TMEM179 (transmembrane protein 179)

Gene: TMEM179 (transmembrane protein 179) Canis lupus familiaris

Analyze

Symbol:

TMEM179

Name:

transmembrane protein 179

RGD ID:

12214135

Description:

ASSOCIATED WITH Charcot-Marie-Tooth disease axonal type 2O (ortholog); FOUND IN membrane (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

LOC106559206; uncharacterized LOC106559206

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	8	72,177,054 - 72,188,324 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	8	72,179,141 - 72,188,917 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	8	71,684,182 - 71,702,232 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	8	72,453,248 - 72,471,387 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	8	72,453,250 - 72,464,556 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	8	72,142,070 - 72,151,068 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	8	72,179,187 - 72,197,260 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	8	72,578,600 - 72,596,714 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Charcot-Marie-Tooth disease axonal type 2O (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

membrane (IEA)

References

Genomics

Comparative Map Data

TMEM179
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	8	72,177,054 - 72,188,324 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	8	72,179,141 - 72,188,917 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	8	71,684,182 - 71,702,232 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	8	72,453,248 - 72,471,387 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	8	72,453,250 - 72,464,556 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	8	72,142,070 - 72,151,068 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	8	72,179,187 - 72,197,260 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	8	72,578,600 - 72,596,714 (-)	NCBI		UU_Cfam_GSD_1.0

TMEM179
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	14	104,590,864 - 104,604,772 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	14	104,474,678 - 104,605,647 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	14	105,057,201 - 105,071,109 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	14	104,131,465 - 104,142,142 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	14	85,116,467 - 85,127,144 (-)	NCBI		Celera
Cytogenetic Map	14	q32.33	NCBI
HuRef	14	85,256,892 - 85,263,031 (-)	NCBI		HuRef
CHM1_1	14	104,997,934 - 105,008,611 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	14	98,833,645 - 98,847,553 (-)	NCBI		T2T-CHM13v2.0

Tmem179
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	12	112,466,618 - 112,477,594 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	12	112,466,623 - 112,483,181 (-)	Ensembl		GRCm39 Ensembl
GRCm38	12	112,500,184 - 112,511,160 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	12	112,500,189 - 112,516,747 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	12	113,738,395 - 113,749,371 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	12	112,947,998 - 112,958,980 (-)	NCBI		MGSCv36	mm8
MGSCv36	12	106,777,537 - 106,788,564 (-)	NCBI		MGSCv36	mm8
Celera	12	113,709,236 - 113,720,225 (-)	NCBI		Celera
Cytogenetic Map	12	F1	NCBI
cM Map	12	61.2	NCBI

Tmem179
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	137,390,422 - 137,401,438 (-)	NCBI		GRCr8
mRatBN7.2	6	131,569,289 - 131,580,413 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	131,569,290 - 131,580,305 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	6	131,738,580 - 131,749,562 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	132,035,550 - 132,046,524 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	131,397,899 - 131,408,911 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	137,073,684 - 137,084,739 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	137,073,685 - 137,084,739 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	6	146,081,900 - 146,092,800 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	6	137,339,658 - 137,350,559 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	6	136,944,771 - 137,374,966 (-)	NCBI
Celera	6	129,117,221 - 129,127,935 (-)	NCBI		Celera
Cytogenetic Map	6	q32	NCBI

Tmem179
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955538	3,083,815 - 3,093,843 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955538	3,083,815 - 3,093,843 (-)	NCBI	ChiLan1.0	ChiLan1.0

TMEM179
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	15	105,775,009 - 105,787,702 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	14	104,991,518 - 105,004,212 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	14	85,241,752 - 85,254,473 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	14	105,034,292 - 105,048,927 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	14	105,034,292 - 105,048,932 (-)	Ensembl	panpan1.1		panPan2

Tmem179
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	1,941,024 - 1,951,776 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936621	770,123 - 780,763 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936621	770,007 - 780,735 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TMEM179
(Sus scrofa - pig)

No map positions available.

