PIGZ (phosphatidylinositol glycan anchor biosynthesis class Z) - Rat Genome Database

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Gene: PIGZ (phosphatidylinositol glycan anchor biosynthesis class Z) Canis lupus familiaris
Analyze
Symbol: PIGZ
Name: phosphatidylinositol glycan anchor biosynthesis class Z
RGD ID: 12255333
Description: ENCODES a protein that exhibits alpha-1,2-mannosyltransferase activity (ortholog); mannosyltransferase activity (ortholog); INVOLVED IN GPI anchor biosynthetic process (inferred); ASSOCIATED WITH autistic disorder (ortholog); chromosome 3q29 microdeletion syndrome (ortholog); schizophrenia (ortholog); FOUND IN endoplasmic reticulum (inferred); endoplasmic reticulum membrane (inferred); membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: GPI mannosyltransferase 4
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13329,945,980 - 29,965,906 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3329,969,832 - 29,987,136 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03330,193,980 - 30,211,253 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.13329,988,325 - 30,005,607 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03330,024,217 - 30,043,112 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03330,646,533 - 30,663,810 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
PIGZ
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13329,945,980 - 29,965,906 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3329,969,832 - 29,987,136 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03330,193,980 - 30,211,253 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.13329,988,325 - 30,005,607 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03330,024,217 - 30,043,112 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03330,646,533 - 30,663,810 (-)NCBIUU_Cfam_GSD_1.0
PIGZ
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383196,946,356 - 196,968,833 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3196,946,356 - 196,969,060 (-)EnsemblGRCh38hg38GRCh38
GRCh373196,673,227 - 196,695,704 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 363198,157,611 - 198,180,101 (-)NCBINCBI36Build 36hg18NCBI36
Celera3195,259,832 - 195,282,326 (-)NCBICelera
Cytogenetic Map3q29NCBI
HuRef3193,973,362 - 193,995,816 (-)NCBIHuRef
CHM1_13196,644,550 - 196,666,991 (-)NCBICHM1_1
T2T-CHM13v2.03199,672,412 - 199,695,067 (-)NCBIT2T-CHM13v2.0
Pigz
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391631,745,797 - 31,764,866 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1631,752,669 - 31,764,864 (+)EnsemblGRCm39 Ensembl
GRCm381631,926,965 - 31,946,048 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1631,933,851 - 31,946,046 (+)EnsemblGRCm38mm10GRCm38
MGSCv371631,933,937 - 31,946,132 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361631,853,701 - 31,865,793 (+)NCBIMGSCv36mm8
Celera1632,427,718 - 32,439,857 (+)NCBICelera
Cytogenetic Map16B2NCBI
cM Map1622.4NCBI
Pigz
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81182,336,821 - 82,357,743 (-)NCBIGRCr8
mRatBN7.21168,831,847 - 68,851,798 (-)NCBImRatBN7.2mRatBN7.2
UTH_Rnor_SHR_Utx1177,668,905 - 77,688,856 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01170,331,513 - 70,345,298 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01169,357,988 - 69,377,946 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01172,930,040 - 72,936,002 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1172,931,297 - 72,934,823 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl1172,083,217 - 72,086,743 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01176,002,848 - 76,008,397 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41170,653,993 - 70,673,626 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11170,711,581 - 70,715,118 (-)NCBI
Celera1168,253,260 - 68,274,819 (-)NCBICelera
Cytogenetic Map11q22NCBI
Pigz
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495542012,994,892 - 13,003,170 (-)NCBIChiLan1.0ChiLan1.0
PIGZ
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22194,813,942 - 194,838,258 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13194,816,011 - 194,843,005 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03194,288,192 - 194,312,501 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13204,225,190 - 204,230,819 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3204,225,190 - 204,244,863 (-)Ensemblpanpan1.1panPan2
Pigz
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602143,019,285 - 143,035,787 (-)NCBIHiC_Itri_2
