LOC100977815 (olfactory receptor 2A5) - Rat Genome Database

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Gene: LOC100977815 (olfactory receptor 2A5) Pan paniscus
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Symbol: LOC100977815 (Ensembl: OR2A5)
Name: olfactory receptor 2A5 (Ensembl:olfactory receptor family 2 subfamily A member 5)
RGD ID: 11943951
Description: ENCODES a protein that exhibits G protein-coupled receptor activity (inferred); olfactory receptor activity (inferred); INVOLVED IN detection of chemical stimulus involved in sensory perception of smell (inferred); G protein-coupled receptor signaling pathway (inferred); sensory perception of smell (inferred); FOUND IN membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Dog
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26180,761,492 - 180,770,476 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1732,776,522 - 32,777,457 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v07135,907,481 - 135,908,506 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17148,396,699 - 148,397,699 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7148,396,727 - 148,397,662 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
LOC100977815
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26180,761,492 - 180,770,476 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1732,776,522 - 32,777,457 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v07135,907,481 - 135,908,506 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17148,396,699 - 148,397,699 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7148,396,727 - 148,397,662 (+)Ensemblpanpan1.1panPan2
OR2A5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387144,048,948 - 144,058,845 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl7144,048,948 - 144,058,845 (+)EnsemblGRCh38hg38GRCh38
GRCh377143,746,041 - 143,755,938 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 367143,378,428 - 143,379,363 (+)NCBINCBI36Build 36hg18NCBI36
Build 347143,185,142 - 143,186,078NCBI
Celera7138,380,756 - 138,381,691 (+)NCBICelera
Cytogenetic Map7q35NCBI
HuRef7137,947,020 - 137,947,955 (+)NCBIHuRef
CHM1_17143,684,862 - 143,685,797 (+)NCBICHM1_1
T2T-CHM13v2.07145,329,435 - 145,339,332 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v27143,085,710 - 143,086,645 (+)NCBI
Or2a5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39642,873,387 - 42,874,319 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl642,867,375 - 42,876,019 (+)EnsemblGRCm39 Ensembl
GRCm38642,896,453 - 42,897,385 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl642,890,441 - 42,899,085 (+)EnsemblGRCm38mm10GRCm38
MGSCv37642,846,452 - 42,847,384 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36642,826,060 - 42,826,992 (+)NCBIMGSCv36mm8
Celera642,842,797 - 42,843,729 (+)NCBICelera
Cytogenetic Map6B2.1NCBI
cM Map620.96NCBI
Or2a5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8472,856,094 - 72,857,026 (+)NCBIGRCr8
mRatBN7.2471,856,084 - 71,857,016 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl471,853,931 - 71,858,347 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_WKY_Bbb_1.0471,149,204 - 71,150,136 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0472,480,540 - 72,481,472 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl472,480,540 - 72,481,472 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04137,178,372 - 137,179,304 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4470,795,367 - 70,796,299 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1471,071,496 - 71,072,429 (+)NCBI
Celera466,805,791 - 66,806,723 (+)NCBICelera
Cytogenetic Map4q24NCBI
OR2A5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1165,842,189 - 5,843,121 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl165,842,189 - 5,843,121 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha166,889,741 - 6,890,673 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0165,696,040 - 5,696,972 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl165,696,040 - 5,696,972 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1165,635,960 - 5,636,892 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0165,493,816 - 5,494,748 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0165,563,365 - 5,564,298 (-)NCBIUU_Cfam_GSD_1.0
LOC103227151
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.121112,786,666 - 112,791,526 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660729,538,621 - 9,560,234 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_063606407 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSPPAT00000005946   ⟹   ENSPPAP00000001255
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl7148,396,727 - 148,397,662 (+)Ensembl
RefSeq Acc Id: XM_063606407   ⟹   XP_063462477
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v26180,761,492 - 180,770,476 (+)NCBI
Protein Sequences
Protein RefSeqs XP_063462477 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000001255.1
Ensembl Acc Id: ENSPPAP00000001255   ⟸   ENSPPAT00000005946
RefSeq Acc Id: XP_063462477   ⟸   XM_063606407
- UniProtKB: A0A2R8ZCK4 (UniProtKB/TrEMBL)
Protein Domains
G-protein coupled receptors family 1 profile


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000005477 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000005946.1 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
KEGG Report pps:100977815 UniProtKB/TrEMBL
NCBI Gene LOC100977815 ENTREZGENE
PANTHER OLFACTORY RECEPTOR UniProtKB/TrEMBL
  OLFACTORY RECEPTOR 2A5 UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A2R8ZCK4 ENTREZGENE, UniProtKB/TrEMBL