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Gene: MAB21L3 (mab-21 like 3) Pan paniscus

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Symbol:

MAB21L3

Name:

mab-21 like 3

RGD ID:

11781159

Description:

ASSOCIATED WITH catecholaminergic polymorphic ventricular tachycardia 1 (ortholog)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	MAB21L3 (mab-21 like 3)	NCBI	Ortholog
Mus musculus (house mouse):	Mab21l3 (mab-21-like 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Mab21l3 (mab-21 like 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Mab21l3 (mab-21 like 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	MAB21L3 (mab-21 like 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Mab21l3 (mab-21 like 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	MAB21L3 (mab-21 like 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	MAB21L3 (mab-21 like 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Mab21l3 (mab-21 like 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	108,749,983 - 108,784,482 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	108,358,513 - 108,382,323 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	86,432,777 - 86,457,064 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	121,482,368 - 121,504,903 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	121,481,357 - 121,504,841 (-)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

catecholaminergic polymorphic ventricular tachycardia 1 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Molecular Function

protein binding (ISO)

References

Genomics

Comparative Map Data

MAB21L3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	108,749,983 - 108,784,482 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	108,358,513 - 108,382,323 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	86,432,777 - 86,457,064 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	121,482,368 - 121,504,903 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	121,481,357 - 121,504,841 (-)	Ensembl	panpan1.1		panPan2

MAB21L3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	116,111,399 - 116,138,149 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	116,111,399 - 116,138,149 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	116,654,020 - 116,680,770 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	116,455,899 - 116,479,384 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	1	114,883,120 - 114,906,605 (+)	NCBI		Celera
Cytogenetic Map	1	p13.1	NCBI
HuRef	1	114,512,300 - 114,535,787 (+)	NCBI		HuRef
CHM1_1	1	116,769,127 - 116,792,612 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	116,119,359 - 116,146,123 (+)	NCBI		T2T-CHM13v2.0

Mab21l3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	101,720,392 - 101,743,601 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	101,720,392 - 101,756,275 (-)	Ensembl		GRCm39 Ensembl
GRCm38	3	101,813,076 - 101,836,283 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	101,813,076 - 101,848,959 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	101,616,999 - 101,640,146 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	101,942,137 - 101,965,022 (-)	NCBI		MGSCv36	mm8
Celera	3	104,025,072 - 104,048,098 (-)	NCBI		Celera
Cytogenetic Map	3	F2.2	NCBI
cM Map	3	44.3	NCBI

Mab21l3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	191,937,451 - 191,960,204 (-)	NCBI		GRCr8
mRatBN7.2	2	189,248,895 - 189,271,652 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	189,248,895 - 189,271,652 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	196,881,904 - 196,904,344 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	194,733,566 - 194,756,228 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	189,560,016 - 189,582,718 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	204,231,936 - 204,269,235 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	204,231,685 - 204,254,699 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	223,666,827 - 223,703,837 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	196,903,848 - 196,926,798 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	196,868,997 - 196,888,640 (-)	NCBI
Celera	2	181,682,377 - 181,705,041 (-)	NCBI		Celera
Cytogenetic Map	2	q34	NCBI

Mab21l3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955435	19,300,476 - 19,320,332 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955435	19,300,663 - 19,321,257 (+)	NCBI	ChiLan1.0	ChiLan1.0

MAB21L3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	17	53,583,510 - 53,606,091 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	17	53,585,088 - 53,605,748 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	17	53,230,527 - 53,252,848 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	17	54,464,336 - 54,486,101 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	17	54,464,330 - 54,487,212 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	17	53,501,954 - 53,524,391 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	17	53,538,046 - 53,561,138 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	17	54,110,868 - 54,133,173 (+)	NCBI		UU_Cfam_GSD_1.0

Mab21l3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	13,109,216 - 13,185,341 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936627	1,336,726 - 1,357,668 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936627	1,336,731 - 1,375,501 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MAB21L3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	104,599,818 - 104,625,234 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	104,572,922 - 104,651,287 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	114,663,158 - 114,741,427 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MAB21L3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	17,581,327 - 17,639,131 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	17,580,612 - 17,602,920 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	20,274,134 - 20,344,391 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Mab21l3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624772	11,845,855 - 11,865,929 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624772	11,844,823 - 11,864,342 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003805626	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034929868	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSPPAT00000051563 ⟹ ENSPPAP00000028715