SpeTri2.0NW_004936833902,002 - 918,321 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PIGZ
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.113133,157,168 - 133,191,786 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213142,881,938 - 142,908,610 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PIGZ
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11590,284,834 - 90,303,871 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1590,297,389 - 90,303,863 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604164,060,377 - 64,080,245 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pigz
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473061,933,431 - 61,937,413 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473061,933,493 - 61,956,516 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in PIGZ
308 total Variants

Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005639612 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005639613 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005639615 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005639616 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005639617 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014110192 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014110193 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014110194 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014110195 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014110196 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022413760 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022413762 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022413763 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038445296 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038445297 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038445298 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038445299 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038445300 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038445301 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038445302 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038445303 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038445304 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038462348 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038519536 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038519537 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038519538 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038519539 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038519540 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038519541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038519542 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038519543 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038519544 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038583179 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038583180 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038583181 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038583182 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038583183 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038583184 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038583185 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038583186 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038583187 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038647587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038647588 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038647589 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038647590 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038647591 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038647592 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038647593 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038647594 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038647595 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_545157 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002622183 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005306452 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005306453 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005317165 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005317166 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005349512 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005349513 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005383431 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005383432 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005417109 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005417110 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000033 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000336 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000367 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000033 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XM_005639612   ⟹   XP_005639669