TMEM179
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	24	82,526,329 - 82,540,086 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	24	82,527,205 - 82,539,165 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666053	69,885,420 - 69,936,480 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tmem179
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624734	627,061 - 639,095 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624734	627,163 - 636,636 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in TMEM179
191 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium			8						12
Low	4	5	8	1	5	1	6	6		8	10	6
Below cutoff	1		6	5	1	5

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_022422421	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038484372	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038545888	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038545889	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038545890	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038545891	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038545892	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038596781	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038596785	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038596791	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038609954	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038609955	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038609956	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038609957	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038674796	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038674797	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038674798	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038674799	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000088	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000096	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000053	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000029115 ⟹ ENSCAFP00000027074

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	8	72,179,141 - 72,188,917 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845037892 ⟹ ENSCAFP00845029691

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	8	72,453,250 - 72,464,556 (-)	Ensembl

RefSeq Acc Id:

XM_022422421 ⟹ XP_022278129

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	8	72,177,054 - 72,188,324 (-)	NCBI
Dog10K_Boxer_Tasha	8	71,684,182 - 71,695,497 (-)	NCBI

Sequence:

show sequence

CAATTTCCTCTTCGCGCAGTGCGTGTGCTACTTCCTGGCCTTCCTGTTCAGCTTCGTGGTGGTG
GTGCCGCTGTCCGAGAATGGCCACGACTTCCGCGGCCGCTGCCTGCTGTTCACCGAGGGCATGT
GGCTGAGCGCCAACCTGACGGTGCAGGAGCGCGAGCGCTTCACGGTGCAGGAGTGGGGCCCGCC
GGCCGCCTGCCGCTTCAGCCTGCTGGCCAGCCTCCTGTCGCTGCTGCTCGCCGCCGCGCACGCC
TGGCGCACGCTCTTCTTCCTCTGCAAGGGACACGAGGGCTCCTTCCTCTATGCCTTCCTGAACC
