RN7SL168P (RNA, 7SL, cytoplasmic 168, pseudogene) - Rat Genome Database

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Gene: RN7SL168P (RNA, 7SL, cytoplasmic 168, pseudogene) Homo sapiens
Analyze
Symbol: RN7SL168P
Name: RNA, 7SL, cytoplasmic 168, pseudogene
RGD ID: 10400136
HGNC Page HGNC:46184
Description:
Type: pseudo (Ensembl: misc_RNA)
RefSeq Status: INFERRED
Related Functional Gene: RN7SL1  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382219,365,765 - 19,366,044 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2219,365,766 - 19,366,044 (+)EnsemblGRCh38hg38GRCh38
GRCh372219,353,288 - 19,353,567 (+)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map22q11.21NCBI
CHM1_12219,352,873 - 19,353,152 (+)NCBICHM1_1
T2T-CHM13v2.02219,742,475 - 19,742,754 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:235
Count of miRNA genes:225
Interacting mature miRNAs:234
Transcripts:ENST00000463821
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium
Low 50 68 109 9 165 5 194 61 72 8 58 132 4 28 113
Below cutoff 394 558 420 105 320 69 1197 534 551 51 308 407 38 235 796 1

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000463821
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2219,365,766 - 19,366,044 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC RN7SL168P COSMIC
Ensembl Genes ENSG00000244296 Ensembl, ENTREZGENE
GTEx ENSG00000244296 GTEx
HGNC ID HGNC:46184 ENTREZGENE
Human Proteome Map RN7SL168P Human Proteome Map
NCBI Gene RN7SL168P ENTREZGENE