RNU7-195P (RNA, U7 small nuclear 195 pseudogene) - Rat Genome Database

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Gene: RNU7-195P (RNA, U7 small nuclear 195 pseudogene) Homo sapiens
Analyze
Symbol: RNU7-195P
Name: RNA, U7 small nuclear 195 pseudogene
RGD ID: 10413468
HGNC Page HGNC:45729
Description:
Type: pseudo (Ensembl: snRNA)
RefSeq Status: INFERRED
Related Functional Gene: RNU7-1  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381589,120,779 - 89,120,840 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1589,120,779 - 89,120,840 (+)EnsemblGRCh38hg38GRCh38
GRCh371589,664,010 - 89,664,071 (+)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map15q26.1NCBI
CHM1_11589,504,986 - 89,505,047 (+)NCBICHM1_1
T2T-CHM13v2.01586,875,608 - 86,875,669 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:151
Count of miRNA genes:150
Interacting mature miRNAs:150
Transcripts:ENST00000458793
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium 1 1 4 2 1
Low 34 9 29 16 57 16 23 7 17 15 20 29 1 1 4
Below cutoff 10 3 5 23 2 10 15 20 8 8 12 1

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000458793
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1589,120,779 - 89,120,840 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC RNU7-195P COSMIC
Ensembl Genes ENSG00000239151 Ensembl, ENTREZGENE
GTEx ENSG00000239151 GTEx
HGNC ID HGNC:45729 ENTREZGENE
Human Proteome Map RNU7-195P Human Proteome Map
NCBI Gene RNU7-195P ENTREZGENE