TCCTGGTCAGCGCTTCCGTGGTCTTCCTCGTCTTCATCGCCAGCACCATCGTGAGCGTGGGCTT
CACCATGTGGTGTGACGCCATCACTGAGAAGGGCACCGTGCCCCACAGCTGTGAAGAGCTCCAG
GACATCAATTTGGAGCTAAACGTGGACAACTCTGCCTTCTACGACCAGTTTGCCATCGCCCAGT
TCGGCCTCTGGGCCTCGTGGCTGGCCTGGCTGGCCATCACCATCCTGGCTTTCCTGAAAGTCTA
CCACAACTACCGCCAGGAGGACCTGCTAGACAACCTGGTCCATGAGAAGGAGCTGCTGCTGGCC
AGGCCGACCCCCCGCGCCTCCTTCCAGGAGGAGAAGAGCGCTGTCATCTAGCTGTGGCCAGGGG
AGCCCGGCCCTGGATGCCCCCTCGCCCCGCCCAGGGCCCTCGGGCCAACCCCGGGGACGGTCTG
CCCGGCCCTGCCTGCCCCTTGCCTTGCATGTCTCCCCTCGGCTCTGCGCGACGTGAGCGACCCC
GCTCACCCAAGCACCCCATTCCCGCCCTGAGTGTGGTGGTGAGTGGGGCGGGCGCCAGCCCTCC
CGCGGGGACACACAGAGACTGCGGGACGTCCTCCGGGCTTCCCGCACACGCAGCGCACCTGTCC
AGGGGCCACGGGCTGGGCGAGCCTCGGTGCGGGGAGCGCCCACCCCCTTGGATGCCTCTGGCCG
CAGGGCTTGCGGCTCGTGCCTCAGCCGGATGCCGTCTCCACACCGGCTTGCCCAGGCGTGAGTC
TGTGCCCCATTCTGTGGCAGCAGCCCGTGTCCCCAGGATGACCCCAGCCCGCGATGGCCGGACG
CCACTCTTGTCCCTTGCTCCTGAGCAGCGCGTGGGAGCAGGGGGCCCACTGCAGGAACGAGCTC
TCTGCCGTGTGTCTCGACCTCCTGGCTCTGCACTTCCCCCACTGCCTCCGCAGGGCCGAGTCCC
CGGGTGGCCGGGCCTGGGTCTCGGCATCACAGGGCCAGTCAGGTGGTGGCCGGGTGGCCATCCT
GGGAAGTGGCTGTGCTGCCAGAGCTAGGAGCCCGCACCCCGTGCCACAGGACTTGCTGGGGGAG
CCACGTGTGCCCCTGCCTGGGAGGAACCTGGGCCCCAGCGTTTGTCTCACAGTGTAGGGGGGTG
GGGGGTGGGGACGTGGGCTGGGGGGTCCTACCTCCTAGGGAGGGAGGGACAAGGCAGGTGCCAC
GGCGCTGTCTGTAAGTGCGTGTGAGGGTGTGTGTGATGTGTGTGTGTGCATGCGTGTGGGTCTG
CATGGGGAGGGTGTGTGAGCGTCTGAATGTGTTAACTGCACACACGAGTGCAGTTCTTTGTGAG
TGCCTATGTACGAGTGTGAGTGTGCATGTGCACATAAGCACGCACATGTACAAGTGTGGGAGCG
AGCTGTGTGAGCATGCATGTCCACGGGTGTGAGTGTGAGCATGAGTGGGCATGAGAATGTGAGT
GCATATGAGCCTGAGTGGAAATGTGTGCATGTGCAATGGGAGTATGAGTGTGTATGTGTGAGTG
TGTGTGCAGCGGAAGGTGTGAGCAGAGCTCTGTATCTCCACCCACGGGGGTGCCCCCAGTGCCC
CGGCACCCCAACGAGGGGATGCCTTCCCATCTGATGTGTGCACAGCACCGAGGCCCCCAGAGGG
CACAACCCCATCCACACATCATCCGGAGGGGGAGCTGGGGTAGGGAACTGGGACCAGAGCTCAG
TGGTGAGCAACCTGGGGCTGCTTGGCTATGGGTCCCCCCTCACAGGGCTCCCCGACTTCTGCAT
CCGCACACAGTCCTCCGAGTACTGTCCAGGAGCGGGGCCCCCTTCCCCGGGCTCAGTGAGCCAT
TCTGCTTTCCCGGGCTCACCGTCCTGCTGCCCCCACCCTCCAGGGAAGGAGAGACCCGGCGCCC
CCCGTCCATGCCTCGTGCTGCCAGAGGCCGGTTTGGTCTCCCAGATGGGGGGCACAGGATGTCC
GGAGGCCACGGATCTGGGTCTGGACTGAGGCGCTGAGTAGGGCAGGCAGCCTGGGCCAGGGAAG
GGGGCCCGCAGGTCGCCTGTGCGGATGCTGCTCGGCTGGTGCCTGTCCGTGGAGATCCGGGCGT
GTGGATGAGGCTCCTGGTGTCTCAGAGGCACTCGGCCGAGGACGCCAGGCAGAGCCGCTGGGTC
CTTGCGGGACTTGTTTTGGCATAACTGAGGCCCCCAGCAGATCGGGTCTCACCCCAGCCCTCAT
GCACAGGCTGTGGGGACTCTCCAGTCCCCGAGAGCTCCGGTCTGTTCCCAGCCACCAGCCAGGC
CCCGGGAAGGAGGAGCAGGGGCAGGACGTGGGCTTCTGGAGCCGAGGGTCCCCGGCAGGCTGGG
GTCTGCCCTGGCAGCTGCCACTCATGGGTTGTTCGGAGCCGGCCTGGGGCAGCCCCTTGCTCAG
GCTGGCAGGGACGTCACCTACATGTCACTTGCAGAGCGGGGTGGTCACTGGCACAGGCCTGTCC
CAGGCTGGGGGTACCCGGCACCTCCCGACGTCCGTGCCCGGGGCTGCCGGGAAGGGACAGCTGA
GCCCCTGGATGCGTAGTGGGACTGAGCTGTGTGCCCTGCAGCGGGCGGGGGACGGGGGCCCCGG
GGCAGGACAGGAAAGGCAGGGGCCCCCCCAGGCTTCCTGAGAGGGCCACGGGATCGCCTCTGGG
GTGCCTTGCTTCTCCCAGCTGGGGGCGGCCGCGCGGCTTTAATTCTGCTGAGGAAATCCACAGT
AGCGAGTCTTCCCCTTAAATGTATGTTTGTCAAAGTCAAAATAAACACAGAGGTCCTGA