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.13329,947,276 - 29,965,905 (-)NCBI
Dog10K_Boxer_Tasha3329,971,132 - 29,985,385 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005639613   ⟹   XP_005639670
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.13329,947,276 - 29,956,806 (-)NCBI
Dog10K_Boxer_Tasha3329,971,132 - 29,979,872 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005639615   ⟹   XP_005639672
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.13329,947,276 - 29,965,906 (-)NCBI
Dog10K_Boxer_Tasha3329,971,132 - 29,985,385 (-)NCBI
Sequence:
RefSeq Acc Id: XM_014110192   ⟹   XP_013965667
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.13329,947,276 - 29,965,906 (-)NCBI
Dog10K_Boxer_Tasha3329,971,132 - 29,985,385 (-)NCBI
Sequence:
RefSeq Acc Id: XM_014110193   ⟹   XP_013965668
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.13329,947,276 - 29,965,905 (-)NCBI
Dog10K_Boxer_Tasha3329,971,132 - 29,985,378 (-)NCBI
Sequence:
RefSeq Acc Id: XM_014110194   ⟹   XP_013965669
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.13329,947,276 - 29,965,905 (-)NCBI
Dog10K_Boxer_Tasha3329,971,132 - 29,985,362 (-)NCBI
Sequence:
RefSeq Acc Id: XM_014110195   ⟹   XP_013965670
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.13329,947,276 - 29,965,906 (-)NCBI
Dog10K_Boxer_Tasha3329,971,132 - 29,985,371 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038445296   ⟹   XP_038301224
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03330,195,280 - 30,211,253 (-)NCBI
RefSeq Acc Id: XM_038445297   ⟹   XP_038301225
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03330,195,280 - 30,209,532 (-)NCBI
RefSeq Acc Id: XM_038445298   ⟹   XP_038301226
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03330,195,280 - 30,209,532 (-)NCBI
RefSeq Acc Id: XM_038445299   ⟹   XP_038301227
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03330,195,280 - 30,204,016 (-)NCBI
RefSeq Acc Id: XM_038445300   ⟹   XP_038301228
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03330,195,280 - 30,209,532 (-)NCBI
RefSeq Acc Id: XM_038445301   ⟹   XP_038301229
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03330,195,280 - 30,209,523 (-)NCBI
RefSeq Acc Id: XM_038445302   ⟹   XP_038301230
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03330,195,280 - 30,209,509 (-)NCBI
RefSeq Acc Id: XM_038445303   ⟹   XP_038301231
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03330,195,280 - 30,209,532 (-)NCBI
RefSeq Acc Id: XM_038445304   ⟹   XP_038301232
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03330,195,280 - 30,209,518 (-)NCBI
RefSeq Acc Id: XM_038462348   ⟹   XP_038318276
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha3329,971,132 - 29,987,136 (-)NCBI
RefSeq Acc Id: XM_038519536   ⟹   XP_038375464
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13329,989,624 - 30,005,607 (-)NCBI
RefSeq Acc Id: XM_038519537   ⟹   XP_038375465
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13329,989,624 - 30,003,872 (-)NCBI
RefSeq Acc Id: XM_038519538   ⟹   XP_038375466
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13329,989,624 - 30,003,872 (-)NCBI
RefSeq Acc Id: XM_038519539   ⟹   XP_038375467
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13329,989,624 - 29,998,357 (-)NCBI
RefSeq Acc Id: XM_038519540   ⟹   XP_038375468
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13329,989,624 - 30,003,872 (-)NCBI
RefSeq Acc Id: XM_038519541   ⟹   XP_038375469
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13329,989,624 - 30,003,865 (-)NCBI
RefSeq Acc Id: XM_038519542   ⟹   XP_038375470
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13329,989,624 - 30,003,849 (-)NCBI
RefSeq Acc Id: XM_038519543   ⟹   XP_038375471
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13329,989,624 - 30,003,872 (-)NCBI
RefSeq Acc Id: XM_038519544   ⟹   XP_038375472
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13329,989,624 - 30,003,858 (-)NCBI
RefSeq Acc Id: XM_038583179   ⟹   XP_038439107
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03330,647,820 - 30,663,810 (-)NCBI
