LOC103784877 (elongation factor 1-alpha 1) - Rat Genome Database

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Gene: LOC103784877 (elongation factor 1-alpha 1) Pan paniscus
Analyze
Symbol: LOC103784877
Name: elongation factor 1-alpha 1
RGD ID: 11859807
Description: ENCODES a protein that exhibits GTP binding (inferred); GTPase activity (inferred); translation elongation factor activity (inferred); INVOLVED IN translation (inferred); translational elongation (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: elongation factor 1-alpha 1 pseudogene; elongation factor 1-alpha 1-like; LOC129397778
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2466,828,485 - 66,830,299 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan16119,753,312 - 119,755,030 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0566,876,379 - 66,877,895 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1571,926,229 - 71,927,908 (+)NCBIpanpan1.1PanPan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_055113987   ⟹   XP_054969962
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2466,828,485 - 66,830,299 (+)NCBI
NHGRI_mPanPan16119,753,312 - 119,755,030 (-)NCBI
Protein Sequences
Protein RefSeqs XP_054969962 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000033739.1
RefSeq Acc Id: XP_054969962   ⟸   XM_055113987
- UniProtKB: A0A2R9C5D8 (UniProtKB/TrEMBL)
Protein Domains
tr-type G


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000039681 UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000056616.1 UniProtKB/TrEMBL
Gene3D-CATH P-loop containing nucleotide triphosphate hydrolases UniProtKB/TrEMBL
  Translation factors UniProtKB/TrEMBL
InterPro G_TR_CS UniProtKB/TrEMBL
  GTP-eEF1A_C UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
  T_Tr_GTP-bd_dom UniProtKB/TrEMBL
  TRAFAC_GTPase_members UniProtKB/TrEMBL
  Transl_B-barrel_sf UniProtKB/TrEMBL
  Transl_elong_EF1A/Init_IF2_C UniProtKB/TrEMBL
  Transl_elong_EF1A_euk/arc UniProtKB/TrEMBL
NCBI Gene LOC103784877 ENTREZGENE
PANTHER ELONGATION FACTOR 1-ALPHA UniProtKB/TrEMBL
  TRANSLATION FACTOR UniProtKB/TrEMBL
Pfam GTP-eEF1A_C UniProtKB/TrEMBL
  GTP_EFTU UniProtKB/TrEMBL
PRINTS ELONGATNFCT UniProtKB/TrEMBL
PROSITE G_TR_1 UniProtKB/TrEMBL
  G_TR_2 UniProtKB/TrEMBL
Superfamily-SCOP EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain UniProtKB/TrEMBL
  P-loop containing nucleoside triphosphate hydrolases UniProtKB/TrEMBL
  Translation proteins UniProtKB/TrEMBL
UniProt A0A2R9C5D8 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-03-14 LOC103784877  elongation factor 1-alpha 1  LOC129397778  elongation factor 1-alpha 1-like  Data Merged 737654 PROVISIONAL
2023-04-25 LOC103784877  elongation factor 1-alpha 1  LOC103784877  elongation factor 1-alpha 1-like  Symbol and/or name change 5135510 APPROVED
2020-07-01 LOC103784877  elongation factor 1-alpha 1-like  LOC103784877  elongation factor 1-alpha 1 pseudogene  Symbol and/or name change 5135510 APPROVED