RN7SL284P (RNA, 7SL, cytoplasmic 284, pseudogene) - Rat Genome Database

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Gene: RN7SL284P (RNA, 7SL, cytoplasmic 284, pseudogene) Homo sapiens
Analyze
Symbol: RN7SL284P
Name: RNA, 7SL, cytoplasmic 284, pseudogene
RGD ID: 10413601
HGNC Page HGNC:46300
Description:
Type: pseudo (Ensembl: misc_RNA)
RefSeq Status: INFERRED
Related Functional Gene: RN7SL1  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381077,912,271 - 77,912,545 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1077,912,271 - 77,912,545 (-)EnsemblGRCh38hg38GRCh38
GRCh371079,672,029 - 79,672,303 (-)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map10q22.3NCBI
CHM1_11079,954,825 - 79,955,099 (-)NCBICHM1_1
T2T-CHM13v2.01078,781,316 - 78,781,590 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:88
Count of miRNA genes:82
Interacting mature miRNAs:83
Transcripts:ENST00000498823
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium
Low 19 5 28 1 22 1 52 8 39 19 40 24 3 21 1
Below cutoff 230 97 194 36 84 23 403 171 260 50 172 144 17 46 195 2

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000498823
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1077,912,271 - 77,912,545 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC RN7SL284P COSMIC
Ensembl Genes ENSG00000243446 Ensembl, ENTREZGENE
GTEx ENSG00000243446 GTEx
HGNC ID HGNC:46300 ENTREZGENE
Human Proteome Map RN7SL284P Human Proteome Map
NCBI Gene RN7SL284P ENTREZGENE