ANAPC10 (anaphase promoting complex subunit 10) - Rat Genome Database

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Gene: ANAPC10 (anaphase promoting complex subunit 10) Pan paniscus
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Symbol: ANAPC10
Name: anaphase promoting complex subunit 10
RGD ID: 11887401
Description: INVOLVED IN anaphase-promoting complex-dependent catabolic process (inferred); cell division (inferred); protein branched polyubiquitination (inferred); FOUND IN cytoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: anaphase-promoting complex subunit 10
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v23142,520,587 - 142,978,636 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan14142,885,079 - 143,343,539 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v04137,339,959 - 137,445,172 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.14149,001,632 - 149,105,870 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4149,001,637 - 149,105,836 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
ANAPC10
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v23142,520,587 - 142,978,636 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan14142,885,079 - 143,343,539 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v04137,339,959 - 137,445,172 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.14149,001,632 - 149,105,870 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4149,001,637 - 149,105,836 (-)Ensemblpanpan1.1panPan2
ANAPC10
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384144,994,575 - 145,098,571 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl4144,831,908 - 145,098,541 (-)EnsemblGRCh38hg38GRCh38
GRCh374145,915,727 - 146,019,723 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 364146,135,760 - 146,238,818 (-)NCBINCBI36Build 36hg18NCBI36
Build 344146,273,924 - 146,376,946NCBI
Celera4143,243,840 - 143,346,710 (-)NCBICelera
Cytogenetic Map4q31.21NCBI
HuRef4141,646,742 - 141,751,014 (-)NCBIHuRef
CHM1_14145,892,181 - 145,995,963 (-)NCBICHM1_1
T2T-CHM13v2.04148,311,947 - 148,415,963 (-)NCBIT2T-CHM13v2.0
Anapc10
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39880,438,366 - 80,503,950 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl880,438,449 - 80,505,688 (+)EnsemblGRCm39 Ensembl
GRCm38879,711,736 - 79,777,321 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl879,711,820 - 79,779,059 (+)EnsemblGRCm38mm10GRCm38
MGSCv37882,235,719 - 82,301,220 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36882,607,892 - 82,673,393 (+)NCBIMGSCv36mm8
Celera883,987,644 - 84,052,931 (+)NCBICelera
Cytogenetic Map8C1NCBI
cM Map837.79NCBI
Anapc10
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81945,057,278 - 45,109,882 (-)NCBIGRCr8
mRatBN7.21928,152,299 - 28,205,552 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1928,152,299 - 28,205,467 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1935,014,242 - 35,065,885 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01935,668,322 - 35,719,959 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01937,903,067 - 37,954,831 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01931,814,686 - 31,867,928 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1931,815,319 - 31,867,850 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01942,718,773 - 42,771,903 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41930,041,566 - 30,093,688 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11930,045,604 - 30,098,424 (-)NCBI
Celera1927,661,855 - 27,713,603 (-)NCBICelera
Cytogenetic Map19q11NCBI
Anapc10
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955428941,659 - 1,029,799 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955428945,238 - 1,029,818 (-)NCBIChiLan1.0ChiLan1.0
ANAPC10
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11543,528,978 - 43,781,843 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1543,579,151 - 43,781,698 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1544,086,226 - 44,174,246 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01544,362,659 - 44,450,715 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1544,239,361 - 44,450,317 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11543,636,095 - 43,724,071 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01543,722,125 - 43,810,142 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01543,986,781 - 44,074,815 (-)NCBIUU_Cfam_GSD_1.0
Anapc10
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530146,546,939 - 46,623,902 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365353,984,619 - 4,062,413 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365353,984,980 - 4,061,237 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ANAPC10
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl883,353,231 - 83,436,518 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1883,353,217 - 83,497,570 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2888,623,777 - 88,697,521 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ANAPC10
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1791,557,905 - 91,673,235 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl791,554,951 - 91,673,266 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603771,197,541 - 71,313,698 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Anapc10
