RN7SL18P (RNA, 7SL, cytoplasmic 18, pseudogene) - Rat Genome Database

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Gene: RN7SL18P (RNA, 7SL, cytoplasmic 18, pseudogene) Homo sapiens
Analyze
Symbol: RN7SL18P
Name: RNA, 7SL, cytoplasmic 18, pseudogene
RGD ID: 10412601
HGNC Page HGNC:46034
Description:
Type: pseudo (Ensembl: misc_RNA)
RefSeq Status: INFERRED
Related Functional Gene: RN7SL1  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38262,491,178 - 62,491,468 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl262,491,178 - 62,491,468 (+)EnsemblGRCh38hg38GRCh38
GRCh37262,718,313 - 62,718,603 (+)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map2p15NCBI
CHM1_1262,648,882 - 62,649,172 (+)NCBICHM1_1
T2T-CHM13v2.0262,497,500 - 62,497,790 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:90
Count of miRNA genes:90
Interacting mature miRNAs:90
Transcripts:ENST00000466851
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium
Low 9 4 20 4 16 3 45 2 34 25 37 34 1 3 29
Below cutoff 146 165 173 69 70 31 412 88 350 65 174 182 40 65 268 2

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000466851
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl262,491,178 - 62,491,468 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC RN7SL18P COSMIC
Ensembl Genes ENSG00000241625 Ensembl, ENTREZGENE
GTEx ENSG00000241625 GTEx
HGNC ID HGNC:46034 ENTREZGENE
Human Proteome Map RN7SL18P Human Proteome Map
NCBI Gene RN7SL18P ENTREZGENE