RNF180 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 4 | 49,538,975 - 49,756,877 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 5 | 47,692,604 - 47,913,062 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 5 | 49,624,452 - 49,841,741 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 5 | 51,279,999 - 51,489,588 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 5 | 51,280,064 - 51,454,750 (-) | Ensembl | panpan1.1 | | panPan2 | |
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RNF180 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 5 | 64,165,351 - 64,372,869 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 5 | 64,165,843 - 64,372,869 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 5 | 63,461,670 - 63,668,696 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 5 | 63,497,427 - 63,549,369 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 5 | 63,497,426 - 63,549,369 | NCBI | | | | | Celera | 5 | 60,458,571 - 60,665,603 (+) | NCBI | | Celera | | | Cytogenetic Map | 5 | q12.3 | NCBI | | | | | HuRef | 5 | 60,416,366 - 60,622,951 (+) | NCBI | | HuRef | | | CHM1_1 | 5 | 63,461,335 - 63,668,352 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 5 | 64,985,393 - 65,192,972 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Rnf180 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 13 | 105,267,075 - 105,431,406 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 13 | 105,266,509 - 105,431,323 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 13 | 105,130,567 - 105,294,818 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 13 | 105,130,001 - 105,294,815 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 13 | 105,937,574 - 106,083,094 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 13 | 106,250,383 - 106,415,159 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 13 | 109,539,891 - 109,686,561 (-) | NCBI | | Celera | | | Cytogenetic Map | 13 | D1 | NCBI | | | | | cM Map | 13 | 56.92 | NCBI | | | | |
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Rnf180 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 2 | 38,064,026 - 38,244,854 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 2 | 36,330,285 - 36,511,168 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 2 | 36,330,292 - 36,512,614 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 2 | 43,445,446 - 43,632,757 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 2 | 41,504,097 - 41,691,415 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 2 | 36,359,389 - 36,546,713 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 2 | 35,718,100 - 35,892,578 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 2 | 35,718,889 - 35,870,578 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 2 | 54,840,702 - 55,009,539 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 2 | 36,186,010 - 36,253,660 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 2 | 32,280,890 - 32,455,843 (-) | NCBI | | Celera | | | Cytogenetic Map | 2 | q13 | NCBI | | | | |
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Rnf180 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955446 | 4,543,974 - 4,733,569 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955446 | 4,544,128 - 4,733,295 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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RNF180 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 2 | 50,166,987 - 50,353,694 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 2 | 50,197,137 - 50,352,946 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 2 | 47,123,982 - 47,310,531 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 2 | 50,652,171 - 50,838,819 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 2 | 50,583,194 - 50,838,812 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 2 | 47,713,305 - 47,899,710 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 2 | 48,504,093 - 48,695,296 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 2 | 49,398,273 - 49,582,944 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Rnf180 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024407213 | 195,722,482 - 195,898,525 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936480 | 4,659,751 - 4,834,972 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936480 | 4,809,103 - 4,834,977 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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RNF180 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 16 | 42,723,065 - 42,953,592 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 16 | 42,686,225 - 42,951,928 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 16 | 45,753,323 - 46,078,166 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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RNF180 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 4 | 60,340,926 - 60,555,932 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 4 | 60,340,804 - 60,557,227 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666049 | 8,946,267 - 9,171,918 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Rnf180 (Heterocephalus glaber - naked mole-rat) |
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