hide sequence

RefSeq Acc Id:

XM_038484372 ⟹ XP_038340300

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	8	72,142,070 - 72,151,068 (-)	NCBI

RefSeq Acc Id:

XM_038545888 ⟹ XP_038401816

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	8	72,578,600 - 72,589,912 (-)	NCBI

RefSeq Acc Id:

XM_038545889 ⟹ XP_038401817

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	8	72,578,600 - 72,596,714 (-)	NCBI

RefSeq Acc Id:

XM_038545890 ⟹ XP_038401818

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	8	72,578,600 - 72,596,714 (-)	NCBI

RefSeq Acc Id:

XM_038545891 ⟹ XP_038401819

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	8	72,578,600 - 72,596,714 (-)	NCBI

RefSeq Acc Id:

XM_038545892 ⟹ XP_038401820

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	8	72,578,600 - 72,590,288 (-)	NCBI

RefSeq Acc Id:

XM_038596781 ⟹ XP_038452709

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	8	71,684,182 - 71,702,232 (-)	NCBI

RefSeq Acc Id:

XM_038596785 ⟹ XP_038452713

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	8	71,684,182 - 71,702,232 (-)	NCBI

RefSeq Acc Id:

XM_038596791 ⟹ XP_038452719

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	8	71,684,182 - 71,695,852 (-)	NCBI

RefSeq Acc Id:

XM_038609954 ⟹ XP_038465882

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	8	72,179,187 - 72,190,501 (-)	NCBI

RefSeq Acc Id:

XM_038609955 ⟹ XP_038465883

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	8	72,179,187 - 72,197,260 (-)	NCBI

RefSeq Acc Id:

XM_038609956 ⟹ XP_038465884

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	8	72,179,187 - 72,197,260 (-)	NCBI

RefSeq Acc Id:

XM_038609957 ⟹ XP_038465885

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	8	72,179,187 - 72,190,899 (-)	NCBI

RefSeq Acc Id:

XM_038674796 ⟹ XP_038530724

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	8	72,453,248 - 72,464,564 (-)	NCBI

RefSeq Acc Id:

XM_038674797 ⟹ XP_038530725

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	8	72,453,248 - 72,471,387 (-)	NCBI

RefSeq Acc Id:

XM_038674798 ⟹ XP_038530726

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	8	72,453,248 - 72,471,387 (-)	NCBI

RefSeq Acc Id:

XM_038674799 ⟹ XP_038530727

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	8	72,453,248 - 72,464,927 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_022278129	(Get FASTA)	NCBI Sequence Viewer
	XP_038340300	(Get FASTA)	NCBI Sequence Viewer
	XP_038401816	(Get FASTA)	NCBI Sequence Viewer
	XP_038401817	(Get FASTA)	NCBI Sequence Viewer
	XP_038401818	(Get FASTA)	NCBI Sequence Viewer
	XP_038401819	(Get FASTA)	NCBI Sequence Viewer
	XP_038401820	(Get FASTA)	NCBI Sequence Viewer
	XP_038452709	(Get FASTA)	NCBI Sequence Viewer
	XP_038452713	(Get FASTA)	NCBI Sequence Viewer
	XP_038452719	(Get FASTA)	NCBI Sequence Viewer
	XP_038465882	(Get FASTA)	NCBI Sequence Viewer
	XP_038465883	(Get FASTA)	NCBI Sequence Viewer
	XP_038465884	(Get FASTA)	NCBI Sequence Viewer
	XP_038465885	(Get FASTA)	NCBI Sequence Viewer
	XP_038530724	(Get FASTA)	NCBI Sequence Viewer
	XP_038530725	(Get FASTA)	NCBI Sequence Viewer
	XP_038530726	(Get FASTA)	NCBI Sequence Viewer
	XP_038530727	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000070739.1
	ENSCAFP00030009641.1
	ENSCAFP00040024174.1
	ENSCAFP00845029691
	ENSCAFP00845029691.1

RefSeq Acc Id:	XP_022278129 ⟸ XM_022422421
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0MHA4 (UniProtKB/TrEMBL), A0A8I3P892 (UniProtKB/TrEMBL), A0A8C0SQR3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MWLSANLTVQERERFTVQEWGPPAACRFSLLASLLSLLLAAAHAWRTLFFLCKGHEGSFLYAFL NLLVSASVVFLVFIASTIVSVGFTMWCDAITEKGTVPHSCEELQDINLELNVDNSAFYDQFAIA QFGLWASWLAWLAITILAFLKVYHNYRQEDLLDNLVHEKELLLARPTPRASFQEEKSAVI hide sequence

RefSeq Acc Id:

ENSCAFP00000027074 ⟸ ENSCAFT00000029115

RefSeq Acc Id:	XP_038340300 ⟸ XM_038484372
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038465884 ⟸ XM_038609956
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038465883 ⟸ XM_038609955
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038465885 ⟸ XM_038609957
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038465882 ⟸ XM_038609954
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038530726 ⟸ XM_038674798
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0SQR3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038530725 ⟸ XM_038674797
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0SQR3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038530727 ⟸ XM_038674799
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0SQR3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038530724 ⟸ XM_038674796
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0MHA4 (UniProtKB/TrEMBL), A0A8I3P892 (UniProtKB/TrEMBL), A0A8C0SQR3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038452713 ⟸ XM_038596785
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0SQR3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038452709 ⟸ XM_038596781
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0SQR3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038452719 ⟸ XM_038596791
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0SQR3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038401819 ⟸ XM_038545891
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0SQR3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038401818 ⟸ XM_038545890
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0SQR3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038401817 ⟸ XM_038545889
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0SQR3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038401820 ⟸ XM_038545892
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0SQR3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038401816 ⟸ XM_038545888
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0MHA4 (UniProtKB/TrEMBL), A0A8C0SQR3 (UniProtKB/TrEMBL), A0A8I3P892 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845029691 ⟸ ENSCAFT00845037892

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000018329	Ensembl
	ENSCAFG00000057782	UniProtKB/TrEMBL
	ENSCAFG00030006008	UniProtKB/TrEMBL
	ENSCAFG00040015089	UniProtKB/TrEMBL
	ENSCAFG00845021480	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000107743.1	UniProtKB/TrEMBL
	ENSCAFT00030011026.1	UniProtKB/TrEMBL
	ENSCAFT00040027834.1	UniProtKB/TrEMBL
	ENSCAFT00845037892	ENTREZGENE
	ENSCAFT00845037892.1	UniProtKB/TrEMBL
InterPro	TMEM179	UniProtKB/TrEMBL
NCBI Gene	TMEM179	ENTREZGENE
PANTHER	PTHR31872	UniProtKB/TrEMBL
	TRANSMEMBRANE PROTEIN 179	UniProtKB/TrEMBL
UniProt	A0A8C0MHA4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0SQR3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3P892	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:49751	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2021-01-14	TMEM179	transmembrane protein 179	LOC106559206	uncharacterized LOC106559206	Data merged from RGD:12092583	737654	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar