LOC100688853 (phospholipid scramblase 1-like)

Gene: LOC100688853 (phospholipid scramblase 1-like) Canis lupus familiaris

Analyze

Symbol:

LOC100688853 (Ensembl: PLSCR1)

Name:

phospholipid scramblase 1-like

RGD ID:

12232101

Description:

ENCODES a protein that exhibits phospholipid scramblase activity (inferred); INVOLVED IN plasma membrane phospholipid scrambling (inferred); FOUND IN plasma membrane (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

LOC106557614; LOC106557615; uncharacterized LOC106557614; uncharacterized LOC106557615

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	23	41,591,425 - 41,625,918 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	23	41,599,843 - 41,669,112 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	23	41,450,324 - 41,484,766 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	23	42,209,660 - 42,244,126 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	23	42,218,030 - 42,244,250 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	23	41,797,739 - 41,832,175 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	23	41,872,694 - 41,907,153 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	23	42,116,197 - 42,150,665 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

plasma membrane phospholipid scrambling (IEA)

Cellular Component

plasma membrane (IEA)

Molecular Function

phospholipid scramblase activity (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Variants

Variants in LOC100688853
510 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium	5		11						6		10
Low			11	6	6	6	6		6			6
Below cutoff		5						6		8

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_014106533	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022408724	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022408726	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038432598	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038432599	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038432600	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038432601	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038432602	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038507898	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038507899	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038507900	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038507901	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038507902	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038571137	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038571138	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038571139	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038571140	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038571141	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038635330	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038635331	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038635332	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038635333	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038635334	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002618299	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002618300	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002618301	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002618302	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002618303	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002618304	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002618305	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005300281	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005300282	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005300283	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005313876	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005343376	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005343377	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005343378	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005377159	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005377160	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005377161	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005411093	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005411094	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005411095	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000023	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000259	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000062	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000059	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000023	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00845037219 ⟹ ENSCAFP00845029148

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	23	42,218,030 - 42,244,250 (-)	Ensembl

RefSeq Acc Id:

XM_014106533 ⟹ XP_013962008

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	23	41,599,769 - 41,625,918 (-)	NCBI
Dog10K_Boxer_Tasha	23	41,458,622 - 41,484,766 (-)	NCBI

Sequence:

show sequence

TGTTTCTTTGTCGTGGCTGCTTGGGTATCCTAACTCTTCGTCACAACAACTTTGAGAGGCTGTG
GATGTGGGCCAGATAGAGGATCAAGCCTCTCCTAATTCACCTCCCAGATTTTACAGATAAAAAA
AGAAATCTCTTCAATCTGTCACATTCTTGTGAATTTATGTAATCTTGATTGCTTGATTGATGGC
TTTTTCTAATCTCCAACCCACCATACATGGGATGAGAGCACCAGGGACAATACCCAACTGTCCA
CCTGGACTGGAATATTTGACTCAGATAAATCAGTTACTAGTGTGTCAACGTTTTGATCTTCTGG
AAGTTCTCGGTTGTTTTGAAACTAGTAAGAAATATGAAGTCATGAACAGCCAAGGACAGAGAAT
TTATTTTGCCGAAGACAGAAGTAATTGTTTCCTCAGATACCTCTGTGGACCTTCAAGATCTTTT
ACCATTACAATTTATGATAACATAGGCCGTGATGTCATAACTGTGCATAAAGCTCTAAGATGTA
GCTGTTGCTGGAGAAACTGCTACCTACAAAAGCTAAAAGTTGAGGCTCCTCCTGGTGAAAAAAT
TGGATATGTGTACCAATACTTTCACCCATTGTGGCCAATGTTTAAAATTAAAAATGCAAATAAG
GAGGATATAATGAAAATCAGAGGACCATGTGTGGTTTCCAGCTGTCTCACGGATCTAAATTTTA
ATTTATTGTCTCTGGATGAAGAAATAGTTATTGGTAAGATTTCAAATACATGGGCTGGATTTAT
TAGGGAACTATCTACCAATGCTGATAAATTTGGAATCCAGTTTCCACTTGATCTTGATGTTAAG
ATAAAAGCACTGATGCTTGGAGCAAGTTTCCTCATTGACTACATGTACTTTGAACTCTGGTCAT
GAGTTTCACCAGCTTTCAGCAAAATTAAACAACTTTCACTGAGAATATTTAAATGAAGTTTTAT
TTCACTAAAATTATTTGTATAATTTTTTCTGAATAAACCACACCAAAATTTA

hide sequence

RefSeq Acc Id:

XM_022408724 ⟹ XP_022264432

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	23	41,591,505 - 41,625,918 (-)	NCBI
Dog10K_Boxer_Tasha	23	41,450,352 - 41,484,766 (-)	NCBI

Sequence:

show sequence

TGTTTCTTTGTCGTGGCTGCTTGGGTATCCTAACTCTTCGTCACAACAACTTTGAGAGGCTGTG
GATGTGGGCCAGATAGAGGATCAAGCCTCTCCTAATTCACCTCCCAGATTTTACAGATAAAAAA
AGAAATCTCTTCAATCTGTCACATTCTTGTGAATTTATGTAATCTTGATTGCTTGATTGATGGC
TTTTTCTAATCTCCAACCCACCATACATGGGATGAGAGCACCAGGGACAATACCCAACTGTCCA
CCTGGACTGGAATATTTGACTCAGATAAATCAGTTACTAGTGTGTCAACGTTTTGATCTTCTGG
AAGTTCTCGGTTGTTTTGAAACTAGTAAGAAATATGAAGTCATGAACAGCCAAGGACAGAGAAT
TTATTTTGCCGAAGACAGAAGTAATTGTTTCCTCAGATACCTCTGTGGACCTTCAAGATCTTTT
ACCATTACAATTTATGATAACATAGGCCGTGATGTCATAACTGTGCATAAAGCTCTAAGATGTA
GCTGTTGCTGGAGAAACTGCTACCTACAAAAGCTAAAAGTTGAGGCTCCTCCTGGTGAAAAAAT
TGGATATGTGTACCAATACTTTCACCCATTGTGGCCAATGTTTAAAATTAAAAATGCAAATAAG
GAGGATATAATGAAAATCAGAGGACCATGTGTGGTTTCCAGCTGTCTCACGGATCTAAATTTTA
ATTTATTGTCTCTGGATGAAGAAATAGTTATTGTTCCTTCTGTGAAACTTATCTGTCTACAGCC
CCTGGAAGACACACCTACTTTTCTCTCTCCATCCAGATCTGATTGGATTAGGCTTTGACATCAC
TGGGACAAGAATCAAGATCAGAATCAGCAGTGTTCTGCTGATAGATGTCAAATCATCAGCTTTC
CATGGAAATAAAAGGCCTTGGTTTACAGTGATTGAAGATTACCTTGGTGAACATATTCCCACAA
CAGCTGATTTCAATCTATCAATATGATGTCACTGAATGCAGAGATGGGAAGAGATGCTCACAAT
TGTCTCTTGTTAGCCTATGCAAGCTGGCTCCCACATACCATTGTTCTGACCTAAAAAAATAATA
AGTTGGGAATTGTTCCATCATGCTTTATACTCTGAAGTAATTGGTATAATATTGGTATTTCTAG
GTCTGCCTTAAATTTTTGTTAGTGATAACAAGGTTTTGAGTAATTCATTTGATCTTATGACTCC
TGAAATATATATTTTTTTCCTTTTTCTTAATGTAAAAAAATGCTCTTTTCTACAAGAAGCATAT
CCTCAGTTGCACTGTGTCTTTGAAAAGAAGCTCATATTTAGTATATAAATACCATATTGCCATA
TTCCAGGAAAAAGAAAA

