Genomic Element Report - Rat Genome Database

Advanced Search (OLGA)

Symbol:

EPDNEW_H10531

Name:

SOD2_5

Type:

initiation region

Description:

superoxide dismutase 2

Related Genes:

SOD2

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

SO Acc Id:

SO:0000170

Alternative Promoters:

null; see also EPDNEW_H10532 EPDNEW_H10533 EPDNEW_H10534 EPDNEW_H10536 EPDNEW_H10538

Experiment Methods:

Single-end sequencing.; Paired-end sequencing.

Position

Human Assembly	Chr	Position (strand)	Source
GRCh38	6	159,681,587 - 159,681,647	EPDNEW

Region

Sequence


Template	tatatattggtttggcctgaaaggtgaagtggggtaggcagggggcgggCTTACAGGTTA

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001024465	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001024466	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001322814	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001322815	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001322816	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001322817	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001322820	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSG00000112096	EPDNEW

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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