Gene: RNU6-801P (RNA, U6 small nuclear 801, pseudogene) Homo sapiens |
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Analyze |
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Symbol: |
RNU6-801P |
Name: |
RNA, U6 small nuclear 801, pseudogene |
RGD ID: |
10398915 |
HGNC Page |
HGNC:47764 |
Description: |
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Type: |
pseudo (Ensembl: snRNA)
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RefSeq Status: |
INFERRED |
RGD Orthologs |
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Alliance Genes |
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More Info |
more info ...
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More Info |
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Related Functional Gene: |
RNU6-1
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Latest Assembly: |
GRCh38 - Human Genome Assembly GRCh38 |
Position: |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 6 | 19,642,425 - 19,642,529 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 6 | 19,642,425 - 19,642,529 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 6 | 19,642,656 - 19,642,760 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Cytogenetic Map | 6 | p22.3 | NCBI | | | | | CHM1_1 | 6 | 19,645,431 - 19,645,535 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 6 | 19,514,023 - 19,514,127 (-) | NCBI | | T2T-CHM13v2.0 | | |
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JBrowse: |
View Region in Genome Browser (JBrowse)
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Model |
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References
Genomics
Comparative Map Data
RNU6-801P (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 6 | 19,642,425 - 19,642,529 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 6 | 19,642,425 - 19,642,529 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 6 | 19,642,656 - 19,642,760 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Cytogenetic Map | 6 | p22.3 | NCBI | | | | | CHM1_1 | 6 | 19,645,431 - 19,645,535 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 6 | 19,514,023 - 19,514,127 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Gm26375 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 17 | 13,754,326 - 13,754,431 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 17 | 13,754,326 - 13,754,431 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 17 | 13,534,064 - 13,534,169 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 17 | 13,534,064 - 13,534,169 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | Cytogenetic Map | 17 | A1 | NCBI | | | | |
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LOC119881755 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ROS_Cfam_1.0 | 15 | 18,898,715 - 18,898,821 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 15 | 18,898,715 - 18,898,821 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | |
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miRNA Target Status
Predicted Target Of
Count of predictions: | 41 | Count of miRNA genes: | 41 | Interacting mature miRNAs: | 41 | Transcripts: | ENST00000364087 | Prediction methods: | Miranda, Rnahybrid, Targetscan | Result types: | miRGate_prediction | |
Expression
RNA-SEQ Expression
High: > 1000 TPM value
Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM
Below Cutoff: < 0.5 TPM
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alimentary part of gastrointestinal system |
circulatory system |
endocrine system |
exocrine system |
hemolymphoid system |
hepatobiliary system |
integumental system |
musculoskeletal system |
nervous system |
renal system |
reproductive system |
respiratory system |
adipose tissue |
appendage |
High |
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Medium |
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Low |
2
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7
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17
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2
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4
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2
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11
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8
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2
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8
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17
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7
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Below cutoff |
4
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2
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27
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4
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9
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4
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17
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3
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17
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29
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2
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4
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Sequence
RefSeq Acc Id: |
ENST00000364087 |
Type: |
CODING |
Position: |
Human Assembly | Chr | Position (strand) | Source |
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GRCh38.p14 Ensembl | 6 | 19,642,425 - 19,642,529 (-) | Ensembl |
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Additional Information
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