hide sequence

RefSeq Acc Id:

XM_022408726 ⟹ XP_022264434

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	23	41,591,510 - 41,625,918 (-)	NCBI
Dog10K_Boxer_Tasha	23	41,450,357 - 41,484,766 (-)	NCBI

Sequence:

show sequence

TGTTTCTTTGTCGTGGCTGCTTGGGTATCCTAACTCTTCGTCACAACAACTTTGAGAGGCTGTG
GATGTGGGCCAGATAGAGGATCAAGCCTCTCCTAATTCACCTCCCAGATTTTACAGATAAAAAA
AGAAATCTCTTCAATCTGTCACATTCTTGTGAATTTATGTAATCTTGATTGCTTGATTGATGGC
TTTTTCTAATCTCCAACCCACCATACATGGGATGAGAGCACCAGGGACAATACCCAACTGTCCA
CCTGGACTGGAATATTTGACTCAGATAAATCAGTTACTAGTGTGTCAACGTTTTGATCTTCTGG
AAGTTCTCGGTTGTTTTGAAACTAGTAAGAAATATGAAGTCATGAACAGCCAAGGACAGAGAAT
TTATTTTGCCGAAGACAGAAGTAATTGTTTCCTCAGATACCTCTGTGGACCTTCAAGATCTTTT
ACCATTACAATTTATGATAACATAGGCCGTGATGTCATAACTGTGCATAAAGCTCTAAGATGTA
GCTGTTGCTGGAGAAACTGCTACCTACAAAAGCTAAAAGTTGAGGCTCCTCCTGGTGAAAAAAT
TGGATATGTGTACCAATACTTTCACCCATTGTGGCCAATGTTTAAAATTAAAAATGCAAATAAG
GAGGATATAATGAAAATCAGAGGACCATGTGTGGTTTCCAGCTGTCTCACGGATCTAAATTTTA
ATAATCAAGATCAGAATCAGCAGTGTTCTGCTGATAGATGTCAAATCATCAGCTTTCCATGGAA
ATAAAAGGCCTTGGTTTACAGTGATTGAAGATTACCTTGGTGAACATATTCCCACAACAGCTGA
TTTCAATCTATCAATATGATGTCACTGAATGCAGAGATGGGAAGAGATGCTCACAATTGTCTCT
TGTTAGCCTATGCAAGCTGGCTCCCACATACCATTGTTCTGACCTAAAAAAATAATAAGTTGGG
AATTGTTCCATCATGCTTTATACTCTGAAGTAATTGGTATAATATTGGTATTTCTAGGTCTGCC
TTAAATTTTTGTTAGTGATAACAAGGTTTTGAGTAATTCATTTGATCTTATGACTCCTGAAATA
TATATTTTTTTCCTTTTTCTTAATGTAAAAAAATGCTCTTTTCTACAAGAAGCATATCCTCAGT
TGCACTGTGTCTTTGAAAAGAAGCTCATATTTAGTATATAAATACCATATTGCCATATTCCAGG
AAAAA

hide sequence

RefSeq Acc Id:

XM_038432598 ⟹ XP_038288526

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	23	42,217,956 - 42,244,126 (-)	NCBI

RefSeq Acc Id:

XM_038432599 ⟹ XP_038288527

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	23	42,217,956 - 42,243,379 (-)	NCBI

RefSeq Acc Id:

XM_038432600 ⟹ XP_038288528

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	23	42,217,956 - 42,244,107 (-)	NCBI

RefSeq Acc Id:

XM_038432601 ⟹ XP_038288529

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	23	42,209,687 - 42,244,126 (-)	NCBI

RefSeq Acc Id:

XM_038432602 ⟹ XP_038288530

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	23	42,209,691 - 42,244,126 (-)	NCBI

RefSeq Acc Id:

XM_038507898 ⟹ XP_038363826

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	23	41,806,028 - 41,832,175 (-)	NCBI

RefSeq Acc Id:

XM_038507899 ⟹ XP_038363827

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	23	41,806,028 - 41,831,428 (-)	NCBI

RefSeq Acc Id:

XM_038507900 ⟹ XP_038363828

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	23	41,806,028 - 41,832,156 (-)	NCBI

RefSeq Acc Id:

XM_038507901 ⟹ XP_038363829

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	23	41,797,767 - 41,832,175 (-)	NCBI

RefSeq Acc Id:

XM_038507902 ⟹ XP_038363830

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	23	41,797,771 - 41,832,175 (-)	NCBI

RefSeq Acc Id:

XM_038571137 ⟹ XP_038427065

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	23	42,124,488 - 42,150,665 (-)	NCBI

RefSeq Acc Id:

XM_038571138 ⟹ XP_038427066

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	23	42,124,488 - 42,149,918 (-)	NCBI

RefSeq Acc Id:

XM_038571139 ⟹ XP_038427067

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	23	42,124,488 - 42,150,646 (-)	NCBI

RefSeq Acc Id:

XM_038571140 ⟹ XP_038427068

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	23	42,116,225 - 42,150,665 (-)	NCBI

RefSeq Acc Id:

XM_038571141 ⟹ XP_038427069

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	23	42,116,229 - 42,150,665 (-)	NCBI

RefSeq Acc Id:

XM_038635330 ⟹ XP_038491258

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	23	41,880,994 - 41,907,153 (-)	NCBI

