LOC100684414 (zinc finger protein 780A-like) - Rat Genome Database

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Gene: LOC100684414 (zinc finger protein 780A-like) Canis lupus familiaris
Analyze
Symbol: LOC100684414
Name: zinc finger protein 780A-like
RGD ID: 12148263
Description: ENCODES a protein that exhibits DNA binding (inferred); DNA-binding transcription activator activity, RNA polymerase II-specific (inferred); metal ion binding (inferred); INVOLVED IN positive regulation of transcription by RNA polymerase II (inferred); regulation of DNA-templated transcription (inferred); regulation of transcription by RNA polymerase II (inferred); ASSOCIATED WITH Carpenter Syndrome 2 (ortholog); congenital hypoplastic anemia (ortholog); craniosynostosis (ortholog); FOUND IN nucleus (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11113,506,667 - 113,528,250 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1112,910,244 - 112,931,855 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01114,106,692 - 114,128,258 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.11113,665,907 - 113,687,428 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01113,298,590 - 113,320,186 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01114,292,723 - 114,314,248 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
nucleus  (IEA)

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
LOC100684414
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11113,506,667 - 113,528,250 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1112,910,244 - 112,931,855 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01114,106,692 - 114,128,258 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.11113,665,907 - 113,687,428 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01113,298,590 - 113,320,186 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01114,292,723 - 114,314,248 (+)NCBIUU_Cfam_GSD_1.0
ZNF780B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381940,028,260 - 40,056,231 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1940,028,260 - 40,056,231 (-)EnsemblGRCh38hg38GRCh38
GRCh371940,534,167 - 40,562,138 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361945,232,104 - 45,248,079 (-)NCBINCBI36Build 36hg18NCBI36
Celera1937,332,535 - 37,360,483 (-)NCBICelera
Cytogenetic Map19q13.2NCBI
HuRef1936,970,631 - 36,998,579 (-)NCBIHuRef
CHM1_11940,534,210 - 40,562,158 (-)NCBICHM1_1
T2T-CHM13v2.01942,848,466 - 42,876,439 (-)NCBIT2T-CHM13v2.0
Zfp780b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39727,658,560 - 27,678,768 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl727,658,560 - 27,678,596 (-)EnsemblGRCm39 Ensembl
GRCm38727,959,135 - 27,979,336 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl727,959,135 - 27,979,171 (-)EnsemblGRCm38mm10GRCm38
MGSCv37728,744,819 - 28,764,176 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36727,667,752 - 27,687,930 (-)NCBIMGSCv36mm8
Celera722,535,097 - 22,554,454 (-)NCBICelera
Cytogenetic Map7A3NCBI
cM Map715.97NCBI
Zfp780b-ps1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8192,374,686 - 92,395,951 (-)NCBIGRCr8
mRatBN7.2183,247,793 - 83,265,406 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl183,244,124 - 83,268,168 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0184,878,906 - 84,896,554 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl184,879,973 - 84,894,805 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0186,096,156 - 86,116,534 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4183,016,772 - 83,062,444 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera177,647,540 - 77,665,169 (-)NCBICelera
Cytogenetic Map1q21NCBI

Variants

.
