,477 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955414	18,100,907 - 18,172,905 (-)	NCBI	ChiLan1.0	ChiLan1.0

ARHGEF17
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	74,251,180 - 74,314,441 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	75,297,877 - 75,358,500 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	68,386,143 - 68,445,893 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	71,605,498 - 71,667,001 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	71,605,832 - 71,665,476 (+)	Ensembl	panpan1.1		panPan2

Arhgef17
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	60,912,463 - 60,970,953 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936498	2,511,986 - 2,571,680 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936498	2,511,516 - 2,570,481 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ARHGEF17
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	9	7,766,701 - 7,826,513 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	8,475,616 - 8,490,736 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ARHGEF17
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	64,553,134 - 64,613,573 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	64,552,842 - 64,616,112 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666043	61,272,624 - 61,333,644 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Arhgef17
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624817	3,579,841 - 3,640,801 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624817	3,582,665 - 3,641,258 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in ARHGEF17
497 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005633536	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038430176	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038505537	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038568710	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038632883	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000238	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000059	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000057	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000009046 ⟹ ENSCAFP00000008390

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	21	24,862,295 - 24,919,667 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000047227 ⟹ ENSCAFP00000042807

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	21	24,862,295 - 24,885,283 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845014901 ⟹ ENSCAFP00845011551

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	21	25,067,480 - 25,091,324 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845014973 ⟹ ENSCAFP00845011610

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	21	25,067,493 - 25,126,278 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845015227 ⟹ ENSCAFP00845011823

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	21	25,067,493 - 25,126,278 (-)	Ensembl

RefSeq Acc Id:

XM_005633536 ⟹ XP_005633593

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	21	24,859,789 - 24,919,733 (-)	NCBI
Dog10K_Boxer_Tasha	21	24,624,255 - 24,684,026 (-)	NCBI

Sequence:

