STK32C (serine/threonine kinase 32C) - Rat Genome Database

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Gene: STK32C (serine/threonine kinase 32C) Canis lupus familiaris
Analyze
Symbol: STK32C
Name: serine/threonine kinase 32C
RGD ID: 12215228
Description: ENCODES a protein that exhibits ATP binding (inferred); protein kinase activity (inferred); protein serine/threonine kinase activity (inferred); ASSOCIATED WITH distal 10q deletion syndrome (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: serine/threonine-protein kinase 32C
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12840,187,167 - 40,250,861 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2840,187,590 - 40,243,857 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2840,251,296 - 40,315,673 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02840,832,458 - 40,897,131 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2840,822,347 - 40,897,360 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12840,316,368 - 40,380,911 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02840,304,236 - 40,369,609 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02840,703,568 - 40,768,728 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
STK32C
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12840,187,167 - 40,250,861 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2840,187,590 - 40,243,857 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2840,251,296 - 40,315,673 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02840,832,458 - 40,897,131 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2840,822,347 - 40,897,360 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12840,316,368 - 40,380,911 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02840,304,236 - 40,369,609 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02840,703,568 - 40,768,728 (-)NCBIUU_Cfam_GSD_1.0
STK32C
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3810132,207,482 - 132,332,235 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl10132,207,492 - 132,331,847 (-)EnsemblGRCh38hg38GRCh38
GRCh3710134,020,986 - 134,145,384 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3610133,870,986 - 133,971,467 (-)NCBINCBI36Build 36hg18NCBI36
Build 3410133,870,985 - 133,971,467NCBI
Celera10127,666,128 - 127,766,505 (-)NCBICelera
Cytogenetic Map10q26.3NCBI
HuRef10127,572,425 - 127,673,239 (-)NCBIHuRef
CHM1_110134,303,008 - 134,402,870 (-)NCBICHM1_1
T2T-CHM13v2.010133,150,298 - 133,274,880 (-)NCBIT2T-CHM13v2.0
Stk32c
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397138,683,554 - 138,793,223 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7138,683,554 - 138,793,223 (-)EnsemblGRCm39 Ensembl
GRCm387139,103,638 - 139,213,307 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7139,103,638 - 139,213,307 (-)EnsemblGRCm38mm10GRCm38
MGSCv377146,289,537 - 146,399,206 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367138,954,959 - 139,039,793 (-)NCBIMGSCv36mm8
Celera7138,898,989 - 139,006,458 (-)NCBICelera
Cytogenetic Map7F4NCBI
cM Map784.03NCBI
Stk32c
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81203,330,325 - 203,411,325 (-)NCBIGRCr8
mRatBN7.21193,900,718 - 193,981,723 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1193,900,718 - 193,981,723 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1202,271,045 - 202,352,008 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01209,405,603 - 209,486,654 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01202,079,357 - 202,160,416 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01211,440,335 - 211,520,699 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1211,440,335 - 211,520,699 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01218,367,084 - 218,446,952 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41198,883,704 - 198,963,637 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11199,033,695 - 199,113,592 (-)NCBI
Celera1191,589,632 - 191,670,335 (-)NCBICelera
Cytogenetic Map1q41NCBI
Stk32c
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554779,846,397 - 9,948,784 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554779,846,602 - 9,947,927 (-)NCBIChiLan1.0ChiLan1.0
STK32C
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v28144,175,523 - 144,302,959 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan110144,180,880 - 144,308,316 (-)NCBINHGRI_mPanPan1
PanPan1.110133,099,671 - 133,199,473 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl10133,099,678 - 133,199,479 (-)Ensemblpanpan1.1panPan2
Stk32c
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244072136,886,612 - 6,959,442 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648618,599,273 - 18,674,692 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648618,601,854 - 18,674,686 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
STK32C
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl14140,512,451 - 140,591,686 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.114140,512,505 - 140,596,134 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.214152,345,564 - 152,447,128 (-)NCBISscrofa10.2Sscrofa10.2susScr3
STK32C
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.19124,797,427 - 124,920,284 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl9124,797,095 - 124,895,621 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604886,282,435 - 86,385,638 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Stk32c
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473714,511,054 - 14,605,626 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473714,511,025 - 14,606,319 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in STK32C
2136 total Variants

Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 14 10

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_014109147 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038440985 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038440986 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038460704 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038515564 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038579172 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038579173 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038643403 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038643404 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005347040 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005347041 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000028 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000301 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000071 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000374 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000028 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCAFT00000017677   ⟹   ENSCAFP00000016366
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2840,187,590 - 40,243,857 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845042642   ⟹   ENSCAFP00845033436
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2840,822,347 - 40,897,360 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845042789   ⟹   ENSCAFP00845033541
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2840,832,882 - 40,895,739 (-)Ensembl
RefSeq Acc Id: XM_014109147   ⟹   XP_013964622
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12840,187,167 - 40,250,861 (-)NCBI
Dog10K_Boxer_Tasha2840,251,296 - 40,313,762 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038440985   ⟹   XP_038296913
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02840,832,458 - 40,897,131 (-)NCBI
RefSeq Acc Id: XM_038440986   ⟹   XP_038296914
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02840,832,458 - 40,895,200 (-)NCBI
RefSeq Acc Id: XM_038460704   ⟹   XP_038316632
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha2840,251,296 - 40,315,673 (-)NCBI
RefSeq Acc Id: XM_038515564   ⟹   XP_038371492
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12840,316,368 - 40,380,911 (-)NCBI
RefSeq Acc Id: XM_038579172   ⟹   XP_038435100
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02840,703,568 - 40,768,728 (-)NCBI
RefSeq Acc Id: XM_038579173   ⟹   XP_038435101
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02840,703,568 - 40,766,815 (-)NCBI
RefSeq Acc Id: XM_038643403   ⟹   XP_038499331
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02840,304,236 - 40,369,609 (-)NCBI
RefSeq Acc Id: XM_038643404   ⟹   XP_038499332
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02840,304,236 - 40,367,706 (-)NCBI
RefSeq Acc Id: XR_005347040
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12840,323,614 - 40,380,911 (-)NCBI
RefSeq Acc Id: XR_005347041
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12840,323,614 - 40,379,001 (-)NCBI
RefSeq Acc Id: XP_013964622   ⟸   XM_014109147
- Peptide Label: isoform X2
- UniProtKB: A0A8C0MVY8 (UniProtKB/TrEMBL),   A0A8I3PL24 (UniProtKB/TrEMBL),   A0A8C0TRB9 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSCAFP00000016366   ⟸   ENSCAFT00000017677
RefSeq Acc Id: XP_038371492   ⟸   XM_038515564
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038499331   ⟸   XM_038643403
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038499332   ⟸   XM_038643404
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038296913   ⟸   XM_038440985
- Peptide Label: isoform X1
- UniProtKB: A0A8C0L2I1 (UniProtKB/TrEMBL),   A0A8P0SG81 (UniProtKB/TrEMBL),   A0A8C0TRD4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038296914   ⟸   XM_038440986
- Peptide Label: isoform X2
- UniProtKB: A0A8C0MVY8 (UniProtKB/TrEMBL),   A0A8I3PL24 (UniProtKB/TrEMBL),   A0A8C0TRB9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038316632   ⟸   XM_038460704
- Peptide Label: isoform X1
- UniProtKB: A0A8C0L2I1 (UniProtKB/TrEMBL),   A0A8P0SG81 (UniProtKB/TrEMBL),   A0A8C0TRD4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038435100   ⟸   XM_038579172
- Peptide Label: isoform X1
- UniProtKB: A0A8C0L2I1 (UniProtKB/TrEMBL),   A0A8C0TRD4 (UniProtKB/TrEMBL),   A0A8P0SG81 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038435101   ⟸   XM_038579173
- Peptide Label: isoform X2
- UniProtKB: A0A8C0MVY8 (UniProtKB/TrEMBL),   A0A8C0TRB9 (UniProtKB/TrEMBL),   A0A8I3PL24 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCAFP00845033541   ⟸   ENSCAFT00845042789
Ensembl Acc Id: ENSCAFP00845033436   ⟸   ENSCAFT00845042642
Protein Domains
Protein kinase


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000011107 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030007715 UniProtKB/TrEMBL
  ENSCAFG00040023648 UniProtKB/TrEMBL
  ENSCAFG00845024042 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000017677.5 UniProtKB/TrEMBL
  ENSCAFT00000101130.1 UniProtKB/TrEMBL
  ENSCAFT00030014157.1 UniProtKB/TrEMBL
  ENSCAFT00030014227.1 UniProtKB/TrEMBL
  ENSCAFT00040044143.1 UniProtKB/TrEMBL
  ENSCAFT00040044170.1 UniProtKB/TrEMBL
  ENSCAFT00845042642 ENTREZGENE
  ENSCAFT00845042642.1 UniProtKB/TrEMBL
  ENSCAFT00845042789 ENTREZGENE
  ENSCAFT00845042789.1 UniProtKB/TrEMBL
Gene3D-CATH Transferase(Phosphotransferase) domain 1 UniProtKB/TrEMBL
InterPro Kinase-like_dom_sf UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/TrEMBL
  Protein_kinase_ATP_BS UniProtKB/TrEMBL
  Ser/Thr_kinase_AS UniProtKB/TrEMBL
KEGG Report cfa:491589 UniProtKB/TrEMBL
NCBI Gene STK32C ENTREZGENE
PANTHER G PROTEIN-COUPLED RECEPTOR KINASE/RIBOSOMAL PROTEIN S6 KINASE UniProtKB/TrEMBL
  SERINE_THREONINE KINASE 32C UniProtKB/TrEMBL
Pfam Pkinase UniProtKB/TrEMBL
PROSITE PROTEIN_KINASE_ATP UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/TrEMBL
  PROTEIN_KINASE_ST UniProtKB/TrEMBL
SMART S_TKc UniProtKB/TrEMBL
Superfamily-SCOP SSF56112 UniProtKB/TrEMBL
UniProt A0A8C0L2I1 ENTREZGENE
  A0A8C0MM51_CANLF UniProtKB/TrEMBL
  A0A8C0MVY8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0TRB9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0TRD4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3PL24 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3PPM0_CANLF UniProtKB/TrEMBL
  A0A8P0SG81 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:46915 ENTREZGENE