Variants in LOC100684414
346 total Variants

Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005616571 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022425677 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022425680 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022425683 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022425684 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022425685 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022425686 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022425689 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022425694 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022425697 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022425701 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038450986 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038451336 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038451339 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038451398 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038451543 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038468136 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038468137 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038468138 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038468139 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038468140 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038468141 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038468142 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038468143 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038468144 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038468145 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038468146 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038528885 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038528886 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038528887 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038528888 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038528889 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038528890 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038528891 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038528892 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038528894 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038528895 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038528896 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038593154 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038593155 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038593156 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038593157 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038593158 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038593159 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038593160 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038593161 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038593162 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038593163 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038593164 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038593165 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038656980 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038656982 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038656983 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038656984 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038656985 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038656986 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038656987 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038656988 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038656989 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038656990 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038656991 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038656993 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000010 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000354 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XM_005616571   ⟹   XP_005616628
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11113,506,668 - 113,528,250 (+)NCBI
Dog10K_Boxer_Tasha1112,910,246 - 112,931,855 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022425680   ⟹   XP_022281388
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11113,507,059 - 113,528,250 (+)NCBI
Dog10K_Boxer_Tasha1112,910,578 - 112,931,855 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022425684   ⟹   XP_022281392
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11113,506,670 - 113,528,250 (+)NCBI
Dog10K_Boxer_Tasha1112,910,246 - 112,931,855 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022425685   ⟹   XP_022281393
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11113,509,731 - 113,528,250 (+)NCBI
Dog10K_Boxer_Tasha1112,910,245 - 112,931,855 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022425689   ⟹   XP_022281397
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11113,506,667 - 113,528,250 (+)NCBI
Dog10K_Boxer_Tasha1112,910,245 - 112,931,855 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022425694   ⟹   XP_022281402
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11113,507,059 - 113,528,250 (+)NCBI