show sequence

GGGGGCGCGCAGGGGGGGTTGGCCGCGGCTCCCCGAGGCCGGCCCCCCCGGGGTGAGCGCTGCA
CCATGGCGGACGGGGCGCCCCGCTCCCCGCTCCATCGCAGCGTCTCGTTCAAGCTGCTGGAACG
CTGGAGCGGCGGGCCCGGGCCGAAGGAGGCGGCCTCGGACACCCCCGGGCTGCGGCGCCGCGCC
TCGTGCCGGCCGGCCGCGTCGGTCCCGGGCCAGCCCTCCCGGCGCGTGTCCAAACTGGCGTCGG
GGCCCCCGGCCGCCCCCGCGCAGCCGCGCCCGCTCCGCAGCCTCTCGCCGTCGGTGCGCCAGCT
CTCCCGGCGCTTCGACGCGCCGCGCCCGGACGACGACCACGCCGGGGCCCGAGACGGGGGCGTC
TCCCCCGGGGCCGCGGAAGAAGCGGCGGAGGGCGCCGCGCGCGGGGCCTGGCCCAGCGTCACCG
AGATGCGCAAGCTCTTTGGGGGCCCGGGCTCCAGGCGGCCCAGCGCCGACTCTGAGGCCTCGGG
GACGCCCAGCCCCGACGGCGCAGGGTGGGAGCCCCCGGCTCGCGAACCCCGGCAGCCACCGACG
CCACCTCCTCGGACGTGCTTCCCCCTGGCGGGCCTGCGTTCCGCGCGGCCGCTGCCCGGCCCGG
GGACCGAGGGGAGGAGGCGGCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGCGGGCGCAGCG
TCCGGCGGATGGTTTACATTCTTGGCATAGCTTCTCCCAACCGCAGGCCGGGGCCGGGGCCCGG
GCCTCCTGCTCCTGCTCCTCCTCCATCGCCTCCTCCTATCCTGTCAGCCGCGGCCGGGCTGCCA
GCTCCAGCGAGGAGGAAGAGGAGGGCCCGCCGCCGCCGCCGCCCGGGGCTCAGAGTCCGGCCTA
CCACGGAGGCCACTCCTCGGGCAGTGACGAGGACCGAGACGGTGAGGGCGGCCACCGCTGGNGA
GGGAGGCCGGGACCCAGGCCTGGAAGCTCCCTCTCGGATAAGAACTGTAGGCCAGACAGTTATG
GGTTAAATCTGGGCAGCATGGACTCAGCAGGGGGAGCCAGGAGTCCGGAGCCCCCCAAGTCTCC
TAGTGAGGAAGGACCCCCGGAGTGGGGTACTGGCTCACCTCCCGGTGTACCAGGTCCTCAGGAG
GGACTCCGGCCCATGTCTGACTCTGGGGGGGCAGCTTTCCGTGTGGCCAAGGTGAGCTTTCCTG
CATACCTAGCCAGTCCGGCAGGCTCCCGTGGCAGCAGCCGTTATTCCAGCACAGAGACCCTCAA
GGATGAAGACCCATGGGCTAGTCGGGGTTCTGGGGGCTGGGGCATGTATCGCTCCCCTAGCTTT
GGAGCTGGAGAAGGGCTTCTCCTAAGGCCCCAGCCTCGACTCCGCACCAAGGGGGCTGTGGGCA
CCACAAGGGCATTGAGAGATGGAGGACTGGAGTTGGACCAGAGCCGGCAGCGCAAGTCCCTGTC
GAATCCAGATATTGCCTCGGAGACCCTGACACTGCTCAGTTTCCTCCGCTCAGATCTCTCAGAG
CTGCGAGTCCGAAAGCCCAGTGGGCGCCCCAGTGACCTTGGGAGCAGCCCCTTAGATGGCAGAG
ACTCACCATCAGCAGGTGGCCCTGGGGCACAACTTGGACCTGTGCCTGCTCCAGCTCCCGCATC
ACCTGGCACCCGCCCCACACTCAAAGACTTGACGGCCACCCTGCGGAGGGCAAAGTCTTTTACT
TGCTCTGAGAAGCCCATGGCCCGACGCCTATGCCGCACCAGTACCCTGAAGCCCAGCTCCTCTG
AGCTCCTGCTGGCAGGCCCCAGTGCCGAGGAGGACCCACTGCCCCTCGTTGTCCAGGATCAGTA
TGTACAGGAGGCCCGTCAGGTGTTTGAGAAGATCCAGCGAATGGGTGCCCAGCAGGATGACGGC
AGTGATGTGCCCCCTGGAAGCCCTGACTGGGCGGGAGACGTGACCCAAGGGCAGCGGTCCCAGG
AGGAGCTCTCTGGCCCTGAGTCTAGCCTGACAGATGAGGGCATTGGGGCAGACCCTGAGCCTCT
GGTTTCAGCCTTTTGCAGCCTGGGTACCACAGGGGTGTGGCGACCCCTTTCCTCATCCTCAGCC
CAGACCAACCACCATGGCCCTGGGGCAGAAGATAGTCTGGGAGGATGGGCCCTGGTGTCCCCTG
