Gm14221 (predicted gene 14221) - Rat Genome Database

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Gene: Gm14221 (predicted gene 14221) Mus musculus
Analyze
Symbol: Gm14221
Name: predicted gene 14221
RGD ID: 10000386
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: MODEL
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392160,409,540 - 160,422,689 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2160,262,902 - 160,498,188 (-)EnsemblGRCm39 Ensembl
GRCm382160,567,634 - 160,580,769 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2160,568,379 - 160,619,971 (-)EnsemblGRCm38mm10GRCm38
Celera2166,499,462 - 166,512,589 (-)NCBICelera
Cytogenetic Map2H2NCBI
cM Map280.95NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Gm14221Mousebiological_process involved_inND 2290270 MGIGO_REF:0000015

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Gm14221Mousecellular_component is_active_inND 2290270 MGIGO_REF:0000015

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Gm14221Mousemolecular_function enablesND 2290270 MGIGO_REF:0000015

PMID:21677750  



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Variants in Gm14221
874 total Variants

Predicted Target Of
Summary Value
Count of predictions:85
Count of miRNA genes:84
Interacting mature miRNAs:85
Transcripts:ENSMUST00000109473
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 51 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1301907Rends_mrenal disease susceptibility (mouse)Not determined2135699221169699361Mouse
1301783Bhr1_mbronchial hyperresponsiveness 1 (mouse)Not determined2142593476178442452Mouse
12790983Bwq12_mbody weight QTL 12 (mouse)2148238204181755017Mouse
1301019Bmd6_mbone mineral density 6 (mouse)Not determined2151778297181755017Mouse
12910799Pwgrq2_mpre-weaning growth rate QTL 2 (mouse)2118589253160611165Mouse
1558939Gnf1_mgrowth and fatness 1 (mouse)Not determined2143773445169117924Mouse
12910795Pwbwq5_mpost-weaning body weight QTL 5 (mouse)2118589253160611165Mouse
1300867Lore2_mloss of righting induced by ethanol 2 (mouse)Not determined2144515861180896594Mouse
1558917Gct8_mgranulosa cell tumorigenesis 8 (mouse)Not determined2149236907181755017Mouse
12910812Pwgrq1_mpre-weaning growth rate QTL 1 (mouse)2118589253160611165Mouse

1 to 10 of 51 rows





RefSeq Transcripts XR_866918 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_866919 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AL591905 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000109473
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,410,299 - 160,461,891 (-)Ensembl
GRCm38.p6 Ensembl2160,568,379 - 160,619,971 (-)Ensembl
Ensembl Acc Id: ENSMUST00000209603
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,447,916 - 160,461,891 (-)Ensembl
GRCm38.p6 Ensembl2160,605,996 - 160,619,971 (-)Ensembl
Ensembl Acc Id: ENSMUST00000247396
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,409,532 - 160,498,188 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329821
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,409,525 - 160,422,918 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329822
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,409,528 - 160,422,795 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329823
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,458,659 - 160,462,009 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329824
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,461,592 - 160,461,987 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329825
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,262,902 - 160,362,566 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329826
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,262,902 - 160,347,097 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329827
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,344,293 - 160,421,069 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329828
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,357,276 - 160,421,095 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329829
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,321,148 - 160,362,566 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329830
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,321,150 - 160,362,566 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329831
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,328,009 - 160,362,568 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329832
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,328,009 - 160,362,566 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329833
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,328,008 - 160,362,563 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329834
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,328,129 - 160,362,566 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329835
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,328,129 - 160,362,563 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329836
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,328,134 - 160,362,566 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329837
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,328,136 - 160,362,566 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329838
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,328,136 - 160,362,566 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329839
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,328,136 - 160,362,563 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329840
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,328,136 - 160,362,563 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329841
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,328,141 - 160,362,566 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329842
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,328,141 - 160,362,563 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329843
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,328,141 - 160,362,563 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329844
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,328,141 - 160,362,559 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329845
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,328,141 - 160,361,800 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329846
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,328,160 - 160,357,682 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329847
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,340,834 - 160,362,566 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329848
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,326,957 - 160,347,101 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329849
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,328,009 - 160,347,103 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329850
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,328,009 - 160,347,101 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329851
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,328,129 - 160,347,097 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329852
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,328,139 - 160,347,097 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329853
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,328,141 - 160,347,097 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329854
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,343,866 - 160,362,563 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329855
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,343,896 - 160,362,566 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329856
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,328,141 - 160,344,673 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329857
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,328,136 - 160,344,627 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329858
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,343,886 - 160,357,688 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329859
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,414,155 - 160,421,092 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329860
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,340,834 - 160,347,097 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329861
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,357,276 - 160,362,561 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329862
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,416,615 - 160,421,072 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329863
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,343,352 - 160,347,113 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329864
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,343,352 - 160,347,096 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329865
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,343,959 - 160,347,098 (-)Ensembl
Ensembl Acc Id: ENSMUST00000329866
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2160,419,636 - 160,421,094 (-)Ensembl
RefSeq Acc Id: XR_866918
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392160,409,540 - 160,421,512 (-)NCBI
GRCm382160,567,634 - 160,579,593 (-)NCBI
Sequence:
RefSeq Acc Id: XR_866919
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392160,409,540 - 160,422,689 (-)NCBI
GRCm382160,567,634 - 160,580,769 (-)NCBI
Sequence:


Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000078956 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000329822 ENTREZGENE
MGD MGI:3650696 ENTREZGENE
NCBI Gene Gm14221 ENTREZGENE
PhenoGen Gm14221 PhenoGen
RNAcentral URS0000A90A72 RNACentral
  URS0000AAAF58 RNACentral
  URS00025F1030 RNACentral