Dog10K_Boxer_Tasha1112,910,578 - 112,931,855 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022425697   ⟹   XP_022281405
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11113,509,730 - 113,528,250 (+)NCBI
Dog10K_Boxer_Tasha1112,913,279 - 112,931,855 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038450986   ⟹   XP_038306914
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1112,910,246 - 112,931,855 (+)NCBI
RefSeq Acc Id: XM_038451336   ⟹   XP_038307264
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1112,910,578 - 112,931,855 (+)NCBI
RefSeq Acc Id: XM_038451339   ⟹   XP_038307267
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1112,910,246 - 112,931,855 (+)NCBI
RefSeq Acc Id: XM_038451398   ⟹   XP_038307326
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1112,910,245 - 112,931,855 (+)NCBI
RefSeq Acc Id: XM_038451543   ⟹   XP_038307471
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1112,910,244 - 112,931,855 (+)NCBI
RefSeq Acc Id: XM_038468136   ⟹   XP_038324064
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11113,665,908 - 113,687,428 (+)NCBI
RefSeq Acc Id: XM_038468137   ⟹   XP_038324065
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11113,665,908 - 113,687,428 (+)NCBI
RefSeq Acc Id: XM_038468138   ⟹   XP_038324066
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11113,666,240 - 113,687,428 (+)NCBI
RefSeq Acc Id: XM_038468139   ⟹   XP_038324067
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11113,665,908 - 113,687,428 (+)NCBI
RefSeq Acc Id: XM_038468140   ⟹   XP_038324068
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11113,665,907 - 113,687,428 (+)NCBI
RefSeq Acc Id: XM_038468141   ⟹   XP_038324069
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11113,665,908 - 113,687,428 (+)NCBI
RefSeq Acc Id: XM_038468142   ⟹   XP_038324070
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11113,665,907 - 113,687,428 (+)NCBI
RefSeq Acc Id: XM_038468143   ⟹   XP_038324071
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11113,665,907 - 113,687,428 (+)NCBI
RefSeq Acc Id: XM_038468144   ⟹   XP_038324072
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11113,668,952 - 113,687,428 (+)NCBI
RefSeq Acc Id: XM_038468145   ⟹   XP_038324073
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11113,666,240 - 113,687,428 (+)NCBI
RefSeq Acc Id: XM_038468146   ⟹   XP_038324074
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11113,665,907 - 113,687,428 (+)NCBI
RefSeq Acc Id: XM_038528885   ⟹   XP_038384813
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01114,292,724 - 114,314,248 (+)NCBI
RefSeq Acc Id: XM_038528886   ⟹   XP_038384814
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01114,292,724 - 114,314,248 (+)NCBI
RefSeq Acc Id: XM_038528887   ⟹   XP_038384815
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01114,293,056 - 114,314,248 (+)NCBI
RefSeq Acc Id: XM_038528888   ⟹   XP_038384816
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01114,292,724 - 114,314,248 (+)NCBI
RefSeq Acc Id: XM_038528889   ⟹   XP_038384817
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01114,292,723 - 114,314,248 (+)NCBI
RefSeq Acc Id: XM_038528890   ⟹   XP_038384818
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01114,292,724 - 114,314,248 (+)NCBI
RefSeq Acc Id: XM_038528891   ⟹   XP_038384819
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01114,292,723 - 114,314,248 (+)NCBI
RefSeq Acc Id: XM_038528892   ⟹   XP_038384820
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01114,292,723 - 114,314,248 (+)NCBI
RefSeq Acc Id: XM_038528894   ⟹   XP_038384822
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01114,292,723 - 114,314,248 (+)NCBI
RefSeq Acc Id: XM_038528895   ⟹   XP_038384823
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01114,293,056 - 114,314,248 (+)NCBI
RefSeq Acc Id: XM_038528896   ⟹   XP_038384824
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01114,292,723 - 114,314,248 (+)NCBI
RefSeq Acc Id: XM_038593154   ⟹   XP_038449082
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01113,298,591 - 113,320,186 (+)NCBI
RefSeq Acc Id: XM_038593155   ⟹   XP_038449083
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01113,298,591 - 113,320,186 (+)NCBI
RefSeq Acc Id: XM_038593156   ⟹   XP_038449084
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01113,298,923 - 113,320,186 (+)NCBI
RefSeq Acc Id: XM_038593157   ⟹   XP_038449085
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01113,298,591 - 113,320,186 (+)NCBI
RefSeq Acc Id: XM_038593158   ⟹   XP_038449086
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01113,298,590 - 113,320,186 (+)NCBI
RefSeq Acc Id: XM_038593159   ⟹   XP_038449087
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01113,298,923 - 113,320,186 (+)NCBI
RefSeq Acc Id: XM_038593160   ⟹   XP_038449088
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01113,298,591 - 113,320,186 (+)NCBI
RefSeq Acc Id: XM_038593161   ⟹   XP_038449089
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01113,298,590 - 113,320,186 (+)NCBI
RefSeq Acc Id: XM_038593162   ⟹   XP_038449090
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01113,298,590 - 113,320,186 (+)NCBI
RefSeq Acc Id: XM_038593163   ⟹   XP_038449091
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01113,301,606 - 113,320,186 (+)NCBI
RefSeq Acc Id: XM_038593164   ⟹   XP_038449092
