LOC100985075 (taste receptor type 2 member 20) - Rat Genome Database

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Gene: LOC100985075 (taste receptor type 2 member 20) Pan paniscus
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Symbol: LOC100985075 (Ensembl: TAS2R20)
Name: taste receptor type 2 member 20 (Ensembl:taste 2 receptor member 20)
RGD ID: 11700350
Description: ENCODES a protein that exhibits bitter taste receptor activity (inferred); G protein-coupled receptor activity (inferred); INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (inferred); G protein-coupled receptor signaling pathway (inferred); sensory perception of taste (inferred); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: TAS2R; TAS2R20; TAS2R49; taste 2 receptor member 20; taste receptor T2R49; Taste receptor type 2 member 49
RGD Orthologs
Human
Rat
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21016,469,189 - 16,470,841 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11216,465,945 - 16,486,645 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01211,025,361 - 11,033,572 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11211,291,990 - 11,294,287 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1211,292,936 - 11,293,865 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:15466715   PMID:15496549   PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
LOC100985075
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21016,469,189 - 16,470,841 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11216,465,945 - 16,486,645 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01211,025,361 - 11,033,572 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11211,291,990 - 11,294,287 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1211,292,936 - 11,293,865 (-)Ensemblpanpan1.1panPan2
TAS2R20
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381210,995,961 - 10,998,304 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1210,995,961 - 10,998,304 (-)EnsemblGRCh38hg38GRCh38
GRCh371211,148,560 - 11,150,903 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361211,039,828 - 11,041,741 (-)NCBINCBI36Build 36hg18NCBI36
Build 341211,040,811 - 11,041,741NCBI
Celera1216,296,576 - 16,298,489 (-)NCBICelera
Cytogenetic Map12p13.2NCBI
HuRef1210,876,942 - 10,878,855 (-)NCBIHuRef
CHM1_11211,117,863 - 11,119,776 (-)NCBICHM1_1
T2T-CHM13v2.01210,868,982 - 10,871,325 (-)NCBIT2T-CHM13v2.0
Tas2r120
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84167,683,670 - 167,684,557 (+)NCBIGRCr8
mRatBN7.24165,952,266 - 165,953,153 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4165,952,266 - 165,953,153 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4172,248,616 - 172,249,503 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04168,031,629 - 168,032,517 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04166,665,675 - 166,666,562 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04166,833,320 - 166,834,207 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4166,833,320 - 166,834,207 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04229,361,929 - 229,362,816 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44169,980,422 - 169,981,309 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera4154,548,371 - 154,549,258 (+)NCBICelera
Cytogenetic Map4q42NCBI
TAS2R20
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11110,935,490 - 10,938,807 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1110,936,104 - 10,937,030 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606924,242,256 - 24,243,235 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSPPAT00000027830   ⟹   ENSPPAP00000006487
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1211,292,936 - 11,293,865 (-)Ensembl
RefSeq Acc Id: XM_055095397   ⟹   XP_054951372
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21016,469,189 - 16,470,841 (-)NCBI
NHGRI_mPanPan11216,465,945 - 16,486,645 (-)NCBI
Protein Sequences
Protein RefSeqs XP_054951372 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAU21076 (Get FASTA)   NCBI Sequence Viewer  
  AAV28581 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000006487.1
GenBank Protein Q646E3 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Acc Id: ENSPPAP00000006487   ⟸   ENSPPAT00000027830
RefSeq Acc Id: XP_054951372   ⟸   XM_055095397
- UniProtKB: Q646E3 (UniProtKB/Swiss-Prot)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000025189 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSPPAT00000027830.1 UniProtKB/Swiss-Prot
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/Swiss-Prot
InterPro TAS2R UniProtKB/Swiss-Prot
NCBI Gene TAS2R20 ENTREZGENE
PANTHER TASTE RECEPTOR TYPE 2 UniProtKB/Swiss-Prot
  TASTE RECEPTOR TYPE 2 MEMBER 20 UniProtKB/Swiss-Prot
Pfam TAS2R UniProtKB/Swiss-Prot
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/Swiss-Prot
UniProt Q646E3 ENTREZGENE, UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-05-08 LOC100985075  taste receptor type 2 member 20  TAS2R20  taste 2 receptor member 20  Symbol and/or name change 5135510 APPROVED