Gm38545 (predicted gene, 38545) - Rat Genome Database

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Gene: Gm38545 (predicted gene, 38545) Mus musculus
Analyze
Symbol: Gm38545
Name: predicted gene, 38545
RGD ID: 10038329
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: VALIDATED
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394124,558,087 - 124,561,985 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4124,558,079 - 124,562,046 (-)EnsemblGRCm39 Ensembl
GRCm384124,664,294 - 124,668,192 (-)NCBIGRCm38GRCm38mm10GRCm38
Celera4122,989,982 - 122,994,379 (-)NCBICelera
Cytogenetic Map4D2.2NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in Gm38545
149 total Variants

1 to 10 of 68 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
10047132Albq19_malbuminuria QTL 19 (mouse)Not determined4112824389146824389Mouse
12904002Opfaq9_mopen field activity QTL 9 (mouse)492975790126975790Mouse
1301525Lmb1_mlupus in MRL and B6 F2 cross (mouse)Not determined4124264957150676858Mouse
14746982Manh56_mmandible shape 56 (mouse)4117815917151815917Mouse
4141623W6q13_mweight 6 weeks QTL 13 (mouse)Not determined88982069140468203Mouse
12910797Pwgrq4_mpre-weaning growth rate QTL 4 (mouse)4105835310141433838Mouse
25314312Syncl2_msynaptonemal complex length 2 (mouse)465718237146584457Mouse
12910794Pwbwq8_mpost-weaning body weight QTL 8 (mouse)4105835310141433838Mouse
14696689Gdq2_mgrooming duration QTL 2, females (mouse)4100857197124893793Mouse
1300743Skull6_mskull morphology 6 (mouse)Not determined4111009051145009280Mouse

1 to 10 of 68 rows





RefSeq Transcripts NR_168614 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_168615 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AL606907 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000316517
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4124,558,086 - 124,562,046 (-)Ensembl
Ensembl Acc Id: ENSMUST00000316518
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4124,558,087 - 124,562,021 (-)Ensembl
Ensembl Acc Id: ENSMUST00000316519
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4124,558,087 - 124,562,021 (-)Ensembl
Ensembl Acc Id: ENSMUST00000316520
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4124,558,079 - 124,562,007 (-)Ensembl
Ensembl Acc Id: ENSMUST00000316521
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4124,558,089 - 124,561,999 (-)Ensembl
Ensembl Acc Id: ENSMUST00000316522
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4124,558,087 - 124,561,994 (-)Ensembl
Ensembl Acc Id: ENSMUST00000316523
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4124,558,089 - 124,561,994 (-)Ensembl
Ensembl Acc Id: ENSMUST00000316524
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4124,558,104 - 124,561,985 (-)Ensembl
Ensembl Acc Id: ENSMUST00000316525
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4124,558,094 - 124,561,972 (-)Ensembl
Ensembl Acc Id: ENSMUST00000316526
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4124,558,091 - 124,561,966 (-)Ensembl
Ensembl Acc Id: ENSMUST00000316527
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4124,558,433 - 124,561,981 (-)Ensembl
RefSeq Acc Id: NR_168614
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394124,558,087 - 124,561,985 (-)NCBI
GRCm384124,664,294 - 124,668,192 (-)NCBI
Sequence:
RefSeq Acc Id: NR_168615
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394124,558,087 - 124,561,985 (-)NCBI
GRCm384124,664,294 - 124,668,192 (-)NCBI
Sequence:


Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000133192 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000316517 ENTREZGENE
  ENSMUST00000316520 ENTREZGENE
MGD MGI:5621430 ENTREZGENE
NCBI Gene Gm38545 ENTREZGENE
PhenoGen Gm38545 PhenoGen
RNAcentral URS0001BBE5A7 RNACentral
  URS0001BBE5B2 RNACentral