ACACCCCTCCCACACCAGGTGCCCTCCGACGGAGACGCAAAGTCCCTCCTTCAGGCCCTGGTGG
GACTGAATTGAGCAATGGGGAGGCGGGTGAGGCCTACCGGTCTCTGAGTGACCCAATTCCACAG
CGCCACCGGGCCGCCACCTCTGAGGAGCCCTCTGGGTTCTCCGTGGATAGCAACCTTTTAGGCT
CGCTGAGCCCCAAGGCAGGGCTTCCAGTGGCCCCAGCTGTGGATGAGGGCTTGACCAGTGGCCA
CAGTGACTGGTCAGTGGGCAGTGAAGAGAGCAAGGGTTACCAGGAGGTTATTCAGAGTATTGTT
CAGGGGCCTGGAGCTTTGGGGCGCGTGGTGGACGACAGGGTTGCTGGCAAAGCCCCCAAGAAGA
AATCTCTGAGTGATCCCAGCCGTCGTGGGGAGCTGGCTGGGCCTGGATTTGAAGGCCCTGGTGG
GGAGCCCATCCGAGAAGTCGAGCCCATGCTGCCTCCATCTAGCAGTGAGCCCATTCTTGCAGAG
CGGCGGGCAGAACCAGAAGAGCCCAGTGCTGCGAGGGGCCGGGCACAGTCTGAGAGGGCCCTAC
CCAAGACCCGAGCCGCCTCCTCCACTGCCCACCGTGACTTCCACCTTGACCCGAAACTGGCTGA
TGTCCTGTCCCCACGGCTCATCCGACGGGGTTCCAAGAAGCGCCCAGCCCGGAGCAGTCATCAG
GAACTACAGAGAGAGGAAGCCGATGAGGACCAGACTAGCAGCCTGTCTCGGGCCCGACCATCCT
CCAAACACGTTCGCCACGCGAGTGTGCCCGCCACCTTCACACCTATTGTGGTGCCTGAGCCACC
AACTTCCATTGGCCCCCCCGTGGCTGTGCCAGAGCCTGTGGGCTTCCCTGCCAGAGCCCACTCC
ACACTGCAGGCCCCATCACTCGAGGATGTCACTAAGCAGTATATGCTGACCCTCCACTCTGGCG
AGGTTCCTGCCCCAGTACCAGTGGATATGCCCTGCTTGACTCCTGTTGCACTGCCCTCTGCTGA
GGCCAAGCCCCCCGAGACAGCCCGGGCTCCAGATGAGCCTGCCCAGGCCAGCAAGTGCTGCAGC
AAGCCACAGGTGGACATGCGGAAGCACGTGACCATGACCCTGCTGGACACAGAGCAGTCGTATG
TGGAGTCGCTGCGCACCTTGATGCAGGGCTACATGCAGCCACTGAAGCAGCCAGAGAACTCCTT
GCTGTGTGACCCATCGCTGGTGGATGAAATCTTCGACCAGATCCCTGAGCTCCTGGAGCATCAT
GAACAATTCCTAGAGCAGGTGCGGCACTGTGTGCAGACCTGGCATGCCCAGCAGAAGGTGGGAG
ACCTGCTTGTCCAGTCGTTCTCCAAGGACGTCCTGGTCAACATCTATTCTGCCTACATTGATAA
CTTTCTCAATGCAAAGGATGCCGTGCGTGTGGCTAAGGAGGCAAGGCCTGCCTTTCTCAAGTTC
TTGGAGCAAAGCATGCGTGAGAACAAGGAGAAGCAGGCACTGTCTGACCTCATGATCAAGCCTG
TGCAGCGGATCCCACGCTATGAACTTCTGGTGAAGGACCTCCTGAAGCACACACCTGAGGACCA
CCCAGACCACCCACTCCTGCTGGATGCTCAGCGGAACATCAAACAGGTGGCTGAACGCATCAAC
AAGGGTGTGCGGAGTGCTGAGGAGGCAGAGCGACATGCCCGTGTGCTGCAGGAAATTGAGGCTC
ACATCGAGGGCATGGAGGATCTCCAAGCCCCTCTGCGGCGGTTCCTAAGGCAGGAGATGGTCAT
TGAAGTGAAGGCAGTCGGTGGCAAGAAGGACCGGTCCCTCTTCCTGTTCACGGATCTCATTGTC
TGCACCACCCTGAAGCGGAAGTCGGGCTCCCTGCGGCGCAGCTCCATGAGCCTGTACACGGCAG
CCAGTGTCATTGACACAGCCAGCAAGTATAAGCTGCTATGGAAGCTGCCTCTGGAAGATGCGGA
CATCATCAAAGGGGCATCCCAGGCCACCAATCGGGAGAACATCCAGAAAGCTATCAACCGCCTA
GATGAGGACCTGACCACCCTAGGCCAAATGAGCAAGCTCTCTGAGAGCCTTGGTTTCCCTCACC
AGAGCCTGGATGAAGCGCTGCGGGACCTCTCAGCCGCCATGCACCGGGACCTGTCGGAGAAGCA
