RN7SL814P (RNA, 7SL, cytoplasmic 814, pseudogene) - Rat Genome Database

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Gene: RN7SL814P (RNA, 7SL, cytoplasmic 814, pseudogene) Homo sapiens
Analyze
Symbol: RN7SL814P
Name: RNA, 7SL, cytoplasmic 814, pseudogene
RGD ID: 10399935
HGNC Page HGNC:46830
Description:
Type: pseudo (Ensembl: misc_RNA)
RefSeq Status: INFERRED
Related Functional Gene: RN7SL1  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38574,317,986 - 74,318,285 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl574,317,986 - 74,318,285 (+)EnsemblGRCh38hg38GRCh38
GRCh37573,613,811 - 73,614,110 (+)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map5q13.3NCBI
CHM1_1573,046,183 - 73,046,482 (+)NCBICHM1_1
T2T-CHM13v2.0574,799,032 - 74,799,331 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:49
Count of miRNA genes:46
Interacting mature miRNAs:47
Transcripts:ENST00000487715
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium
Low 4 1 4 1 1 10 6 2
Below cutoff 55 23 33 7 27 6 34 22 74 16 61 26 1 7 23 2

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000487715
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl574,317,986 - 74,318,285 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC RN7SL814P COSMIC
Ensembl Genes ENSG00000244326 Ensembl, ENTREZGENE
GTEx ENSG00000244326 GTEx
HGNC ID HGNC:46830 ENTREZGENE
Human Proteome Map RN7SL814P Human Proteome Map
NCBI Gene RN7SL814P ENTREZGENE