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248533,992,414 - 4,059,215 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248533,992,351 - 4,059,254 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSPPAT00000044786   ⟹   ENSPPAP00000021981
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl4149,001,637 - 149,105,836 (-)Ensembl
Ensembl Acc Id: ENSPPAT00000044792   ⟹   ENSPPAP00000021987
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl4149,061,561 - 149,103,728 (-)Ensembl
Ensembl Acc Id: ENSPPAT00000044796   ⟹   ENSPPAP00000021991
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl4149,072,145 - 149,103,728 (-)Ensembl
RefSeq Acc Id: XM_008968858   ⟹   XP_008967106
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v23142,873,456 - 142,978,629 (-)NCBI
NHGRI_mPanPan14143,238,305 - 143,343,515 (-)NCBI
Mhudiblu_PPA_v04137,339,959 - 137,445,168 (-)NCBI
PanPan1.14149,001,632 - 149,105,870 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008968859   ⟹   XP_008967107
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v23142,873,456 - 142,978,636 (-)NCBI
NHGRI_mPanPan14143,238,305 - 143,343,539 (-)NCBI
Mhudiblu_PPA_v04137,339,959 - 137,445,171 (-)NCBI
PanPan1.14149,001,632 - 149,105,841 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008968860   ⟹   XP_008967108
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v23142,873,456 - 142,978,629 (-)NCBI
NHGRI_mPanPan14143,238,305 - 143,343,516 (-)NCBI
Mhudiblu_PPA_v04137,339,959 - 137,445,169 (-)NCBI
PanPan1.14149,001,638 - 149,105,870 (-)NCBI
Sequence:
RefSeq Acc Id: XM_014344751   ⟹   XP_014200237
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v23142,873,456 - 142,978,629 (-)NCBI
NHGRI_mPanPan14143,238,305 - 143,343,519 (-)NCBI
Mhudiblu_PPA_v04137,340,798 - 137,445,172 (-)NCBI
PanPan1.14149,001,638 - 149,105,870 (-)NCBI
Sequence:
RefSeq Acc Id: XM_057302172   ⟹   XP_057158155
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v23142,873,456 - 142,978,636 (-)NCBI
NHGRI_mPanPan14143,238,305 - 143,343,520 (-)NCBI
RefSeq Acc Id: XM_063603950   ⟹   XP_063460020
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v23142,873,456 - 142,978,636 (-)NCBI
RefSeq Acc Id: XM_063603951   ⟹   XP_063460021
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v23142,850,795 - 142,978,629 (-)NCBI
RefSeq Acc Id: XR_008625236
Type: NON-CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v23142,520,587 - 142,978,636 (-)NCBI
NHGRI_mPanPan14142,885,079 - 143,343,539 (-)NCBI
RefSeq Acc Id: XR_008625237
Type: NON-CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v23142,707,801 - 142,978,629 (-)NCBI
NHGRI_mPanPan14143,072,609 - 143,343,517 (-)NCBI
RefSeq Acc Id: XR_010112041
Type: NON-CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v23142,707,796 - 142,978,636 (-)NCBI
RefSeq Acc Id: XR_010112042
Type: NON-CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v23142,781,716 - 142,978,629 (-)NCBI
RefSeq Acc Id: XP_008967107   ⟸   XM_008968859
- Peptide Label: isoform X1
- UniProtKB: A0A2R9B1F2 (UniProtKB/TrEMBL),   A0A2R9BYJ0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008967106   ⟸   XM_008968858
- Peptide Label: isoform X1
- UniProtKB: A0A2R9B1F2 (UniProtKB/TrEMBL),   A0A2R9BYJ0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008967108   ⟸   XM_008968860
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_014200237   ⟸   XM_014344751
- Peptide Label: isoform X2
- Sequence:
Ensembl Acc Id: ENSPPAP00000021981   ⟸   ENSPPAT00000044786
Ensembl Acc Id: ENSPPAP00000021987   ⟸   ENSPPAT00000044792
Ensembl Acc Id: ENSPPAP00000021991   ⟸   ENSPPAT00000044796
RefSeq Acc Id: XP_057158155   ⟸   XM_057302172
- Peptide Label: isoform X4
RefSeq Acc Id: XP_063460021   ⟸   XM_063603951
- Peptide Label: isoform X3
- UniProtKB: A0A2R9BYI5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063460020   ⟸   XM_063603950
- Peptide Label: isoform X2
Protein Domains
DOC


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000034191 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSPPAG00000040111 UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000044786.1 UniProtKB/TrEMBL
  ENSPPAT00000044792.1 UniProtKB/TrEMBL
  ENSPPAT00000044796.1 UniProtKB/TrEMBL
  ENSPPAT00000057409.1 UniProtKB/TrEMBL
  ENSPPAT00000057415.1 UniProtKB/TrEMBL
Gene3D-CATH Galactose-binding domain-like UniProtKB/TrEMBL
InterPro APC10/Doc1 UniProtKB/TrEMBL
  APC_su10/DOC_dom UniProtKB/TrEMBL
  Galactose-bd-like_sf UniProtKB/TrEMBL
KEGG Report pps:100990829 UniProtKB/TrEMBL
NCBI Gene ANAPC10 ENTREZGENE
PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 10 UniProtKB/TrEMBL
  ANAPHASE-PROMOTING COMPLEX SUBUNIT 10 UniProtKB/TrEMBL
  PTHR12936 UniProtKB/TrEMBL
Pfam ANAPC10 UniProtKB/TrEMBL
PIRSF APC10_sub UniProtKB/TrEMBL
PROSITE DOC UniProtKB/TrEMBL
SMART APC10 UniProtKB/TrEMBL
Superfamily-SCOP SSF49785 UniProtKB/TrEMBL
UniProt A0A2R9AY00_PANPA UniProtKB/TrEMBL
  A0A2R9B1F2 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9B1G3_PANPA UniProtKB/TrEMBL
  A0A2R9BYI5 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9BYJ0 ENTREZGENE, UniProtKB/TrEMBL