GGCACTGTGCTATGCACTGTCCTTCCCCCCTACCAAGCTGGAGCTGTGCGCCACGAGGCCTGAA
GGCACTGACTCCTTCATCTTTGAGTTCCCTCACCCTGACGCCCGCCTCGGCTTCGAGCAGGCCT
TTGATGAGGCCAAGAGGAAGCTGGCATCCAGCAAAAGCTGTCTAGACCCTGAATTCCTGAAGGC
CATCCCCATCATGAAAACCCGCAGTGGCATGCAGTTCTCTTGTGCGGCCCCGACCCAGAGTAGC
TGCCCCGAGCCCATGCCTGAAGTGTGGGTGTGCAACAGCGATGGCTACGTGGGCCAGGTGTGCC
TGCTGAGCCTGCGTGCTGAGCCGGACGTGGAAGCCTGCATTGCCGTCTGCTCTGCCCGCATCCT
CTGCATTGGCGCAGTGCCAGGTCTGCAGCGCCGCGGCCACAGGGAGCAGCCTGCCTCCCTGAGG
AATCCCCCAGAGACGGCAATGGAGACCCCCGGTCCAGAACTGGACGTTGAGGCCACAGACGAAG
AAGCAGCGACACTGGCAGAGCCTGGGCCCCAGCCCTGCCTGCACATCTCCATTGCTGGCTCGGG
GCTGGAGATGGCACCAGGCCCCGCCGGAGGGGATCCCCGCCCAGAATTGGTGCCCTTTGATAGT
GACTCTGATGATGAGTCTTCGCCCAGCCCCTCGGGAACCCTGCAGAGCCAAGCCAGCCGGTCCA
CCATCTCCTCCAGCTTTGGCAATGAGGAGACCCCGAGCTCCAAGGAGGCCACGGCAGAGACGAC
CAGTTCAGAGGAGGAGCAGGAGCCCGGCTTCCTGCCACTGTCTGGCTCCTTCGGGCCTAGCGGT
CCCTGCAGCACCAGCCCGATGGATGGGAGAGCCCTTCGCCGCTCCAGCCATGGCTCCTTCACCC
GGGGCAGCCTTGAGGACCTGCTGAGCGTTGACCCCGAGGCCTACCAGAGCTCTGTGTGGCTGGG
CACTGAGGATGGCTGTGTCCACGTATACCAGTCCTCCGACAGCATCCGCGACCGCAGGAACAGC
ATGAAGCTCCAGCACGCAGCCTCTGTGACCTGCATCCTGTATCTGAATAACCAGGTGTTTGTGT
CTCTGGCCAATGGAGAACTTGTGGTCTACCAAAGAGAAGCAGGCCATTTCTGGGACCCTCAGAA
CTTCAAGTCAGTGACCCTGGGTTCTCAGGGGAGCCCGATCACCAAGATGGTGTCTGTTGGTGGG
CGGCTGTGGTGTGGCTGCCAAAACCGAGTCCTTGTCTTGAGCCCTGACACGCTGCAGCTAGAGC
ACACGTTCTACGTGGGCCAGGATTCCAGCCGCAGCGTGGCTTGTATGGTAGACTCCAGCCTGGG
TGTATGGGTGACATTGAAAGGCAGTGCCCACGTGTGTCTCTACCATCCAGACACCTTTGAGCAG
CTGGCTGAGGTGGACGTCACACCTCCCGTGCACAGGATGCTGGCAGGCTCGGACGCCATCATCC
GGCAGCACAAGGCCGCCTGCCTGAGGATCACAGCGCTGCTGGTGTGCGAAGAACTGCTGTGGGT
GGGCACCAGTGCTGGCGTCGTGCTCACCATGCCCACCTCACCCAGTACCGTTAGCTGCCCGCGA
GCACCCCTTAGCCCTGCTGGCCTAGGCCAGGGACATACTGGCCACGTCCGCTTCTTGGCTGCAG
TCCAACTGCCAGATGGCTTCAACCTGCTTTGTCCAACCCCACCACCTCCCCCAGACACCGGCCC
TGAGAAGCTGCCATCCCTGGAGCACCGGGACTCCCCTCGGAACCGAGGACCTGCCTCAGCCAGG
CCAAAAATGCTGGTTATCAGTGGAGGTGACGGCTATGAGGACTTCCGACTCAGCAGTGGGGGTG
GTGGCAGCAGCGAGACTGTGGGCCGGGACGACAGCACAAACCACCTCCTCCTATGGAGGGTGTG
ACCCTGTCCACCATGGCGCAGGACTTGCCCGCCCACCTGCCCTCAGCCCGCTTGCCTCTTCCTA
GCCCACACTTCCTAGCAGACTCTGACCAGGAGCGTCCCACCAGGGGCACGCCTATGCCTGCGTG
GGCTCCCTCCCATCCCCACAGAAGTATTCCTGATGGAACACCTGCTGGCCGGTGGGCCAAGGCC
TTTCCCAACCTTCTGGCTGCTTCGGTGCTCCCATTCATGATGGGGGTGCAGTAGGGGGCGTGTG
GGCTGCCCAGGACCTCTGTCCCTGGAGCTTCTACCAAAGACACGGCCGGGCCTTGACCCCACAG