RefSeq Acc Id:

XM_038635331 ⟹ XP_038491259

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	23	41,880,994 - 41,906,406 (-)	NCBI

RefSeq Acc Id:

XM_038635332 ⟹ XP_038491260

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	23	41,880,994 - 41,907,134 (-)	NCBI

RefSeq Acc Id:

XM_038635333 ⟹ XP_038491261

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	23	41,872,720 - 41,907,153 (-)	NCBI

RefSeq Acc Id:

XM_038635334 ⟹ XP_038491262

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	23	41,872,724 - 41,907,153 (-)	NCBI

RefSeq Acc Id:

XR_002618299

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	23	41,591,508 - 41,625,918 (-)	NCBI
Dog10K_Boxer_Tasha	23	41,450,355 - 41,484,766 (-)	NCBI

Sequence:

show sequence

TGTTTCTTTGTCGTGGCTGCTTGGGTATCCTAACTCTTCGTCACAACAACTTTGAGAGGCTGTG
GATGTGGGCCAGATAGAGGATCAAGCCTCTCCTAATTCACCTCCCAGATTTTACAGATAAAAAA
AGAAATCTCTTCAATCTGTCACATTCTTGTGAATTTATGTAATCTTGATTGCTTGATTGATGGC
TTTTTCTAATCTCCAACCCACCATACATGGGATGAGAGCACCAGGGACAATACCCAACTGTCCA
CCTGGACTGGAATATTTGACTCAGATAAATCAGTTACTAGTGTGTCAACGTTTTGATCTTCTGG
AAGTTCTCGGTTGTTTTGAAACTAGTAAGAAATATGAAGTCATGAACAGCCAAGGACAGAGAAT
TTATTTTGCCGAAGACAGAAGTAATTGTTTCCTCAGATACCTCTGTGGACCTTCAAGATCTTTT
ACCATTACAATTTATGATAACATAGGCCGTGATGTCATAACTGTGCATAAAGCTCTAAGATGTA
GCTGTTGCTGGAGAAACTGCTACCTACAAAAGCTAAAAGTTGAGGCTCCTCCTGGTGAAAAAAT
TGGATATGTGTACCAATACTTTCACCCATTGTGGCCAATGTTTAAAATTAAAAATGCAAATAAG
GAGGATATAATGAAAATCAGAGGACCATGTGTGGTTTCCAGCTGTCTCACGGATCTAAATTTTA
ATTTATTGTCTCTGGATGAAGAAATAGTTATTGGTAAGATTTCAAATACATGGGCTGGATTTAT
TAGGGAACTATCTACCAATGCTGATAAATTTGGAATCCAGTTTCCACTTGATCTTGATGTTAAG
ATAAAAGCACTGATGCTTGGAGCAAGTTTCCTCATTCCTCTTGGGACTCCCAAAGGTCTCTTTC
AATTATGGCATCAGACTTAAGTCCAGTATCACATGATCTGCATCTTCTGTGAATCCAGTTCCTT
CTGTGAAACTTATCTGTCTACAGCCCCTGGAAGACACACCTACTTTTCTCTCTCCATCCAGATC
TGATTGGATTAGGCTTTGACATCACTGGGACAAGAATCAAGATCAGAATCAGCAGTGTTCTGCT
GATAGATGTCAAATCATCAGCTTTCCATGGAAATAAAAGGCCTTGGTTTACAGTGATTGAAGAT
TACCTTGGTGAACATATTCCCACAACAGCTGATTTCAATCTATCAATATGATGTCACTGAATGC
AGAGATGGGAAGAGATGCTCACAATTGTCTCTTGTTAGCCTATGCAAGCTGGCTCCCACATACC
ATTGTTCTGACCTAAAAAAATAATAAGTTGGGAATTGTTCCATCATGCTTTATACTCTGAAGTA
ATTGGTATAATATTGGTATTTCTAGGTCTGCCTTAAATTTTTGTTAGTGATAACAAGGTTTTGA
GTAATTCATTTGATCTTATGACTCCTGAAATATATATTTTTTTCCTTTTTCTTAATGTAAAAAA
ATGCTCTTTTCTACAAGAAGCATATCCTCAGTTGCACTGTGTCTTTGAAAAGAAGCTCATATTT
AGTATATAAATACCATATTGCCATATTCCAGGAAAAAGA

hide sequence

RefSeq Acc Id:

XR_002618300

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	23	41,591,443 - 41,625,918 (-)	NCBI
Dog10K_Boxer_Tasha	23	41,450,335 - 41,484,766 (-)	NCBI

Sequence:

show sequence

TGTTTCTTTGTCGTGGCTGCTTGGGTATCCTAACTCTTCGTCACAACAACTTTGAGAGGCTGTG
GATGTGGGCCAGATAGAGGATCAAGCCTCTCCTAATTCACCTCCCAGATTTTACAGATAAAAAA
AGAAATCTCTTCAATCTGTCACATTCTTGTGAATTTATGTAATCTTGATTGCTTGATTGATGGC
TTTTTCTAATCTCCAACCCACCATACATGGGATGAGAGCACCAGGGACAATACCCAACTGTCCA
CCTGGACTGGAATATTTGACTCAGATAAATCAGTTACTAGTGTGTCAACGTTTTGATCTTCTGG
AAGTTCTCGGTTGTTTTGAAACTAGTAAGAAATATGAAGTCATGAACAGCCAAGGACAGAGAAT
TTATTTTGCCGAAGACAGAAGTAATTGTTTCCTCAGATACCTCTGTGGACCTTCAAGATCTTTT
ACCATTACAATTTATGATAACATAGGCCGTGATGTCATAACTGTGCATAAAGCTCTAAGATGTA
GCTGTTGCTGGAGAAACTGCTACCTACAAAAGCTAAAAGTTGAGGCTCCTCCTGGTGAAAAAAT
TGGATATGTGTACCAATACTTTCACCCATTGTGGCCAATGTTTAAAATTAAAAATGCAAATAAG
GAGGATATAATGAAAATCAGAGGACCATGTGTGGTTTCCAGCTGTCTCACGGATCTAAATTTTA
ATTTATTGTCTCTGGATGAAGAAATAGTTATTGGTAAGATTTCAAATACATGGGCTGGATTTAT
TAGGGAACTATCTACCAATGCTGATAAATTTGGAATCCAGTTTCCACTTGATCTTGATGTTAAG
ATAAAAGCACTGATGCTTGGAGCAAGTTTCCTCATTCCTCTTGGGACTCCCAAAGGTCTCTTTC
AATTATGGCATCAGACTTAAGTCCAGTATCACATGATCTGCATCTTCTGTGAATCCAGTTCCTT
CTGTGAAACTTATCTGTCTACAGCCCCTGGAAGACACACCTACTTTTCTCTCTCCATCCAGATC
TGATTGGATTAGGCTTTGACATCACTGGGACAAGATGAGTGCTGCCATTTTTGGGAAACCCCAG
TGCTCCTGGCTGTTATGCTTCTGGACATCCACTACAATAGTGGTCCTCAAACTTTAGCATGCAT
CAAAATCATCTGGAGGGATTATTACAACTCAGACCACTGCACCCCAGCCACAAAGTATCTGATT
CTAATCAAGATCAGAATCAGCAGTGTTCTGCTGATAGATGTCAAATCATCAGCTTTCCATGGAA
ATAAAAGGCCTTGGTTTACAGTGATTGAAGATTACCTTGGTGAACATATTCCCACAACAGCTGA
TTTCAATCTATCAATATGATGTCACTGAATGCAGAGATGGGAAGAGATGCTCACAATTGTCTCT
TGTTAGCCTATGCAAGCTGGCTCCCACATACCATTGTTCTGACCTAAAAAAATAATAAGTTGGG
AATTGTTCCATCATGCTTTATACTCTGAAGTAATTGGTATAATATTGGTATTTCTAGGTCTGCC
TTAAATTTTTGTTAGTGATAACAAGGTTTTGAGTAATTCATTTGATCTTATGACTCCTGAAATA
TATATTTTTTTCCTTTTTCTTAATGTAAAAAAATGCTCTTTTCTACAAGAAGCATATCCTCAGT
TGCACTGTGTCTTTGAAAAGAAGCTCATATTTAGTATATAAATACCATATTGCCATATTCCAGG
AAAAAGAAAATAAAATGAAGAAAAAGCAAAAAAGAAACTTTATAAGCCTACTACCTGACAAGTA
CATCTGTT

hide sequence

RefSeq Acc Id:

XR_002618301

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	23	41,591,503 - 41,625,171 (-)	NCBI
Dog10K_Boxer_Tasha	23	41,450,351 - 41,484,019 (-)	NCBI

Sequence:

show sequence

GAAACAGCTTCACTTTACCCGCATCACCCTCCCCCAGGGCAGCAGAGCTCATTACCAAGAGACA
CCTTTTTTGGTTCATGATTTCTGCACAGGAGAACGTTGAGCATGTAGGTGAGAGGCCAGCTTCC
CCAGATATGCAAAAGAGACCCACTTTTTTCTCACTCTATCCTGAATACTGAGTAGAACAAGGAG
TATCTTGGAGAACGGATGAAGGGCTCTGGGAGGGCATCAAAGGACGTGGATCCCACCAGCTCCG
TCACAAACTCCATCTATAGCCCAGCCTATCTCTCCTGCAGATCCTCCCAACCGGCCCACAGGCA
CCCACAACACTCCGTGTGCCTCACACAACACACATTCCTTCCTCATCACCATCTCCCTGTTCAT
ACTCCCCAAAGTGGCAAAAGCTTTTTCAGATAGCTAGTGAGCACAAAGAAAGCCGGCCCAATTA
TATGGAACTTGAAAAAAATCAAGCAAACTTGTGCAATCAGCACTGACCGAGGGAAAGCAAACAA
GAGCATGTGGTCTAGCTTTGCAGCACCAAGAGAAGGCATACAACCTTAAGGATTACTACCAAGA
AGGAAAAAGAAATGTGGAGTGGGTACAACCATAGAAAAGTTCTGAGAAAACCTCAGAATCTCCA
ACAGTGCTGACAGAAGTATAAGAAAGGAAGAAGAGGGCATAATAGTTATTTAAAGTAATAATGG
CCAAGAACTTCCCAAATCCGAGGATAGATTTGGACATCAGGTTCGTAAAGCTCATCGGTTTCCC
TAAAATTTTAATTCCAAATATTTTCTGCAAGACACATTACAATAAACTGTCAAAAAAATTAAGA
TAATAATAAAAATCACACACAAAAAAACCCTTCATATACACGGGAACCCCCATATAAAGCTATC
AGCAGCTTTTTCTGAAGAAACTTTGCAAGCCAGGAGAGAGTGGATGATATATTCAAAATGCAGA
AAGAAAAAACTGCCAACCTAAAATACTTTACCTGGAAAAGTTGTCCTTCAAAAATGAAGGAGAA
ATAAAGACCTTCTCAAATAAATAAAAGCTAAGGGAGTTCATCACCAGTAGGCCTGTCTTTCAAG
AAATGCTGAAAGAAGTTCTTCAAACTGAAATGAAAGAACACTAATTAGTAACATGAAAACTTAT
GAAAATATAAAACACATTGGTAAAGATTTTACAGATAAAAAAAGAAATCTCTTCAATCTGTCAC
ATTCTTGTGAATTTATGTAATCTTGATTGCTTGATTGATGGCTTTTTCTAATCTCCAACCCACC
ATACATGGGATGAGAGCACCAGGGACAATACCCAACTGTCCACCTGGACTGGAATATTTGACTC
AGATAAATCAGTTACTAGTGTGTCAACGTTTTGATCTTCTGGAAGTTCTCGGTTGTTTTGAAAC
TAGTAAGAAATATGAAGTCATGAACAGCCAAGGACAGAGAATTTATTTTGCCGAAGACAGAAGT
AATTGTTTCCTCAGATACCTCTGTGGACCTTCAAGATCTTTTACCATTACAATTTATGATAACA
TAGGCCGTGATGTCATAACTGTGCATAAAGCTCTAAGATGTAGCTGTTGCTGGAGAAACTGCTA
CCTACAAAAGCTAAAAGTTGAGGCTCCTCCTGGTGAAAAAATTGGATATGTGTACCAATACTTT
CACCCATTGTGGCCAATGTTTAAAATTAAAAATGCAAATAAGGAGGATATAATGAAAATCAGAG
GACCATGTGTGGTTTCCAGCTGTCTCACGGATCTAAATTTTAATTTATTGTCTCTGGATGAAGA
AATAGTTATTGGTAAGATTTCAAATACATGGGCTGGATTTATTAGGGAACTATCTACCAATGCT
GATAAATTTGGAATCCAGTTTCCACTTGATCTTGATGTTAAGATAAAAGCACTGATGCTTGGAG
CAAGTTTCCTCATTCCTCTTGGGACTCCCAAAGGTCTCTTTCAATTATGGCATCAGACTTAAGT
CCAGTATCACATGATCTGCATCTTCTGTGAATCCAGTTCCTTCTGTGAAACTTATCTGTCTACA
GCCCCTGGAAGACACACCTACTTTTCTCTCTCCATCCAGATCTGATTGGATTAGGCTTTGACAT
CACTGGGACAAGAATCAAGATCAGAATCAGCAGTGTTCTGCTGATAGATGTCAAATCATCAGCT
TTCCATGGAAATAAAAGGCCTTGGTTTACAGTGATTGAAGATTACCTTGGTGAACATATTCCCA
CAACAGCTGATTTCAATCTATCAATATGATGTCACTGAATGCAGAGATGGGAAGAGATGCTCAC
AATTGTCTCTTGTTAGCCTATGCAAGCTGGCTCCCACATACCATTGTTCTGACCTAAAAAAATA
ATAAGTTGGGAATTGTTCCATCATGCTTTATACTCTGAAGTAATTGGTATAATATTGGTATTTC
TAGGTCTGCCTTAAATTTTTGTTAGTGATAACAAGGTTTTGAGTAATTCATTTGATCTTATGAC
TCCTGAAATATATATTTTTTTCCTTTTTCTTAATGTAAAAAAATGCTCTTTTCTACAAGAAGCA
TATCCTCAGTTGCACTGTGTCTTTGAAAAGAAGCTCATATTTAGTATATAAATACCATATTGCC
ATATTCCAGGAAAAAGAAAATA

