RN7SL614P (RNA, 7SL, cytoplasmic 614, pseudogene) - Rat Genome Database

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Gene: RN7SL614P (RNA, 7SL, cytoplasmic 614, pseudogene) Homo sapiens
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Symbol: RN7SL614P
Name: RNA, 7SL, cytoplasmic 614, pseudogene
RGD ID: 10413404
HGNC Page HGNC:46630
Description:
Type: pseudo (Ensembl: misc_RNA)
RefSeq Status: INFERRED
Related Functional Gene: RN7SL1  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38110,616,836 - 10,617,115 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl110,616,836 - 10,617,115 (+)EnsemblGRCh38hg38GRCh38
GRCh37110,676,893 - 10,677,172 (+)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map1p36.22NCBI
CHM1_1110,664,618 - 10,664,897 (+)NCBICHM1_1
T2T-CHM13v2.0110,160,433 - 10,160,712 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:259
Count of miRNA genes:225
Interacting mature miRNAs:238
Transcripts:ENST00000461850
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1298451OSTEAR17_HOsteoarthritis QTL 17 (human)2.40.0004Joint/bone inflammationosteoarthritis11125188105Human
1576329MYI9_HMyocardial infarction susceptibility QTL 9 (human)12Myocardial infarction susceptibilityearly-onset1758550333585503Human
1298463BP9_HBlood pressure QTL 9 (human)3.9Blood pressurehypertension susceptibility1125188105Human
1576325MYI1_HMyocardial infarction susceptibility QTL 1 (human)11.681e-12Myocardial infarction susceptibilityearly-onset1758550333585503Human
1643380BW316_HBody weight QTL 316 (human)2.620.0002Body weightBMI1758550333585503Human


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
853 1527 1864 1215 3278 1271 1745 3 411 957 273 1826 4009 3755 47 2298 590 1344 1244 148

Sequence


Ensembl Acc Id: ENST00000461850
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl110,616,836 - 10,617,115 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC RN7SL614P COSMIC
Ensembl Genes ENSG00000243267 Ensembl, ENTREZGENE
GTEx ENSG00000243267 GTEx
HGNC ID HGNC:46630 ENTREZGENE
Human Proteome Map RN7SL614P Human Proteome Map
NCBI Gene RN7SL614P ENTREZGENE