GGCTGGGGAGGGCCATGTGCAATATTTGGAGGGTTTTCTGGGGGCAGTGGGAGGGCTGAGGATG
AACCCTTTCCCATGTACAGTATTTATGTTCCTTTTTAGATGTGTACCTTCCCAAGCACTTATTT
ATGCAATGACCTGGGCAGGGGGTGATCTGAGGAAGTAACAGAAGGGAAAAAAACCCTAATCCTG
CTCTGGGGGCCACCTGGGACCCTAGGCAAGCCTTCCCGGAAGGACCAGTCCCCCCTCATTATAT
TTGCGCACATGTGTGCGCATACACATGGGTTCGTACGTGCGTACCCACGCACACACAAACGCAC
ACACACACACACACGCACACACACACACTGCATGTTCAGGGCACTAAAAGATTGCCTCCTAACG
TATACTTTCCACGGCCTTGTCCTGATTGGGCTGCCCTCCAGTATCCGGAGACCAGGAACAAGCA
CCCTCAGTCATCCAGAACAAGACAAGGACTGGAGTGGGCAGCGACTCCCATCTGGGGGCCTCCC
CAGGCCTTGGCATTTCCTAACTTGCTGGCAGTGCCTTTAGTCGTTTCCAAATTTGCTAACACTG
ATAGGGACCTGGCCAGGGGTCTCTCCTGGCCTGAGCAGGGAAGAGGAAAGGGCCCATGTCCTCC
TCAGAGTTGGCCCCCAGCCCCTATGTCTCATGCACTGGTGTGTATGGTCATCTTGGAAGGGTGG
GCCCGGGAGCCCCCTTACTCTGACCATGGAGACCCTCTCTCCACACCCTTCCTGCCAGGGCAGT
CCCTCCAGGAAGAATGCCCAACGCCGAGGGGCTGGACATGGCCTGGTCACCTGGGACCCATTTG
AGGGCAGCCTCTTCCCTGCTCCTGAGGCTGCAGGAGCCAGTCTGACCCCCAGCCCCCTCGCTTC
TTCAGCTACAGCTCCAAAGGTCTGGTTTCAGATGGGGTTTGTTTGGCTCTGTTTTTGTTTGGGG
TGCGTGGGTCATTGCGGTCTTAGATTATGTTTCTCTTGCTACCAGTCATGTATTAACTTTCCTT
GGATGATGAATTTTAAAGAGTCAATAAATAGAAACACCAAATGACCGCTCCCCATCAGTGGCGC
AGTGGCCTCCAGCCAGCAGCCTCAGGGCTCCCCAGCTGATGGGCCTCCTGGCACCCACTCACTT
GCCCAGACGGGAGGGCTCAGGGACCCAGGAGGGTGCTGGGATGGTAAGGCTGCCACTTGCTGTG
TTATCCTGGGCAGGTTGCTGCCCCTGTCTGGGCTGTAGTTCTCTCCAGTTCACTGCTTTGTAAC
CAGGGCTACATGTTAGAATCCCTTACAGACATGTGTGAATAGAAAGCATGAGACATAATCATAC
ATCCGTGTAAGTAGACATTCCCAGGCTCCCCACAGCTTCTCAGTCACTGGACCTCGGATGGGGC
TTGGGAATCCGAAAGTGACACAAGTCAAAATGAGGCAGCAGTGAAAAACGAGGCGACCAGGAGA
CGGTACGGTTCTTCCAGGAAATGATGTTCTGCAGCAAAGCCTCATATGAGGCTGGGGAATCTGA
CAAAAGCCAAGGTGACGTCAGGTTTTGGAGCAAGGGGAGAATCCAAGTCTGTCTGATTTCTGGT
CCAAAGTGATGTGTCATTAAATCAGACATGAGAATGGAAAGGCCAACCCCGGGGCACCGGCTGG
TCCACGCAGGCAGGTCTCTTCCCACCAGGTATACCCACAGAGCTCAAGAAAGCAACCACCCGTA
GAGGACAGAGCATGCCTCTGCTCTGCTGAACACTCTGGAACATTCTTCAGCCTAAGTGATTAAC
ACTTTACACAAATCGGTTGCTGAAGGAGGAGTGCAGGTTCATGCTTGACAAGCTGGTGTACACG
CATCTCGGGTCTGCTGGGCCCTCAGGGCCATAGGACGTGCATGGAGCATCTCCCTGCAGCACCA
CTTCACTTGGAAGATCTGAGGAGGAGGGGATTATATTAAACGTGTATATTCCAGAGTAGAAGGC
AATGTTCATGTGGAATTTGCGGTGAAACAAAGCAGAAAGAACACAGGCTTTGAAGCTGAACAGA
AATCTTGACTTTGCCACTAACTAGCTACGTGGCCTTGGATGAATTGCATCCCCTATAAGCCTTC
ATTTTCCCATCTGTAAAATGGGGCCAGTCCTTTCTTCCACAAAGATTTGCTCTGAAATAAAAGG
GGGGCTAACTA

hide sequence

RefSeq Acc Id:

XM_038430176 ⟹ XP_038286104

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	21	25,066,371 - 25,126,293 (-)	NCBI

RefSeq Acc Id:

XM_038505537 ⟹ XP_038361465

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	21	24,860,084 - 24,919,836 (-)	NCBI

RefSeq Acc Id:

XM_038568710 ⟹ XP_038424638

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	21	24,976,292 - 25,036,151 (-)	NCBI

RefSeq Acc Id:

XM_038632883 ⟹ XP_038488811

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	21	25,061,078 - 25,120,836 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_005633593	(Get FASTA)	NCBI Sequence Viewer
	XP_038286104	(Get FASTA)	NCBI Sequence Viewer
	XP_038361465	(Get FASTA)	NCBI Sequence Viewer
	XP_038424638	(Get FASTA)	NCBI Sequence Viewer
	XP_038488811	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000008390.5
	ENSCAFP00000042807.2
	ENSCAFP00030022292.1
	ENSCAFP00040026007.1
	ENSCAFP00040026231.1
	ENSCAFP00845011551.1
	ENSCAFP00845011610
	ENSCAFP00845011610.1
	ENSCAFP00845011823.1

RefSeq Acc Id:

XP_005633593 ⟸ XM_005633536

- UniProtKB:

A0A8P0N887 (UniProtKB/TrEMBL), A0A8C0STK5 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MADGAPRSPLHRSVSFKLLERWSGGPGPKEAASDTPGLRRRASCRPAASVPGQPSRRVSKLASG
PPAAPAQPRPLRSLSPSVRQLSRRFDAPRPDDDHAGARDGGVSPGAAEEAAEGAARGAWPSVTE
MRKLFGGPGSRRPSADSEASGTPSPDGAGWEPPAREPRQPPTPPPRTCFPLAGLRSARPLPGPG
TEGRRRRQQQQQQQQQERAQRPADGLHSWHSFSQPQAGAGARASCSCSSSIASSYPVSRGRAAS
SSEEEEEGPPPPPPGAQSPAYHGGHSSGSDEDRDGEGGHRWXGRPGPRPGSSLSDKNCRPDSYG
LNLGSMDSAGGARSPEPPKSPSEEGPPEWGTGSPPGVPGPQEGLRPMSDSGGAAFRVAKVSFPA
YLASPAGSRGSSRYSSTETLKDEDPWASRGSGGWGMYRSPSFGAGEGLLLRPQPRLRTKGAVGT
TRALRDGGLELDQSRQRKSLSNPDIASETLTLLSFLRSDLSELRVRKPSGRPSDLGSSPLDGRD
SPSAGGPGAQLGPVPAPAPASPGTRPTLKDLTATLRRAKSFTCSEKPMARRLCRTSTLKPSSSE
LLLAGPSAEEDPLPLVVQDQYVQEARQVFEKIQRMGAQQDDGSDVPPGSPDWAGDVTQGQRSQE
ELSGPESSLTDEGIGADPEPLVSAFCSLGTTGVWRPLSSSSAQTNHHGPGAEDSLGGWALVSPD
TPPTPGALRRRRKVPPSGPGGTELSNGEAGEAYRSLSDPIPQRHRAATSEEPSGFSVDSNLLGS
LSPKAGLPVAPAVDEGLTSGHSDWSVGSEESKGYQEVIQSIVQGPGALGRVVDDRVAGKAPKKK
SLSDPSRRGELAGPGFEGPGGEPIREVEPMLPPSSSEPILAERRAEPEEPSAARGRAQSERALP
KTRAASSTAHRDFHLDPKLADVLSPRLIRRGSKKRPARSSHQELQREEADEDQTSSLSRARPSS
KHVRHASVPATFTPIVVPEPPTSIGPPVAVPEPVGFPARAHSTLQAPSLEDVTKQYMLTLHSGE
VPAPVPVDMPCLTPVALPSAEAKPPETARAPDEPAQASKCCSKPQVDMRKHVTMTLLDTEQSYV
ESLRTLMQGYMQPLKQPENSLLCDPSLVDEIFDQIPELLEHHEQFLEQVRHCVQTWHAQQKVGD
LLVQSFSKDVLVNIYSAYIDNFLNAKDAVRVAKEARPAFLKFLEQSMRENKEKQALSDLMIKPV
QRIPRYELLVKDLLKHTPEDHPDHPLLLDAQRNIKQVAERINKGVRSAEEAERHARVLQEIEAH
IEGMEDLQAPLRRFLRQEMVIEVKAVGGKKDRSLFLFTDLIVCTTLKRKSGSLRRSSMSLYTAA
SVIDTASKYKLLWKLPLEDADIIKGASQATNRENIQKAINRLDEDLTTLGQMSKLSESLGFPHQ
SLDEALRDLSAAMHRDLSEKQALCYALSFPPTKLELCATRPEGTDSFIFEFPHPDARLGFEQAF
DEAKRKLASSKSCLDPEFLKAIPIMKTRSGMQFSCAAPTQSSCPEPMPEVWVCNSDGYVGQVCL
LSLRAEPDVEACIAVCSARILCIGAVPGLQRRGHREQPASLRNPPETAMETPGPELDVEATDEE
AATLAEPGPQPCLHISIAGSGLEMAPGPAGGDPRPELVPFDSDSDDESSPSPSGTLQSQASRST
ISSSFGNEETPSSKEATAETTSSEEEQEPGFLPLSGSFGPSGPCSTSPMDGRALRRSSHGSFTR
GSLEDLLSVDPEAYQSSVWLGTEDGCVHVYQSSDSIRDRRNSMKLQHAASVTCILYLNNQVFVS
LANGELVVYQREAGHFWDPQNFKSVTLGSQGSPITKMVSVGGRLWCGCQNRVLVLSPDTLQLEH
TFYVGQDSSRSVACMVDSSLGVWVTLKGSAHVCLYHPDTFEQLAEVDVTPPVHRMLAGSDAIIR
QHKAACLRITALLVCEELLWVGTSAGVVLTMPTSPSTVSCPRAPLSPAGLGQGHTGHVRFLAAV
QLPDGFNLLCPTPPPPPDTGPEKLPSLEHRDSPRNRGPASARPKMLVISGGDGYEDFRLSSGGG
GSSETVGRDDSTNHLLLWRV

hide sequence

Ensembl Acc Id:

ENSCAFP00000008390 ⟸ ENSCAFT00000009046

Ensembl Acc Id:

ENSCAFP00000042807 ⟸ ENSCAFT00000047227

RefSeq Acc Id:

XP_038361465 ⟸ XM_038505537

RefSeq Acc Id:

XP_038488811 ⟸ XM_038632883

RefSeq Acc Id:	XP_038286104 ⟸ XM_038430176
- UniProtKB:	A0A8I3RUM1 (UniProtKB/TrEMBL), A0A8C0STK5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038424638 ⟸ XM_038568710
- UniProtKB:	A0A8C0STK5 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCAFP00845011551 ⟸ ENSCAFT00845014901

Ensembl Acc Id:

ENSCAFP00845011823 ⟸ ENSCAFT00845015227

Ensembl Acc Id:

ENSCAFP00845011610 ⟸ ENSCAFT00845014973

Protein Domains

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000005619	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030013601	UniProtKB/TrEMBL
	ENSCAFG00040016253	UniProtKB/TrEMBL
	ENSCAFG00845008396	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000009046.5	UniProtKB/TrEMBL
	ENSCAFT00000047227.4	UniProtKB/TrEMBL
	ENSCAFT00030025535.1	UniProtKB/TrEMBL
	ENSCAFT00040029936.1	UniProtKB/TrEMBL
	ENSCAFT00040030189.1	UniProtKB/TrEMBL
	ENSCAFT00845014901.1	UniProtKB/TrEMBL
	ENSCAFT00845014973	ENTREZGENE
	ENSCAFT00845014973.1	UniProtKB/TrEMBL
	ENSCAFT00845015227.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.900.10	UniProtKB/TrEMBL
	2.130.10.10	UniProtKB/TrEMBL
	2.30.29.30	UniProtKB/TrEMBL
InterPro	ARHGEF10/ARHGEF17	UniProtKB/TrEMBL
	DBL_dom_sf	UniProtKB/TrEMBL
	DH-domain	UniProtKB/TrEMBL
	PH-like_dom_sf	UniProtKB/TrEMBL
	WD40/YVTN_repeat-like_dom_sf	UniProtKB/TrEMBL
	WD40_repeat_dom_sf	UniProtKB/TrEMBL
NCBI Gene	ARHGEF17	ENTREZGENE
PANTHER	PTHR12877	UniProtKB/TrEMBL
	PTHR12877:SF15	UniProtKB/TrEMBL
Pfam	PH_19	UniProtKB/TrEMBL
	RhoGEF	UniProtKB/TrEMBL
	WD40_2	UniProtKB/TrEMBL
PROSITE	DH_2	UniProtKB/TrEMBL
SMART	RhoGEF	UniProtKB/TrEMBL
Superfamily-SCOP	PH domain-like	UniProtKB/TrEMBL
	SSF48065	UniProtKB/TrEMBL
	SSF50978	UniProtKB/TrEMBL
UniProt	A0A8C0N6T2_CANLF	UniProtKB/TrEMBL
	A0A8C0STK5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3MZY2_CANLF	UniProtKB/TrEMBL
	A0A8I3N5U1_CANLF	UniProtKB/TrEMBL
	A0A8I3RUM1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0N887	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:38078	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message

Imported Disease Annotations - ClinVar