LOC100967910 (elongation factor 1-beta-like) - Rat Genome Database

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Gene: LOC100967910 (elongation factor 1-beta-like) Pan paniscus
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Symbol: LOC100967910
Name: elongation factor 1-beta-like
RGD ID: 11799366
Description: ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (inferred); translation elongation factor activity (inferred); INVOLVED IN translation (inferred); translational elongation (inferred); FOUND IN cytoplasm (inferred); cytosol (inferred); eukaryotic translation elongation factor 1 complex (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: elongation factor 1-beta pseudogene
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X26,583,581 - 26,586,299 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X26,586,988 - 26,589,526 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X17,383,706 - 17,384,451 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X24,750,562 - 24,751,337 (-)NCBIpanpan1.1PanPan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_055106902   ⟹   XP_054962877
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2X26,583,581 - 26,586,299 (-)NCBI
NHGRI_mPanPan1X26,586,988 - 26,589,526 (-)NCBI
Protein Sequences
Protein RefSeqs XP_054962877 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000003667.1
  ENSPPAP00000021077.1
RefSeq Acc Id: XP_054962877   ⟸   XM_055106902
- UniProtKB: A0A2R8ZF86 (UniProtKB/TrEMBL),   A0A2R9AUV0 (UniProtKB/TrEMBL)
Protein Domains
Elongation factor 1 beta central acidic region   Translation elongation factor EF1B beta/delta


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000015413 ENTREZGENE, UniProtKB/TrEMBL
  ENSPPAG00000033754 UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000016888.1 UniProtKB/TrEMBL
  ENSPPAT00000043876.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.1050.130 UniProtKB/TrEMBL
  3.30.70.60 UniProtKB/TrEMBL
InterPro Arc1-like_N UniProtKB/TrEMBL
  eEF-1beta-like_sf UniProtKB/TrEMBL
  EF-1_beta_acid_region_euk UniProtKB/TrEMBL
  EF1B_bsu/dsu UniProtKB/TrEMBL
  EF1B_bsu/dsu_GNE UniProtKB/TrEMBL
  Glutathione-S-Trfase_C_sf UniProtKB/TrEMBL
  Transl_elong_EF1B/ribosomal_S6 UniProtKB/TrEMBL
  Transl_elong_EF1B_B/D_CS UniProtKB/TrEMBL
NCBI Gene LOC100967910 ENTREZGENE
PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER UniProtKB/TrEMBL
  ELONGATION FACTOR 1-BETA UniProtKB/TrEMBL
  ELONGATION FACTOR 1-BETA UniProtKB/TrEMBL
Pfam Arc1p_N_like UniProtKB/TrEMBL
  EF-1_beta_acid UniProtKB/TrEMBL
  EF1_GNE UniProtKB/TrEMBL
PROSITE EF1BD_1 UniProtKB/TrEMBL
  EF1BD_2 UniProtKB/TrEMBL
SMART EF-1_beta_acid UniProtKB/TrEMBL
  EF1_GNE UniProtKB/TrEMBL
Superfamily-SCOP SSF47616 UniProtKB/TrEMBL
  SSF54984 UniProtKB/TrEMBL
UniProt A0A2R8ZF86 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9AUV0 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-07-01 LOC100967910  elongation factor 1-beta-like  LOC100967910  elongation factor 1-beta pseudogene  Symbol and/or name change 5135510 APPROVED