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	1	121,481,357 - 121,504,841 (-)	Ensembl

RefSeq Acc Id:

XM_003805626 ⟹ XP_003805674

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	1	108,749,983 - 108,784,482 (+)	NCBI
NHGRI_mPanPan1	1	108,358,513 - 108,382,323 (+)	NCBI
Mhudiblu_PPA_v0	1	86,432,777 - 86,457,064 (-)	NCBI
PanPan1.1	1	121,482,368 - 121,504,903 (-)	NCBI

Sequence:

show sequence

CAAAACCAGACGTGAGTGTTCCCTCGACTCTCAAGGGACCTGTTTACACTGACTTTATTTTTAC
TGCCAGCTTTCAAGTTGGAAGAGGGAAATTACGTTTAAAGGTCAGCAGATGACAGATGGATTTT
CACAATTTGGAAATAAAAACATGAGTGAAGGGTTCGGAAGGCAAGTCTCTGGTCCATTACACAC
TTCCAGAAAAACTTAGTACCCAGAGACTCACATTACTGGGTGTGCTATCTACTCACAAGTGTTG
CACTCCATTGAGAAAAAAAAACAACAGGAAGTTGCTGTTCTACTGAGGACTGACCAAGAAGCCA
TGAAATACCTTACTGTGGGAGACTTAGAAGATTGCCTACTGAATAAGGTGGACTTGAGGCGGCA
GCAGATTTCCCAGGCTGTGGAGGAGGTGCAGAAAGTCGTTCATCATTTGACCACAAACATCAGC
AACCAAGACATTAGATTTCAAGCTGTGCCTTACTCTGACACGTACAATGAAAATATTAAGGTTT
TGGCTCCCAGTCAGTTCCTCGTCACAGTCCCAATAAAAGGCCTGGCCGGGTACAGGGAGGCCAG
GGAGCAGCACTGGCGGTACTACACCCTGCAGGGCACCAGGCTGCCCTGCCCATTGCGGGACCCT
GAGGGTCTGCAGCAGTGGCTGGAGGTGGAACAGTTTATGAAGAGCCTGTGGCAGTGGCATGAGA
CAGATGTGAACATCGACGGAGACATTGTGCCTGCCAAGGTCCTCCTAGTGTTCCGGAAGCTGGT
GGAAAATGCAATTAGAACCTGTCACCTCTCAGGTAAGGTCAGCCTGCTAGGAAACTGCTCTGCA
GTTTGGGTTGCTGTGGAAACATCTGCATATCAGGTGGAACTGGAGCTGGTCCCCACAGTGGAGA
TCCCCACCACCTGGTCCAAGAAAGCCCGGTGGCCTCGATGTCTGCAGCGCTGGCCTTCCCAAGA
GAGAGTGGAGTGCATCAAGTCGTTTGGGTTTAACTTGTTGGCCTGTTCAAATTATCACTGGCAG
CTGAGCTTCCTCCGTGCTGAGCAGGTGTTACTGGAACAGCTGGATGAAGATGGGGGCTGCCGTA
GGAAGTGTTTTCAGGTCATGAGGCACCTGAAGGAGGACATCTGGTGCCCGGGGAACAGGCCGGT
TATCACGTCCCACCATCTGCAGACTGTGCTCTTTTGGACCTGCGAGAAATATCCCCACTTTAAA
GACTGGCAGGTCTTCAGCAAAGCATTTCTGCGCCTGGTGAGGAAACTGCACAAGTGCGTGAGCC
AGCACTTCCTGAAACACTATTTCGTCCGGAACAGCAACCTCTTTCAGTGCACCAACCCGACTGA
ACTGGACACTGTGGCCCAAAAGCTGGCCACCTTCCTGAAGAACCCCCAGATCGGCCCGCCCTGA
TGGTTGCCCCGGCCTGGGAGGCTCTTGGACATTTTATTCTGGCTTAACCTTGTTCTTTGGATGG
TTCCTCAGTCAGGTGCCAGGATCCTGCCTAGGAGAAAGGCCATGAATGGCAGCGGAAATTACAT
CAAACCAGTAACACTTCAGCAGGGGGAAAACTGTGCCCCAGGATGTCTGGCCCAGGCCTCCCTG
GAGCCCAGCAAGCATTTCCGCCCTAGCTAATTCTCCTGGAGACAGCTCTCATCAGGCTTCCCCA
GGCACAGATTTGGAACTGGTGACAGTTCTGAACTTAGTTTCCCTTGTTCAGGCTCTGATCGTCT
CACAGTGAAGATGGAGACAGAACCCCTGGAAGTCTGGACATGAGCCTGCTGGCCAATACTGTGC
CCAGCCCACTGATCATGGGCACATTCTCCTGCCATTTGTAAAATGGGAATGTTAACGTGCCTAC
CTCTGAGCAGGGCTGTGTGCCTATGAAACTGTGCTGGCGCCTTTTCAAGGGGAAGGCATTGGAT
CAACACAAAGTGTTCCTGGTTGGTTGAGTAGCTGGTGTTTGCATCCTGGATCGGTACCCACAGC
ACTTACGCAAAATTGCACCTGATGAGTTAGCGAGCCTGTGCTTCCTTGCTGCCCTCCAGCTTCC
TTAGCATGTGGGTCAGTGGCTCCTGATGTTCTGTCTGCTTCCCTGGTATTCTCTAAGCAGGGAG
GGGAGTGGTTTTGATGATAAGTGTAAGTCAAAGATGAAAGTACAACTCTTGGCCTGATCCCAAC
CATAGACCTCTCTTCGCTTCCCATGCCATGGGCCATGGATGGAACTTCCTTATATATTTATGTA
AATAACCTAGTACTATGATCTGCATGGAGTGAC