RefSeq Acc Id: XM_038583180   ⟹   XP_038439108
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03330,647,820 - 30,662,075 (-)NCBI
RefSeq Acc Id: XM_038583181   ⟹   XP_038439109
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03330,647,820 - 30,662,075 (-)NCBI
RefSeq Acc Id: XM_038583182   ⟹   XP_038439110
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03330,647,820 - 30,656,561 (-)NCBI
RefSeq Acc Id: XM_038583183   ⟹   XP_038439111
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03330,647,820 - 30,662,075 (-)NCBI
RefSeq Acc Id: XM_038583184   ⟹   XP_038439112
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03330,647,820 - 30,662,066 (-)NCBI
RefSeq Acc Id: XM_038583185   ⟹   XP_038439113
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03330,647,820 - 30,662,052 (-)NCBI
RefSeq Acc Id: XM_038583186   ⟹   XP_038439114
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03330,647,820 - 30,662,075 (-)NCBI
RefSeq Acc Id: XM_038583187   ⟹   XP_038439115
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03330,647,820 - 30,662,061 (-)NCBI
RefSeq Acc Id: XM_038647587   ⟹   XP_038503515
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03330,025,517 - 30,043,112 (-)NCBI
RefSeq Acc Id: XM_038647588   ⟹   XP_038503516
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03330,025,517 - 30,041,370 (-)NCBI
RefSeq Acc Id: XM_038647589   ⟹   XP_038503517
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03330,025,517 - 30,041,370 (-)NCBI
RefSeq Acc Id: XM_038647590   ⟹   XP_038503518
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03330,025,517 - 30,041,370 (-)NCBI
RefSeq Acc Id: XM_038647591   ⟹   XP_038503519
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03330,025,517 - 30,036,453 (-)NCBI
RefSeq Acc Id: XM_038647592   ⟹   XP_038503520
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03330,025,517 - 30,041,363 (-)NCBI
RefSeq Acc Id: XM_038647593   ⟹   XP_038503521
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03330,025,517 - 30,041,347 (-)NCBI
RefSeq Acc Id: XM_038647594   ⟹   XP_038503522
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03330,025,517 - 30,041,370 (-)NCBI
RefSeq Acc Id: XM_038647595   ⟹   XP_038503523
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03330,025,517 - 30,041,356 (-)NCBI
RefSeq Acc Id: XM_545157   ⟹   XP_545157
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.13329,947,276 - 29,965,905 (-)NCBI
Dog10K_Boxer_Tasha3329,971,132 - 29,985,385 (-)NCBI
Sequence:
RefSeq Acc Id: XR_005306452
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03330,193,980 - 30,211,253 (-)NCBI
RefSeq Acc Id: XR_005306453
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03330,195,090 - 30,211,188 (-)NCBI
RefSeq Acc Id: XR_005317165
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha3329,969,832 - 29,987,136 (-)NCBI
RefSeq Acc Id: XR_005317166
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha3329,970,942 - 29,987,071 (-)NCBI
RefSeq Acc Id: XR_005349512
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13329,988,325 - 30,005,607 (-)NCBI
RefSeq Acc Id: XR_005349513
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13329,989,434 - 30,005,542 (-)NCBI
RefSeq Acc Id: XR_005383431
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03330,646,533 - 30,663,810 (-)NCBI
RefSeq Acc Id: XR_005383432
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03330,647,630 - 30,663,745 (-)NCBI
RefSeq Acc Id: XR_005417109
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03330,024,217 - 30,043,112 (-)NCBI
RefSeq Acc Id: XR_005417110
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03330,025,327 - 30,043,048 (-)NCBI
Protein Sequences
Protein RefSeqs XP_005639669 (Get FASTA)   NCBI Sequence Viewer  
  XP_005639670 (Get FASTA)   NCBI Sequence Viewer  
  XP_005639672 (Get FASTA)   NCBI Sequence Viewer  
  XP_013965667 (Get FASTA)   NCBI Sequence Viewer  
  XP_013965668 (Get FASTA)   NCBI Sequence Viewer  
  XP_013965669 (Get FASTA)   NCBI Sequence Viewer  
  XP_013965670 (Get FASTA)   NCBI Sequence Viewer  
  XP_038301224 (Get FASTA)   NCBI Sequence Viewer  
  XP_038301225 (Get FASTA)   NCBI Sequence Viewer  
  XP_038301226 (Get FASTA)   NCBI Sequence Viewer  
  XP_038301227 (Get FASTA)   NCBI Sequence Viewer  
  XP_038301228 (Get FASTA)   NCBI Sequence Viewer  
  XP_038301229 (Get FASTA)   NCBI Sequence Viewer  
  XP_038301230 (Get FASTA)   NCBI Sequence Viewer  
  XP_038301231 (Get FASTA)   NCBI Sequence Viewer  
  XP_038301232 (Get FASTA)   NCBI Sequence Viewer  
  XP_038318276 (Get FASTA)   NCBI Sequence Viewer  