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01113,298,923 - 113,320,186 (+)NCBI
RefSeq Acc Id: XM_038593165   ⟹   XP_038449093
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01113,298,590 - 113,320,186 (+)NCBI
RefSeq Acc Id: XM_038656980   ⟹   XP_038512908
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01114,106,693 - 114,128,258 (+)NCBI
RefSeq Acc Id: XM_038656982   ⟹   XP_038512910
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01114,106,693 - 114,128,258 (+)NCBI
RefSeq Acc Id: XM_038656983   ⟹   XP_038512911
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01114,107,025 - 114,128,258 (+)NCBI
RefSeq Acc Id: XM_038656984   ⟹   XP_038512912
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01114,106,693 - 114,128,258 (+)NCBI
RefSeq Acc Id: XM_038656985   ⟹   XP_038512913
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01114,106,692 - 114,128,258 (+)NCBI
RefSeq Acc Id: XM_038656986   ⟹   XP_038512914
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01114,107,025 - 114,128,258 (+)NCBI
RefSeq Acc Id: XM_038656987   ⟹   XP_038512915
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01114,106,693 - 114,128,258 (+)NCBI
RefSeq Acc Id: XM_038656988   ⟹   XP_038512916
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01114,106,692 - 114,128,258 (+)NCBI
RefSeq Acc Id: XM_038656989   ⟹   XP_038512917
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01114,106,692 - 114,128,258 (+)NCBI
RefSeq Acc Id: XM_038656990   ⟹   XP_038512918
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01114,109,707 - 114,128,258 (+)NCBI
RefSeq Acc Id: XM_038656991   ⟹   XP_038512919
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01114,107,025 - 114,128,258 (+)NCBI
RefSeq Acc Id: XM_038656993   ⟹   XP_038512921
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01114,106,692 - 114,128,258 (+)NCBI
Protein Sequences
Protein RefSeqs XP_005616628 (Get FASTA)   NCBI Sequence Viewer  
  XP_022281388 (Get FASTA)   NCBI Sequence Viewer  
  XP_022281392 (Get FASTA)   NCBI Sequence Viewer  
  XP_022281393 (Get FASTA)   NCBI Sequence Viewer  
  XP_022281397 (Get FASTA)   NCBI Sequence Viewer  
  XP_022281402 (Get FASTA)   NCBI Sequence Viewer  
  XP_022281405 (Get FASTA)   NCBI Sequence Viewer  
  XP_038306914 (Get FASTA)   NCBI Sequence Viewer  
  XP_038307264 (Get FASTA)   NCBI Sequence Viewer  
  XP_038307267 (Get FASTA)   NCBI Sequence Viewer  
  XP_038307326 (Get FASTA)   NCBI Sequence Viewer  
  XP_038307471 (Get FASTA)   NCBI Sequence Viewer  
  XP_038324064 (Get FASTA)   NCBI Sequence Viewer  
  XP_038324065 (Get FASTA)   NCBI Sequence Viewer  
  XP_038324066 (Get FASTA)   NCBI Sequence Viewer  
  XP_038324067 (Get FASTA)   NCBI Sequence Viewer  
  XP_038324068 (Get FASTA)   NCBI Sequence Viewer  
  XP_038324069 (Get FASTA)   NCBI Sequence Viewer  
  XP_038324070 (Get FASTA)   NCBI Sequence Viewer  
  XP_038324071 (Get FASTA)   NCBI Sequence Viewer  
  XP_038324072 (Get FASTA)   NCBI Sequence Viewer  
  XP_038324073 (Get FASTA)   NCBI Sequence Viewer  
  XP_038324074 (Get FASTA)   NCBI Sequence Viewer  
  XP_038384813 (Get FASTA)   NCBI Sequence Viewer  
  XP_038384814 (Get FASTA)   NCBI Sequence Viewer  
  XP_038384815 (Get FASTA)   NCBI Sequence Viewer  
  XP_038384816 (Get FASTA)   NCBI Sequence Viewer  
  XP_038384817 (Get FASTA)   NCBI Sequence Viewer  
  XP_038384818 (Get FASTA)   NCBI Sequence Viewer  
  XP_038384819 (Get FASTA)   NCBI Sequence Viewer  
  XP_038384820 (Get FASTA)   NCBI Sequence Viewer  
  XP_038384822 (Get FASTA)   NCBI Sequence Viewer  
  XP_038384823 (Get FASTA)   NCBI Sequence Viewer  
  XP_038384824 (Get FASTA)   NCBI Sequence Viewer  
  XP_038449082 (Get FASTA)   NCBI Sequence Viewer  
  XP_038449083 (Get FASTA)   NCBI Sequence Viewer  
  XP_038449084 (Get FASTA)   NCBI Sequence Viewer  
  XP_038449085 (Get FASTA)   NCBI Sequence Viewer  
  XP_038449086 (Get FASTA)   NCBI Sequence Viewer  
  XP_038449087 (Get FASTA)   NCBI Sequence Viewer  
  XP_038449088 (Get FASTA)   NCBI Sequence Viewer  
  XP_038449089 (Get FASTA)   NCBI Sequence Viewer  
  XP_038449090 (Get FASTA)   NCBI Sequence Viewer  
  XP_038449091 (Get FASTA)   NCBI Sequence Viewer  
  XP_038449092 (Get FASTA)   NCBI Sequence Viewer  
  XP_038449093 (Get FASTA)   NCBI Sequence Viewer  
  XP_038512908 (Get FASTA)   NCBI Sequence Viewer  
  XP_038512910 (Get FASTA)   NCBI Sequence Viewer  
  XP_038512911 (Get FASTA)   NCBI Sequence Viewer  
  XP_038512912 (Get FASTA)   NCBI Sequence Viewer  
  XP_038512913 (Get FASTA)   NCBI Sequence Viewer  
  XP_038512914 (Get FASTA)   NCBI Sequence Viewer  
  XP_038512915 (Get FASTA)   NCBI Sequence Viewer  
  XP_038512916 (Get FASTA)   NCBI Sequence Viewer  
  XP_038512917 (Get FASTA)   NCBI Sequence Viewer  
  XP_038512918 (Get FASTA)   NCBI Sequence Viewer  
  XP_038512919 (Get FASTA)   NCBI Sequence Viewer  
  XP_038512921 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000067079.1
  ENSCAFP00845005797.1
RefSeq Acc Id: XP_005616628   ⟸   XM_005616571
- Peptide Label: isoform X1
- UniProtKB: J9NZ10 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022281397   ⟸   XM_022425689
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_022281392   ⟸   XM_022425684
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_022281388   ⟸   XM_022425680
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_022281402   ⟸   XM_022425694