hide sequence

Protein Sequences


Protein RefSeqs	XP_003805674	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000028715.1

RefSeq Acc Id:

XP_003805674 ⟸ XM_003805626

- UniProtKB:

A0A2R9BGG0 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MKYLTVGDLEDCLLNKVDLRRQQISQAVEEVQKVVHHLTTNISNQDIRFQAVPYSDTYNENIKV
LAPSQFLVTVPIKGLAGYREAREQHWRYYTLQGTRLPCPLRDPEGLQQWLEVEQFMKSLWQWHE
TDVNIDGDIVPAKVLLVFRKLVENAIRTCHLSGKVSLLGNCSAVWVAVETSAYQVELELVPTVE
IPTTWSKKARWPRCLQRWPSQERVECIKSFGFNLLACSNYHWQLSFLRAEQVLLEQLDEDGGCR
RKCFQVMRHLKEDIWCPGNRPVITSHHLQTVLFWTCEKYPHFKDWQVFSKAFLRLVRKLHKCVS
QHFLKHYFVRNSNLFQCTNPTELDTVAQKLATFLKNPQIGPP

hide sequence

Ensembl Acc Id:

ENSPPAP00000028715 ⟸ ENSPPAT00000051563

Protein Domains

Mab-21-like HhH/H2TH-like Mab-21-like nucleotidyltransferase

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000037392	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000051563.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.1410.40	UniProtKB/TrEMBL
	3.30.460.90	UniProtKB/TrEMBL
InterPro	Mab-21-like_nuc_Trfase	UniProtKB/TrEMBL
	Mab-21_dom	UniProtKB/TrEMBL
	Mab-21_HhH/H2TH-like	UniProtKB/TrEMBL
KEGG Report	pps:100993500	UniProtKB/TrEMBL
NCBI Gene	MAB21L3	ENTREZGENE
PANTHER	CELL FATE DETERMINING PROTEIN MAB21-RELATED	UniProtKB/TrEMBL
	PTHR10656:SF30	UniProtKB/TrEMBL
Pfam	Mab-21	UniProtKB/TrEMBL
	Mab-21_C	UniProtKB/TrEMBL
SMART	Mab-21	UniProtKB/TrEMBL
UniProt	A0A2R9BGG0	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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