Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

Promoter : EPDNEW_M14677 (Ptprr_2) Mus musculus

Symbol: EPDNEW_M14677
Name: Ptprr_2
Type: multiple initiation site
Description: Mus musculus protein tyrosine phosphatase, receptor type, R ,transcript variant 3, mRNA.
Related Genes: Ptprr  
Source: EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
SO Acc Id: SO:0000170
Alternative Promoters: null; see also EPDNEW_M14673   EPDNEW_M14675   EPDNEW_M14676  
Experiment Methods: Single-end sequencing.
Position
Mouse AssemblyChrPosition (strand)Source
GRCm3810116,177,409 - 116,177,469EPDNEW


Region

Sequence
 
Template 
gactcggagtacagagagctttggtaacagttcctcggcacagaaaagcACAGAGCTCCC

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001161838 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001161840 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000020151 EPDNEW

 
RGD Object Information
RGD ID: 8673292
Created: 2014-07-03
Species: Mus musculus
Last Modified: 2025-02-11
Status: ACTIVE