hide sequence

RefSeq Acc Id:

XR_002618302

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	23	41,591,502 - 41,625,899 (-)	NCBI
Dog10K_Boxer_Tasha	23	41,450,351 - 41,484,747 (-)	NCBI

Sequence:

show sequence

CTTGGGTATCCTAACTCTTCGTCACAACAACTTTGAGAGGCTGTGGATGTGGGCCAGATAGAGG
ATCAAGCCTCTCCTAATTCACCTCCCAGAGTAACACCATTAAGTGACAAAACTGGAGTATTCTA
CTAAATTCTTCCCCAAAGATGACTGATTTTGACAGTCATCTCTACATGAGAGTGCCTTTGTGAA
GTTCAGCAGTGCAGCAGAGATAGTCTGGCACACCTCTGGAGCAAAACATTATCAGAGAGTAAAC
ACATTGAAGAGGATTTTACAGATAAAAAAAGAAATCTCTTCAATCTGTCACATTCTTGTGAATT
TATGTAATCTTGATTGCTTGATTGATGGCTTTTTCTAATCTCCAACCCACCATACATGGGATGA
GAGCACCAGGGACAATACCCAACTGTCCACCTGGACTGGAATATTTGACTCAGATAAATCAGTT
ACTAGTGTGTCAACGTTTTGATCTTCTGGAAGTTCTCGGTTGTTTTGAAACTAGTAAGAAATAT
GAAGTCATGAACAGCCAAGGACAGAGAATTTATTTTGCCGAAGACAGAAGTAATTGTTTCCTCA
GATACCTCTGTGGACCTTCAAGATCTTTTACCATTACAATTTATGATAACATAGGCCGTGATGT
CATAACTGTGCATAAAGCTCTAAGATGTAGCTGTTGCTGGAGAAACTGCTACCTACAAAAGCTA
AAAGTTGAGGCTCCTCCTGGTGAAAAAATTGGATATGTGTACCAATACTTTCACCCATTGTGGC
CAATGTTTAAAATTAAAAATGCAAATAAGGAGGATATAATGAAAATCAGAGGACCATGTGTGGT
TTCCAGCTGTCTCACGGATCTAAATTTTAATTTATTGTCTCTGGATGAAGAAATAGTTATTGGT
AAGATTTCAAATACATGGGCTGGATTTATTAGGGAACTATCTACCAATGCTGATAAATTTGGAA
TCCAGTTTCCACTTGATCTTGATGTTAAGATAAAAGCACTGATGCTTGGAGCAAGTTTCCTCAT
TCCTCTTGGGACTCCCAAAGGTCTCTTTCAATTATGGCATCAGACTTAAGTCCAGTATCACATG
ATCTGCATCTTCTGTGAATCCAGTTCCTTCTGTGAAACTTATCTGTCTACAGCCCCTGGAAGAC
ACACCTACTTTTCTCTCTCCATCCAGATCTGATTGGATTAGGCTTTGACATCACTGGGACAAGA
ATCAAGATCAGAATCAGCAGTGTTCTGCTGATAGATGTCAAATCATCAGCTTTCCATGGAAATA
AAAGGCCTTGGTTTACAGTGATTGAAGATTACCTTGGTGAACATATTCCCACAACAGCTGATTT
CAATCTATCAATATGATGTCACTGAATGCAGAGATGGGAAGAGATGCTCACAATTGTCTCTTGT
TAGCCTATGCAAGCTGGCTCCCACATACCATTGTTCTGACCTAAAAAAATAATAAGTTGGGAAT
TGTTCCATCATGCTTTATACTCTGAAGTAATTGGTATAATATTGGTATTTCTAGGTCTGCCTTA
AATTTTTGTTAGTGATAACAAGGTTTTGAGTAATTCATTTGATCTTATGACTCCTGAAATATAT
ATTTTTTTCCTTTTTCTTAATGTAAAAAAATGCTCTTTTCTACAAGAAGCATATCCTCAGTTGC
ACTGTGTCTTTGAAAAGAAGCTCATATTTAGTATATAAATACCATATTGCCATATTCCAGGAAA
AAGAAAATAA

hide sequence

RefSeq Acc Id:

XR_002618303

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	23	41,591,511 - 41,625,918 (-)	NCBI
Dog10K_Boxer_Tasha	23	41,450,359 - 41,484,766 (-)	NCBI