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_022281405   ⟸   XM_022425697
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_022281393   ⟸   XM_022425685
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_038324071   ⟸   XM_038468143
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038324068   ⟸   XM_038468140
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038324070   ⟸   XM_038468142
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038324074   ⟸   XM_038468146
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038324065   ⟸   XM_038468137
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038324064   ⟸   XM_038468136
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038324069   ⟸   XM_038468141
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038324067   ⟸   XM_038468139
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038324066   ⟸   XM_038468138
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038324073   ⟸   XM_038468145
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038324072   ⟸   XM_038468144
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038449090   ⟸   XM_038593162
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038449086   ⟸   XM_038593158
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038449089   ⟸   XM_038593161
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038449093   ⟸   XM_038593165
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038449083   ⟸   XM_038593155
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038449082   ⟸   XM_038593154
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038449088   ⟸   XM_038593160
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038449085   ⟸   XM_038593157
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038449087   ⟸   XM_038593159
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038449084   ⟸   XM_038593156
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038449092   ⟸   XM_038593164
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038449091   ⟸   XM_038593163
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038512917   ⟸   XM_038656989
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038512913   ⟸   XM_038656985
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038512916   ⟸   XM_038656988
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038512921   ⟸   XM_038656993
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038512910   ⟸   XM_038656982
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038512908   ⟸   XM_038656980
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038512915   ⟸   XM_038656987
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038512912   ⟸   XM_038656984
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038512914   ⟸   XM_038656986
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038512911   ⟸   XM_038656983
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038512919   ⟸   XM_038656991
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038512918   ⟸   XM_038656990
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038307471   ⟸   XM_038451543
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038307326   ⟸   XM_038451398
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038306914   ⟸   XM_038450986
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038307267   ⟸   XM_038451339
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038307264   ⟸   XM_038451336
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038384820   ⟸   XM_038528892
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038384817   ⟸   XM_038528889
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038384822   ⟸   XM_038528894
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038384819   ⟸   XM_038528891
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038384824   ⟸   XM_038528896
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038384814   ⟸   XM_038528886
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038384813   ⟸   XM_038528885
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038384818   ⟸   XM_038528890
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038384816   ⟸   XM_038528888
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038384815   ⟸   XM_038528887
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038384823   ⟸   XM_038528895
- Peptide Label: isoform X3
Protein Domains
C2H2-type   KRAB


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000032613 UniProtKB/TrEMBL
  ENSCAFG00845004058 UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000044877.3 UniProtKB/TrEMBL
  ENSCAFT00845007299.1 UniProtKB/TrEMBL
Gene3D-CATH 6.10.140.140 UniProtKB/TrEMBL
  Classic Zinc Finger UniProtKB/TrEMBL
InterPro KRAB UniProtKB/TrEMBL
  KRAB_dom_sf UniProtKB/TrEMBL
  Znf_C2H2_sf UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/TrEMBL
NCBI Gene LOC100684414 ENTREZGENE
PANTHER ZINC FINGER PROTEIN UniProtKB/TrEMBL
  ZINC FINGER PROTEIN 594-RELATED UniProtKB/TrEMBL
Pfam KRAB UniProtKB/TrEMBL
  zf-C2H2 UniProtKB/TrEMBL
PROSITE KRAB UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
SMART KRAB UniProtKB/TrEMBL
  ZnF_C2H2 UniProtKB/TrEMBL
Superfamily-SCOP SSF109640 UniProtKB/TrEMBL
  SSF57667 UniProtKB/TrEMBL
UniProt A0A8I3MV08_CANLF UniProtKB/TrEMBL
  A0A8P0PFW0_CANLF UniProtKB/TrEMBL
  J9NZ10 ENTREZGENE