  XP_038375464 (Get FASTA)   NCBI Sequence Viewer  
  XP_038375465 (Get FASTA)   NCBI Sequence Viewer  
  XP_038375466 (Get FASTA)   NCBI Sequence Viewer  
  XP_038375467 (Get FASTA)   NCBI Sequence Viewer  
  XP_038375468 (Get FASTA)   NCBI Sequence Viewer  
  XP_038375469 (Get FASTA)   NCBI Sequence Viewer  
  XP_038375470 (Get FASTA)   NCBI Sequence Viewer  
  XP_038375471 (Get FASTA)   NCBI Sequence Viewer  
  XP_038375472 (Get FASTA)   NCBI Sequence Viewer  
  XP_038439107 (Get FASTA)   NCBI Sequence Viewer  
  XP_038439108 (Get FASTA)   NCBI Sequence Viewer  
  XP_038439109 (Get FASTA)   NCBI Sequence Viewer  
  XP_038439110 (Get FASTA)   NCBI Sequence Viewer  
  XP_038439111 (Get FASTA)   NCBI Sequence Viewer  
  XP_038439112 (Get FASTA)   NCBI Sequence Viewer  
  XP_038439113 (Get FASTA)   NCBI Sequence Viewer  
  XP_038439114 (Get FASTA)   NCBI Sequence Viewer  
  XP_038439115 (Get FASTA)   NCBI Sequence Viewer  
  XP_038503515 (Get FASTA)   NCBI Sequence Viewer  
  XP_038503516 (Get FASTA)   NCBI Sequence Viewer  
  XP_038503517 (Get FASTA)   NCBI Sequence Viewer  
  XP_038503518 (Get FASTA)   NCBI Sequence Viewer  
  XP_038503519 (Get FASTA)   NCBI Sequence Viewer  
  XP_038503520 (Get FASTA)   NCBI Sequence Viewer  
  XP_038503521 (Get FASTA)   NCBI Sequence Viewer  
  XP_038503522 (Get FASTA)   NCBI Sequence Viewer  
  XP_038503523 (Get FASTA)   NCBI Sequence Viewer  
  XP_545157 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000019309.5
  ENSCAFP00000068330.1
  ENSCAFP00030033995.1
  ENSCAFP00040041812.1
  ENSCAFP00845042358.1
  ENSCAFP00845042366
  ENSCAFP00845042366.1
RefSeq Acc Id: XP_013965668   ⟸   XM_014110193
- Peptide Label: isoform X2
- UniProtKB: A0A8C0PAT4 (UniProtKB/TrEMBL),   A0A8P0PH96 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013965670   ⟸   XM_014110195
- Peptide Label: isoform X2
- UniProtKB: A0A8C0PAT4 (UniProtKB/TrEMBL),   A0A8P0PH96 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013965669   ⟸   XM_014110194
- Peptide Label: isoform X2
- UniProtKB: A0A8C0PAT4 (UniProtKB/TrEMBL),   A0A8P0PH96 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_545157   ⟸   XM_545157
- Peptide Label: isoform X2
- UniProtKB: A0A8C0PAT4 (UniProtKB/TrEMBL),   A0A8P0PH96 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005639672   ⟸   XM_005639615
- Peptide Label: isoform X2
- UniProtKB: A0A8C0PAT4 (UniProtKB/TrEMBL),   A0A8P0PH96 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005639669   ⟸   XM_005639612
- Peptide Label: isoform X2
- UniProtKB: A0A8C0PAT4 (UniProtKB/TrEMBL),   A0A8P0PH96 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013965667   ⟸   XM_014110192
- Peptide Label: isoform X2
- UniProtKB: A0A8C0PAT4 (UniProtKB/TrEMBL),   A0A8P0PH96 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005639670   ⟸   XM_005639613
- Peptide Label: isoform X2
- UniProtKB: A0A8C0PAT4 (UniProtKB/TrEMBL),   A0A8P0PH96 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_038375464   ⟸   XM_038519536
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038375468   ⟸   XM_038519540
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038375471   ⟸   XM_038519543
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038375465   ⟸   XM_038519537
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038375466   ⟸   XM_038519538
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038375469   ⟸   XM_038519541
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038375472   ⟸   XM_038519544
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038375470   ⟸   XM_038519542
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038375467   ⟸   XM_038519539
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038503515   ⟸   XM_038647587
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038503518   ⟸   XM_038647590
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038503522   ⟸   XM_038647594
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038503516   ⟸   XM_038647588
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038503517   ⟸   XM_038647589
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038503520   ⟸   XM_038647592
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038503523   ⟸   XM_038647595
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038503521   ⟸   XM_038647593
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038503519   ⟸   XM_038647591
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038301224   ⟸   XM_038445296
- Peptide Label: isoform X1
- UniProtKB: A0A8I3QN33 (UniProtKB/TrEMBL),   A0A8P0PH96 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038301228   ⟸   XM_038445300
- Peptide Label: isoform X2
- UniProtKB: A0A8C0JRU4 (UniProtKB/TrEMBL),   A0A8C0TXN3 (UniProtKB/TrEMBL),   A0A8P0PH96 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038301231   ⟸   XM_038445303
- Peptide Label: isoform X2
- UniProtKB: A0A8C0JRU4 (UniProtKB/TrEMBL),   A0A8C0TXN3 (UniProtKB/TrEMBL),   A0A8P0PH96 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038301225   ⟸   XM_038445297
- Peptide Label: isoform X2
- UniProtKB: A0A8C0JRU4 (UniProtKB/TrEMBL),   A0A8C0TXN3 (UniProtKB/TrEMBL),   A0A8P0PH96 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038301226   ⟸   XM_038445298
- Peptide Label: isoform X2
- UniProtKB: A0A8C0JRU4 (UniProtKB/TrEMBL),   A0A8C0TXN3 (UniProtKB/TrEMBL),   A0A8P0PH96 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038301229   ⟸   XM_038445301
- Peptide Label: isoform X2
- UniProtKB: A0A8C0JRU4 (UniProtKB/TrEMBL),   A0A8C0TXN3 (UniProtKB/TrEMBL),   A0A8P0PH96 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038301232   ⟸   XM_038445304
- Peptide Label: isoform X2
- UniProtKB: A0A8C0JRU4 (UniProtKB/TrEMBL),   A0A8C0TXN3 (UniProtKB/TrEMBL),   A0A8P0PH96 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038301230   ⟸   XM_038445302
- Peptide Label: isoform X2
- UniProtKB: A0A8C0JRU4 (UniProtKB/TrEMBL),   A0A8C0TXN3 (UniProtKB/TrEMBL),   A0A8P0PH96 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038301227   ⟸   XM_038445299
- Peptide Label: isoform X2
- UniProtKB: A0A8C0JRU4 (UniProtKB/TrEMBL),   A0A8C0TXN3 (UniProtKB/TrEMBL),   A0A8P0PH96 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038318276   ⟸   XM_038462348
- Peptide Label: isoform X1
- UniProtKB: A0A8P0SHY9 (UniProtKB/TrEMBL),   A0A8P0PH96 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038439107   ⟸   XM_038583179
- Peptide Label: isoform X1
- UniProtKB: A0A8I3QN33 (UniProtKB/TrEMBL),   A0A8P0PH96 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038439111   ⟸   XM_038583183
- Peptide Label: isoform X2
- UniProtKB: A0A8C0JRU4 (UniProtKB/TrEMBL),   A0A8C0TXN3 (UniProtKB/TrEMBL),   A0A8P0PH96 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038439114   ⟸   XM_038583186
- Peptide Label: isoform X2
- UniProtKB: A0A8C0JRU4 (UniProtKB/TrEMBL),   A0A8C0TXN3 (UniProtKB/TrEMBL),   A0A8P0PH96 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038439108   ⟸   XM_038583180
- Peptide Label: isoform X2
- UniProtKB: A0A8C0JRU4 (UniProtKB/TrEMBL),   A0A8C0TXN3 (UniProtKB/TrEMBL),   A0A8P0PH96 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038439109   ⟸   XM_038583181
- Peptide Label: isoform X2
- UniProtKB: A0A8C0JRU4 (UniProtKB/TrEMBL),   A0A8C0TXN3 (UniProtKB/TrEMBL),   A0A8P0PH96 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038439112   ⟸   XM_038583184
- Peptide Label: isoform X2
- UniProtKB: A0A8C0JRU4 (UniProtKB/TrEMBL),   A0A8C0TXN3 (UniProtKB/TrEMBL),   A0A8P0PH96 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038439115   ⟸   XM_038583187
- Peptide Label: isoform X2
- UniProtKB: A0A8C0JRU4 (UniProtKB/TrEMBL),   A0A8C0TXN3 (UniProtKB/TrEMBL),   A0A8P0PH96 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038439113   ⟸   XM_038583185
- Peptide Label: isoform X2
- UniProtKB: A0A8C0JRU4 (UniProtKB/TrEMBL),   A0A8C0TXN3 (UniProtKB/TrEMBL),   A0A8P0PH96 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038439110   ⟸   XM_038583182
- Peptide Label: isoform X2
- UniProtKB: A0A8C0JRU4 (UniProtKB/TrEMBL),   A0A8C0TXN3 (UniProtKB/TrEMBL),   A0A8P0PH96 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000013100 UniProtKB/TrEMBL
  ENSCAFG00030021218 UniProtKB/TrEMBL
  ENSCAFG00040025657 UniProtKB/TrEMBL
  ENSCAFG00845030381 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000020797.5 UniProtKB/TrEMBL
  ENSCAFT00000102424.1 UniProtKB/TrEMBL
  ENSCAFT00030038975.1 UniProtKB/TrEMBL
  ENSCAFT00040047893.1 UniProtKB/TrEMBL
  ENSCAFT00845053900.1 UniProtKB/TrEMBL
  ENSCAFT00845053912 ENTREZGENE
  ENSCAFT00845053912.1 UniProtKB/TrEMBL
InterPro GPI_mannosylTrfase UniProtKB/TrEMBL
KEGG Report cfa:488034 UniProtKB/TrEMBL
NCBI Gene PIGZ ENTREZGENE
PANTHER GPI MANNOSYLTRANSFERASE 4 UniProtKB/TrEMBL
  PTHR22760 UniProtKB/TrEMBL
Pfam Glyco_transf_22 UniProtKB/TrEMBL
UniProt A0A8C0JRU4 ENTREZGENE
  A0A8C0PAT4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0TXN3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3QBC4_CANLF UniProtKB/TrEMBL
  A0A8I3QN33 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0PH96 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0SHY9 ENTREZGENE, UniProtKB/TrEMBL