Sequence:

show sequence

TGTTTCTTTGTCGTGGCTGCTTGGGTATCCTAACTCTTCGTCACAACAACTTTGAGAGGCTGTG
GATGTGGGCCAGATAGAGGATCAAGCCTCTCCTAATTCACCTCCCAGATTTTACAGATAAAAAA
AGAAATCTCTTCAATCTGTCACATTCTTGTGAATTTATGTAATCTTGATTGCTTGATTGATGGC
TTTTTCTAATCTCCAACCCACCATACATGGGATGAGAGCACCAGGGACAATACCCAACTGTCCA
CCTGGACTGGAATATTTGACTCAGATAAATCAGTTACTAGTGTGTCAACGTTTTGATCTTCTGG
AAGTTCTCGGTTGTTTTGAAACTAGTAAGAAATATGAAGTCATGAACAGCCAAGGACAGAGAAT
TTATTTTGCCGAAGACAGAAGTAATTGTTTCCTCAGATACCTCTGTGGACCTTCAAGATCTTTT
ACCATTACAATTTATGATAACATAGGCCGTGATGTCATAACTGTGCATAAAGCTCTAAGATGTA
GCTGTTGCTGGAGAAACTGCTACCTACAAAAGCTAAAAGTTGAGGCTCCTCCTGGTGAAAAAAT
TGGATATGTGTACCAATACTTTCACCCATTGTGGCCAATGTTTAAAATTAAAAATGCAAATAAG
GAGGATATAATGAAAATCAGAGGACCATGTGTGGTTTCCAGCTGTCTCACGGATCTAAATTTTA
ATTTATTGTCTCTGGATGAAGAAATAGTTATTGGTAAGATTTCAAATACATGGGCTGGATTTAT
TAGGGAACTATCTACCAATGCTGATAAATTTGGAATCCAGTTTCCACTTGATCTTGATGTTAAG
ATAAAAGCACTGATGCTTGGAGCAAGTTTCCTCATTTTCCTTCTGTGAAACTTATCTGTCTACA
GCCCCTGGAAGACACACCTACTTTTCTCTCTCCATCCAGATCTGATTGGATTAGGCTTTGACAT
CACTGGGACAAGAATCAAGATCAGAATCAGCAGTGTTCTGCTGATAGATGTCAAATCATCAGCT
TTCCATGGAAATAAAAGGCCTTGGTTTACAGTGATTGAAGATTACCTTGGTGAACATATTCCCA
CAACAGCTGATTTCAATCTATCAATATGATGTCACTGAATGCAGAGATGGGAAGAGATGCTCAC
AATTGTCTCTTGTTAGCCTATGCAAGCTGGCTCCCACATACCATTGTTCTGACCTAAAAAAATA
ATAAGTTGGGAATTGTTCCATCATGCTTTATACTCTGAAGTAATTGGTATAATATTGGTATTTC
TAGGTCTGCCTTAAATTTTTGTTAGTGATAACAAGGTTTTGAGTAATTCATTTGATCTTATGAC
TCCTGAAATATATATTTTTTTCCTTTTTCTTAATGTAAAAAAATGCTCTTTTCTACAAGAAGCA
TATCCTCAGTTGCACTGTGTCTTTGAAAAGAAGCTCATATTTAGTATATAAATACCATATTGCC
ATATTCCAGGAAAA

hide sequence

RefSeq Acc Id:

XR_002618304

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	23	41,591,499 - 41,625,918 (-)	NCBI
Dog10K_Boxer_Tasha	23	41,450,349 - 41,484,766 (-)	NCBI

Sequence:

show sequence

TGTTTCTTTGTCGTGGCTGCTTGGGTATCCTAACTCTTCGTCACAACAACTTTGAGAGGCTGTG
GATGTGGGCCAGATAGAGGATCAAGCCTCTCCTAATTCACCTCCCAGATTTTACAGATAAAAAA
AGAAATCTCTTCAATCTGTCACATTCTTGTGAATTTATGTAATCTTGATTGCTTGATTGATGGC
TTTTTCTAATCTCCAACCCACCATACATGGGATGAGAGCACCAGGGACAATACCCAACTGTCCA
CCTGGACTGGAATATTTGACTCAGATAAATCAGTTACTAGTGTGTCAACGTTTTGATCTTCTGG
AAGTTCTCGGTTGTTTTGAAACTAGTAAGAAATATGAAGTCATGAACAGCCAAGGACAGAGAAT
TTATTTTGCCGAAGACAGAAGTAATTGTTTCCTCAGATACCTCTGTGGACCTTCAAGATCTTTT
ACCATTACAATTTATGATAACATAGGCCGTGATGTCATAACTGTGCATAAAGCTCTAAGATGTA
GCTGTTGCTGGAGAAACTGCTACCTACAAAAGCTAAAAGTTGAGGCTCCTCCTGGTGAAAAAAT
TGGATATGTGTACCAATACTTTCACCCATTGTGGCCAATGTTTAAAATTAAAAATGCAAATAAG
GAGGATATAATGAAAATCAGAGGACCATGTGTGGTTTCCAGCTGTCTCACGGATCTAAATTTTA
ATTTATTGTCTCTGGATGAAGAAATAGTTATTGGTAAGATTTCAAATACATGGGCTGGATTTAT
TAGGGAACTATCTACCAATGCTGATAAATTTGGAATCCAGTTTCCACTTGATCTTGATGTTAAG
ATAAAAGCACTGATGCTTGGAGCAAGTTTCCTCATTTTCCTTCTGTGAAACTTATCTGTCTACA
GCCCCTGGAAGACACACCTACTTTTCTCTCTCCATCCAGATCTGATTGGATTAGGCTTTGACAT
CACTGGGACAAGATGAGTGCTGCCATTTTTGGGAAACCCCAGTGCTCCTGGCTGTTATGCTTCT
GGACATCCACTACAATAGTGGTCCTCAAACTTTAGCATGCATCAAAATCATCTGGAGGGATTAT
TACAACTCAGACCACTGCACCCCAGCCACAAAGTATCTGATTCTAATCAAGATCAGAATCAGCA
GTGTTCTGCTGATAGATGTCAAATCATCAGCTTTCCATGGAAATAAAAGGCCTTGGTTTACAGT
GATTGAAGATTACCTTGGTGAACATATTCCCACAACAGCTGATTTCAATCTATCAATATGATGT
CACTGAATGCAGAGATGGGAAGAGATGCTCACAATTGTCTCTTGTTAGCCTATGCAAGCTGGCT
CCCACATACCATTGTTCTGACCTAAAAAAATAATAAGTTGGGAATTGTTCCATCATGCTTTATA
CTCTGAAGTAATTGGTATAATATTGGTATTTCTAGGTCTGCCTTAAATTTTTGTTAGTGATAAC
AAGGTTTTGAGTAATTCATTTGATCTTATGACTCCTGAAATATATATTTTTTTCCTTTTTCTTA
ATGTAAAAAAATGCTCTTTTCTACAAGAAGCATATCCTCAGTTGCACTGTGTCTTTGAAAAGAA
GCTCATATTTAGTATATAAATACCATATTGCCATATTCCAGGAAAAAGAAAATAAAAT

hide sequence

RefSeq Acc Id:

XR_002618305

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	23	41,591,425 - 41,625,918 (-)	NCBI
Dog10K_Boxer_Tasha	23	41,450,324 - 41,484,766 (-)	NCBI

Sequence:

show sequence

TGTTTCTTTGTCGTGGCTGCTTGGGTATCCTAACTCTTCGTCACAACAACTTTGAGAGGCTGTG
GATGTGGGCCAGATAGAGGATCAAGCCTCTCCTAATTCACCTCCCAGATTTTACAGATAAAAAA
AGAAATCTCTTCAATCTGTCACATTCTTGTGAATTTATGTAATCTTGATTGCTTGATTGATGGC
TTTTTCTAATCTCCAACCCACCATACATGGGATGAGAGCACCAGGGACAATACCCAACTGTCCA
CCTGGACTGGAATATTTGACTCAGATAAATCAGTTACTAGTGTGTCAACGTTTTGATCTTCTGG
AAGTTCTCGGTTGTTTTGAAACTAGTAAGAAATATGAAGTCATGAACAGCCAAGGACAGAGAAT
TTATTTTGCCGAAGACAGAAGTAATTGTTTCCTCAGATACCTCTGTGGACCTTCAAGATCTTTT
ACCATTACAATTTATGATAACATAGGCCGTGATGTCATAACTGTGCATAAAGCTCTAAGATGTA
GCTGTTGCTGGAGAAACTGCTACCTACAAAAGCTAAAAGTTGAGGCTCCTCCTGGTGAAAAAAT
TGGATATGTGTACCAATACTTTCACCCATTGTGGCCAATGTTTAAAATTAAAAATGCAAATAAG
GAGGATATAATGAAAATCAGAGGACCATGTGTGGTTTCCAGCTGTCTCACGGATCTAAATTTTA
ATTTATTGTCTCTGGATGAAGAAATAGTTATTGTTCCTTCTGTGAAACTTATCTGTCTACAGCC
CCTGGAAGACACACCTACTTTTCTCTCTCCATCCAGATCTGATTGGATTAGGCTTTGACATCAC
TGGGACAAGATGAGTGCTGCCATTTTTGGGAAACCCCAGTGCTCCTGGCTGTTATGCTTCTGGA
CATCCACTACAATAGTGGTCCTCAAACTTTAGCATGCATCAAAATCATCTGGAGGGATTATTAC
AACTCAGACCACTGCACCCCAGCCACAAAGTATCTGATTCTAATCAAGATCAGAATCAGCAGTG
TTCTGCTGATAGATGTCAAATCATCAGCTTTCCATGGAAATAAAAGGCCTTGGTTTACAGTGAT
TGAAGATTACCTTGGTGAACATATTCCCACAACAGCTGATTTCAATCTATCAATATGATGTCAC
TGAATGCAGAGATGGGAAGAGATGCTCACAATTGTCTCTTGTTAGCCTATGCAAGCTGGCTCCC
ACATACCATTGTTCTGACCTAAAAAAATAATAAGTTGGGAATTGTTCCATCATGCTTTATACTC
TGAAGTAATTGGTATAATATTGGTATTTCTAGGTCTGCCTTAAATTTTTGTTAGTGATAACAAG
GTTTTGAGTAATTCATTTGATCTTATGACTCCTGAAATATATATTTTTTTCCTTTTTCTTAATG
TAAAAAAATGCTCTTTTCTACAAGAAGCATATCCTCAGTTGCACTGTGTCTTTGAAAAGAAGCT
CATATTTAGTATATAAATACCATATTGCCATATTCCAGGAAAAAGAAAATAAAATGAAGAAAAA
GCAAAAAAGAAACTTTATAAGCCTACTACCTGACAAGTACATCTGTTGGCTAAATAATTGGCAG
C

hide sequence

RefSeq Acc Id:

XR_005300281

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	23	42,209,693 - 42,244,126 (-)	NCBI

RefSeq Acc Id:

XR_005300282

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	23	42,209,684 - 42,244,126 (-)	NCBI

RefSeq Acc Id:

XR_005300283

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	23	42,209,660 - 42,244,126 (-)	NCBI

RefSeq Acc Id:

XR_005313876

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	23	41,453,606 - 41,484,766 (-)	NCBI

RefSeq Acc Id:

XR_005343376

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	23	41,797,773 - 41,832,175 (-)	NCBI

RefSeq Acc Id:

XR_005343377

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	23	41,797,764 - 41,832,175 (-)	NCBI

RefSeq Acc Id:

XR_005343378

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	23	41,797,739 - 41,832,175 (-)	NCBI

RefSeq Acc Id:

XR_005377159

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	23	42,116,231 - 42,150,665 (-)	NCBI

RefSeq Acc Id:

XR_005377160

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	23	42,116,222 - 42,150,665 (-)	NCBI

RefSeq Acc Id:

XR_005377161

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	23	42,116,197 - 42,150,665 (-)	NCBI

RefSeq Acc Id:

XR_005411093

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	23	41,872,726 - 41,907,153 (-)	NCBI

RefSeq Acc Id:

XR_005411094

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	23	41,872,717 - 41,907,153 (-)	NCBI

RefSeq Acc Id:

XR_005411095

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	23	41,872,694 - 41,907,153 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_013962008	(Get FASTA)	NCBI Sequence Viewer
	XP_022264432	(Get FASTA)	NCBI Sequence Viewer
	XP_022264434	(Get FASTA)	NCBI Sequence Viewer
	XP_038288526	(Get FASTA)	NCBI Sequence Viewer
	XP_038288527	(Get FASTA)	NCBI Sequence Viewer
	XP_038288528	(Get FASTA)	NCBI Sequence Viewer
	XP_038288529	(Get FASTA)	NCBI Sequence Viewer
	XP_038288530	(Get FASTA)	NCBI Sequence Viewer
	XP_038363826	(Get FASTA)	NCBI Sequence Viewer
	XP_038363827	(Get FASTA)	NCBI Sequence Viewer
	XP_038363828	(Get FASTA)	NCBI Sequence Viewer
	XP_038363829	(Get FASTA)	NCBI Sequence Viewer
	XP_038363830	(Get FASTA)	NCBI Sequence Viewer
	XP_038427065	(Get FASTA)	NCBI Sequence Viewer
	XP_038427066	(Get FASTA)	NCBI Sequence Viewer
	XP_038427067	(Get FASTA)	NCBI Sequence Viewer
	XP_038427068	(Get FASTA)	NCBI Sequence Viewer
	XP_038427069	(Get FASTA)	NCBI Sequence Viewer
	XP_038491258	(Get FASTA)	NCBI Sequence Viewer
	XP_038491259	(Get FASTA)	NCBI Sequence Viewer
	XP_038491260	(Get FASTA)	NCBI Sequence Viewer
	XP_038491261	(Get FASTA)	NCBI Sequence Viewer
	XP_038491262	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000012042.4
	ENSCAFP00000038657.1
	ENSCAFP00000055707.2
	ENSCAFP00030011204.1
	ENSCAFP00040013249.1
	ENSCAFP00845029148
	ENSCAFP00845029148.1

