RN7SL19P (RNA, 7SL, cytoplasmic 19, pseudogene) - Rat Genome Database

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Gene: RN7SL19P (RNA, 7SL, cytoplasmic 19, pseudogene) Homo sapiens
Analyze
Symbol: RN7SL19P
Name: RNA, 7SL, cytoplasmic 19, pseudogene
RGD ID: 10413214
HGNC Page HGNC:46035
Description:
Type: pseudo (Ensembl: misc_RNA)
RefSeq Status: INFERRED
Related Functional Gene: RN7SL1  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38870,654,578 - 70,654,883 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl870,654,578 - 70,654,883 (-)EnsemblGRCh38hg38GRCh38
GRCh37871,566,813 - 71,567,118 (-)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map8q13.3NCBI
CHM1_1871,622,333 - 71,622,638 (-)NCBICHM1_1
T2T-CHM13v2.0871,084,487 - 71,084,792 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:143
Count of miRNA genes:143
Interacting mature miRNAs:143
Transcripts:ENST00000462522
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium
Low 86 30 185 26 379 27 72 29 159 70 145 107 1 16 32
Below cutoff 582 625 625 206 421 152 816 334 748 133 511 615 56 266 493 3

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000462522
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl870,654,578 - 70,654,883 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC RN7SL19P COSMIC
Ensembl Genes ENSG00000243532 Ensembl, ENTREZGENE
GTEx ENSG00000243532 GTEx
HGNC ID HGNC:46035 ENTREZGENE
Human Proteome Map RN7SL19P Human Proteome Map
NCBI Gene RN7SL19P ENTREZGENE