MRPL10 (mitochondrial ribosomal protein L10)

Advanced Search (OLGA)

Gene: MRPL10 (mitochondrial ribosomal protein L10) Pan paniscus

Analyze

Symbol:

MRPL10

Name:

mitochondrial ribosomal protein L10

RGD ID:

11968877

Description:

ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); FOUND IN mitochondrial large ribosomal subunit (inferred); mitochondrion (inferred); nucleoplasm (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

39S ribosomal protein L10, mitochondrial; large ribosomal subunit protein uL10m

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	17,271,567 - 17,279,706 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	19,237,156 - 19,245,299 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	9,705,709 - 9,713,844 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	9,887,855 - 9,895,969 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	9,887,855 - 9,895,969 (+)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

hereditary breast ovarian cancer syndrome (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

mitochondrial large ribosomal subunit (IEA)

mitochondrion (IEA)

nucleoplasm (IEA)

ribonucleoprotein complex (IEA)

ribosome (IEA)

Molecular Function

protein binding (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

MRPL10
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	17,271,567 - 17,279,706 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	19,237,156 - 19,245,299 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	9,705,709 - 9,713,844 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	9,887,855 - 9,895,969 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	9,887,855 - 9,895,969 (+)	Ensembl	panpan1.1		panPan2

MRPL10
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	47,823,272 - 47,831,541 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	47,823,272 - 47,831,541 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	45,900,638 - 45,908,907 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	43,255,637 - 43,263,902 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	17	43,255,637 - 43,263,902	NCBI
Celera	17	42,353,443 - 42,361,707 (-)	NCBI		Celera
Cytogenetic Map	17	q21.32	NCBI
HuRef	17	41,269,550 - 41,277,826 (-)	NCBI		HuRef
CHM1_1	17	45,965,594 - 45,973,847 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	17	48,685,040 - 48,693,314 (-)	NCBI		T2T-CHM13v2.0

Mrpl10
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	96,932,408 - 96,940,039 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	96,932,386 - 96,940,039 (+)	Ensembl		GRCm39 Ensembl
GRCm38	11	97,041,582 - 97,049,213 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	97,041,560 - 97,049,213 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	96,902,900 - 96,910,527 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	96,857,676 - 96,865,303 (+)	NCBI		MGSCv36	mm8
Celera	11	106,693,044 - 106,700,671 (+)	NCBI		Celera
Cytogenetic Map	11	D	NCBI
cM Map	11	60.69	NCBI

Mrpl10
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	82,522,470 - 82,530,886 (+)	NCBI		GRCr8
mRatBN7.2	10	82,026,031 - 82,034,451 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	82,026,031 - 82,034,443 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	86,974,104 - 86,982,361 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	86,472,154 - 86,480,411 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	81,864,737 - 81,872,994 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	84,976,377 - 84,984,793 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	84,976,377 - 84,984,780 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	84,766,862 - 84,775,278 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	85,761,934 - 85,770,350 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	10	80,787,382 - 80,795,760 (+)	NCBI		Celera
Cytogenetic Map	10	q31	NCBI

Mrpl10
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955451	13,281,935 - 13,288,033 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955451	13,281,935 - 13,288,033 (+)	NCBI	ChiLan1.0	ChiLan1.0

MRPL10
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	24,156,825 - 24,162,754 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	24,156,555 - 24,163,336 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	23,624,854 - 23,630,783 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	24,951,849 - 24,957,778 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	24,951,852 - 24,958,146 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	23,721,989 - 23,727,918 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	23,982,823 - 23,988,743 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	24,109,493 - 24,115,425 (-)	NCBI		UU_Cfam_GSD_1.0

Mrpl10
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	23,585,923 - 23,594,119 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936490	13,481,097 - 13,489,216 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936490	13,481,082 - 13,489,221 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MRPL10
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	24,075,632 - 24,083,052 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	24,076,484 - 24,083,086 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	23,954,339 - 23,960,936 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MRPL10
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	68,224,300 - 68,232,020 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	16	68,223,846 - 68,231,989 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666077	39,274,833 - 39,282,682 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Mrpl10
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624795	4,479,728 - 4,487,366 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624795	4,481,270 - 4,487,423 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003827480	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034941537	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034941538	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000019	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSPPAT00000045323 ⟹ ENSPPAP00000022513

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	17	9,887,855 - 9,895,969 (+)	Ensembl

RefSeq Acc Id:

XM_003827480 ⟹ XP_003827528

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	19	17,271,567 - 17,279,706 (+)	NCBI
NHGRI_mPanPan1	17	19,237,156 - 19,245,299 (+)	NCBI
Mhudiblu_PPA_v0	17	9,705,709 - 9,713,844 (+)	NCBI
PanPan1.1	17	9,887,855 - 9,895,969 (+)	NCBI

Sequence:

show sequence

GCTTCCGTCCATTCTTCCGGTGGAGATGGCTGCGGCCGTGGCGGGGATGCTGCGAGGGGGTCTC
CTTCCCCAGGCGGGCCGGCTGCCTACCCTCCAGACTGTCCGCTATGGCTCCAAGGCTGTTACCC
GCCACCGTCGTGTGATGCACTTTCAGCGGCAGAAGCTGATGGCTGTGACTGAATATATCCCCCC
GAAACCAGCCATCCACCCATCATGCCTGCCATCTCCTCCCAGCCCCCCACAGGAGGAGATAGGC
CTCATCAGGCTTCTCCGCCGGGAGATAGCAGCAGTTTTCCAGGACAACCGAATGATAGCCGTCT
GCCAGAATGTGGCTCTGAGTGCAGAGGACAAGCTTCTTATGCGACACCAGCTGCGGAAACACAA
GATCCTGATGAAGGTCTTCCCCAACCAGGTCCTGAAGCCCTTCCTGGAGGATTCCAAGTACCAA
AATCTGCTGCCCCTTTTTGTGGGGCACAACATGCTGCTGGTCAGTGAAGAGCCCAAGGTCAAGG
AGATGGTACGGATCTTAAGGACTGTGCCATTCCTGCCGCTGCTAGGTGGCTGCATTGATGACAC
CATCCTCAGCAGGCAGGGCTTTATCAACTACTCCAAGCTCCCCAGCCTGCCCCTGGTGCAGGGG
GAGCTTGTAGGAGGCCTCACCTGCCTCACAGCCCAGACACACTCCCTGCTCCAGCACCAGCCCC
TCCAGCTGACCACCCTGTTGGACCAGTACATCAGAGAGCAACGCGAGAAGGATTCTGTCATGTC
GGCCAATGGGAAGCCAGATCCTGACCCTGTTCCGGACTCGTAGCCAGCCTGTTTAGCCAGCCCT
GCGCATAAATACACTCTGCGCTATTGGCTGTGCTCTCCTCCATGGGAGATGTGGAAGAACTTGG
GGTCGGGGAGTGCGTTTGTCACTTGGTTTTCACTAGTAATGATATTGTCAGGTATAGGGCCACT
TGGAGATGCAGAGGATTCCATTTCAGATGTCAGTCACCGGCTTCGTCCTTAGTTTTCCCAACTT
GGGACCTGATAGGAGCAAAGTCTCTCCATTCTCCAGGTCCAAGGCAGAGATCCTGAAAAGATAG
GGCTATTGTCCCCTGCCTCCTTGGTCACTGCCTCTTGCTGCACGGGCTCCTGAGCCCACCCCCT
TGGGGCACAACCTGCCACTGCCACAGTAGCTCAACCAAGCAGTTGTGCTGAGAATGGCACCTGG
TGAGAGCCTGCTGTGTGCCAGGCTTTGTGCTGAGTGCTGTACATGTATTAGTTCCTTTACTCCT
GACCACATTGTACCCATTTCACAGAGAAGGAGCAGAGAAATTAAGTGGCTTGCTCAAGGTCATG
CAGTTAGTAAGTGGCAGAACAGGGACTTGAACCAAGCCCTCTGCTCTGAAGACCGCGTCCTGAA
TTTCTACACTAGAGCTTCCTCATCAGGTTACCTAGAAGTGGGTCCCATCCACCATCCAGGTGTG
CTTGGATGTTAGTTCTCCACCCTCGAGGTGTACGCTGTGAAAAGTTTGGGAGCACTGCTTTATA
ATAAAATGAAATATATTCTACTTCCTTTA

hide sequence

RefSeq Acc Id:

XM_034941537 ⟹ XP_034797428

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	19	17,273,910 - 17,279,706 (+)	NCBI
NHGRI_mPanPan1	17	19,239,498 - 19,245,299 (+)	NCBI
Mhudiblu_PPA_v0	17	9,708,067 - 9,713,844 (+)	NCBI

RefSeq Acc Id:

XM_034941538 ⟹ XP_034797429

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	19	17,271,711 - 17,279,706 (+)	NCBI
NHGRI_mPanPan1	17	19,237,300 - 19,245,299 (+)	NCBI
Mhudiblu_PPA_v0	17	9,705,762 - 9,713,844 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_003827528	(Get FASTA)	NCBI Sequence Viewer
	XP_034797428	(Get FASTA)	NCBI Sequence Viewer
	XP_034797429	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000022513
	ENSPPAP00000022513.1

RefSeq Acc Id:	XP_003827528 ⟸ XM_003827480
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R9B000 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAAAVAGMLRGGLLPQAGRLPTLQTVRYGSKAVTRHRRVMHFQRQKLMAVTEYIPPKPAIHPSC LPSPPSPPQEEIGLIRLLRREIAAVFQDNRMIAVCQNVALSAEDKLLMRHQLRKHKILMKVFPN QVLKPFLEDSKYQNLLPLFVGHNMLLVSEEPKVKEMVRILRTVPFLPLLGGCIDDTILSRQGFI NYSKLPSLPLVQGELVGGLTCLTAQTHSLLQHQPLQLTTLLDQYIREQREKDSVMSANGKPDPD PVPDS hide sequence

RefSeq Acc Id:	XP_034797429 ⟸ XM_034941538
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_034797428 ⟸ XM_034941537
- Peptide Label:	isoform X1

Ensembl Acc Id:

ENSPPAP00000022513 ⟸ ENSPPAT00000045323

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000034452	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000045323.1	UniProtKB/TrEMBL
Gene3D-CATH	3.30.70.1730	UniProtKB/TrEMBL
InterPro	Ribosomal_L10-like_sf	UniProtKB/TrEMBL
	Ribosomal_L10P	UniProtKB/TrEMBL
	Ribosomal_uL10_bac_type	UniProtKB/TrEMBL
KEGG Report	pps:100984860	UniProtKB/TrEMBL
NCBI Gene	MRPL10	ENTREZGENE
PANTHER	39S RIBOSOMAL PROTEIN L10, MITOCHONDRIAL	UniProtKB/TrEMBL
	PTHR11560	UniProtKB/TrEMBL
Pfam	Ribosomal_L10	UniProtKB/TrEMBL
Superfamily-SCOP	SSF160369	UniProtKB/TrEMBL
UniProt	A0A2R9B000	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message

Imported Disease Annotations - ClinVar