ZNF736P5Y (zinc finger protein 736 pseudogene 5, Y-linked) - Rat Genome Database

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Gene: ZNF736P5Y (zinc finger protein 736 pseudogene 5, Y-linked) Homo sapiens
Analyze
Symbol: ZNF736P5Y
Name: zinc finger protein 736 pseudogene 5, Y-linked
RGD ID: 10400099
HGNC Page HGNC:38597
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: ZNF736  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38Y25,018,304 - 25,019,312 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblY25,018,499 - 25,019,303 (-)EnsemblGRCh38hg38GRCh38
GRCh37Y27,164,451 - 27,165,459 (-)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic MapYq11.23NCBI
T2T-CHM13v2.0Y25,830,701 - 25,831,708 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:168
Count of miRNA genes:162
Interacting mature miRNAs:166
Transcripts:ENST00000451173
Prediction methods:Miranda, Pita, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hepatobiliary system integumental system nervous system renal system reproductive system respiratory system appendage
High
Medium
Low
Below cutoff 1 1 13 12 12 1 1 22 2 5 1

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000451173
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 EnsemblY25,018,499 - 25,019,303 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC ZNF736P5Y COSMIC
Ensembl Genes ENSG00000230819 Ensembl
GTEx ENSG00000230819 GTEx
HGNC ID HGNC:38597 ENTREZGENE
Human Proteome Map ZNF736P5Y Human Proteome Map
NCBI Gene ZNF736P5Y ENTREZGENE
PharmGKB PA165791926 PharmGKB