RN7SL204P (RNA, 7SL, cytoplasmic 204, pseudogene) - Rat Genome Database

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Gene: RN7SL204P (RNA, 7SL, cytoplasmic 204, pseudogene) Homo sapiens
Analyze
Symbol: RN7SL204P
Name: RNA, 7SL, cytoplasmic 204, pseudogene
RGD ID: 10413390
HGNC Page HGNC:46220
Description:
Type: pseudo (Ensembl: misc_RNA)
RefSeq Status: INFERRED
Related Functional Gene: RN7SL1  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382236,072,295 - 236,072,556 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2236,072,295 - 236,072,556 (+)EnsemblGRCh38hg38GRCh38
GRCh372236,980,939 - 236,981,200 (+)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map2q37.2NCBI
T2T-CHM13v2.02236,562,018 - 236,562,279 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:144
Count of miRNA genes:141
Interacting mature miRNAs:143
Transcripts:ENST00000582831
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium
Low 72 13 32 12 115 16 135 38 92 51 87 115 1 6 21 3
Below cutoff 235 175 131 47 105 32 429 127 311 61 145 198 19 96 237

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000582831
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2236,072,295 - 236,072,556 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC RN7SL204P COSMIC
Ensembl Genes ENSG00000264676 Ensembl, ENTREZGENE
GTEx ENSG00000264676 GTEx
HGNC ID HGNC:46220 ENTREZGENE
Human Proteome Map RN7SL204P Human Proteome Map
NCBI Gene RN7SL204P ENTREZGENE