RefSeq Acc Id:	XP_013962008 ⟸ XM_014106533
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0MFZ9 (UniProtKB/TrEMBL), A0A8I3PA37 (UniProtKB/TrEMBL), A0A8C0QEU7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAFSNLQPTIHGMRAPGTIPNCPPGLEYLTQINQLLVCQRFDLLEVLGCFETSKKYEVMNSQGQ RIYFAEDRSNCFLRYLCGPSRSFTITIYDNIGRDVITVHKALRCSCCWRNCYLQKLKVEAPPGE KIGYVYQYFHPLWPMFKIKNANKEDIMKIRGPCVVSSCLTDLNFNLLSLDEEIVIGKISNTWAG FIRELSTNADKFGIQFPLDLDVKIKALMLGASFLIDYMYFELWS hide sequence

RefSeq Acc Id:

XP_022264432 ⟸ XM_022408724

- Peptide Label:

isoform X2

- Sequence:

show sequence

MAFSNLQPTIHGMRAPGTIPNCPPGLEYLTQINQLLVCQRFDLLEVLGCFETSKKYEVMNSQGQ
RIYFAEDRSNCFLRYLCGPSRSFTITIYDNIGRDVITVHKALRCSCCWRNCYLQKLKVEAPPGE
KIGYVYQYFHPLWPMFKIKNANKEDIMKIRGPCVVSSCLTDLNFNLLSLDEEIVIVPSVKLICL
QPLEDTPTFLSPSRSDWIRL

hide sequence

RefSeq Acc Id:	XP_022264434 ⟸ XM_022408726
- Peptide Label:	isoform X3
- Sequence:	show sequence MAFSNLQPTIHGMRAPGTIPNCPPGLEYLTQINQLLVCQRFDLLEVLGCFETSKKYEVMNSQGQ RIYFAEDRSNCFLRYLCGPSRSFTITIYDNIGRDVITVHKALRCSCCWRNCYLQKLKVEAPPGE KIGYVYQYFHPLWPMFKIKNANKEDIMKIRGPCVVSSCLTDLNFNNQDQNQQCSADRCQIISFP WK hide sequence

RefSeq Acc Id:	XP_038363829 ⟸ XM_038507901
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038363830 ⟸ XM_038507902
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038363826 ⟸ XM_038507898
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038363828 ⟸ XM_038507900
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038363827 ⟸ XM_038507899
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038491261 ⟸ XM_038635333
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038491262 ⟸ XM_038635334
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038491258 ⟸ XM_038635330
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038491260 ⟸ XM_038635332
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038491259 ⟸ XM_038635331
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038288529 ⟸ XM_038432601
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038288530 ⟸ XM_038432602
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038288526 ⟸ XM_038432598
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0MFZ9 (UniProtKB/TrEMBL), A0A8I3PA37 (UniProtKB/TrEMBL), A0A8C0QEU7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038288528 ⟸ XM_038432600
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0MFZ9 (UniProtKB/TrEMBL), A0A8I3PA37 (UniProtKB/TrEMBL), A0A8C0QEU7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038288527 ⟸ XM_038432599
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0MFZ9 (UniProtKB/TrEMBL), A0A8I3PA37 (UniProtKB/TrEMBL), A0A8C0QEU7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038427068 ⟸ XM_038571140
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038427069 ⟸ XM_038571141
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038427065 ⟸ XM_038571137
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0MFZ9 (UniProtKB/TrEMBL), A0A8C0QEU7 (UniProtKB/TrEMBL), A0A8I3PA37 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038427067 ⟸ XM_038571139
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0MFZ9 (UniProtKB/TrEMBL), A0A8C0QEU7 (UniProtKB/TrEMBL), A0A8I3PA37 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038427066 ⟸ XM_038571138
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0MFZ9 (UniProtKB/TrEMBL), A0A8C0QEU7 (UniProtKB/TrEMBL), A0A8I3PA37 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845029148 ⟸ ENSCAFT00845037219

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000008181	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00000051275	UniProtKB/TrEMBL
	ENSCAFG00030006973	UniProtKB/TrEMBL
	ENSCAFG00040008189	UniProtKB/TrEMBL
	ENSCAFG00845021095	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000013012.6	UniProtKB/TrEMBL
	ENSCAFT00000047852.3	UniProtKB/TrEMBL
	ENSCAFT00000093688.2	UniProtKB/TrEMBL
	ENSCAFT00030012814.1	UniProtKB/TrEMBL
	ENSCAFT00040015293.1	UniProtKB/TrEMBL
	ENSCAFT00845037219	ENTREZGENE
	ENSCAFT00845037219.1	UniProtKB/TrEMBL
InterPro	Scramblase	UniProtKB/TrEMBL
	Tubby-like_C	UniProtKB/TrEMBL
NCBI Gene	LOC100688853	ENTREZGENE
PANTHER	PHOSPHOLIPID SCRAMBLASE	UniProtKB/TrEMBL
	PHOSPHOLIPID SCRAMBLASE 1	UniProtKB/TrEMBL
	PTHR23248	UniProtKB/TrEMBL
Pfam	Scramblase	UniProtKB/TrEMBL
Superfamily-SCOP	SSF54518	UniProtKB/TrEMBL
UniProt	A0A8C0MFZ9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0QEU7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3PA37	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0P533_CANLF	UniProtKB/TrEMBL
	A0A8P0SD99_CANLF	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2017-11-21	LOC100688853	phospholipid scramblase 1-like	LOC106557614	uncharacterized LOC106557614	Data merged from RGD:12135666	737654	PROVISIONAL
2017-11-21	LOC100688853	phospholipid scramblase 1-like	LOC106557615	uncharacterized LOC106557615	Data merged from RGD:12218820	737654	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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