Welcome
{{ username}}
Message Center
{{ messageCount }} Messages
Go to Message Center
Watched Genes
{{$index + 1}}.
{{ watchedObject.symbol }} (RGD ID:{{watchedObject.rgdId}})
Modify Subscription
Unsubscribe
Watched Ontology Terms
{{$index + 1}}.
{{ watchedTerm.term }} ({{watchedTerm.accId}})
Modify Subscription
Unsubscribe
{{gene.symbol}}:
{{ gene.description }}
×
Save List to My RGD
Create Name:
Description:
You must be logged in to use this feature
{{ loginError }}
{{ watchLinkText }}
Select categories you would like to watch. Updates to this gene will be sent to {{ username }}
{{geneWatchAttr}}
Analyze
Gene
Strain
QTL
List
×
Gene Annotator (Functional Annotation)
unavailable
Gene Annotator (Annotation Distribution)
unavailable
Variant Visualizer (Genomic Variants)
unavailble
Variant Visualizer (Genomic Variants)
unavailable
Gene Annotator (Functional Annotation)
Gene Annotator (Annotation Distribution)
Variant Visualizer (Genomic Variants)
InterViewer (Protein-Protein Interactions)
unavailable
Gviewer (Genome Viewer)
unavailable
Variant Visualizer (Damaging Variants) unavailble
Variant Visualizer (Damaging Variants)
unavailable
InterViewer (Protein-Protein Interactions)
GViewer (Genome Viewer)
Variant Visualizer (Damaging Variants)
Gene Annotator (Annotation Comparison)
unavailable
OLGA (Gene List Generator)
unavailable
Gene Annotator (Annotation Comparison)
OLGA (Gene List Generator)
Excel (Download)
MOET (Multi-Ontology Enrichement)
unavailable
GOLF (Gene-Ortholog Location Finder)
unavailable
MOET (Multi-Ontology Enrichement)
GOLF (Gene-Ortholog Location Finder)
x
Send Message
x
Send us a Message
Your email
Message
Send
Submit Data
|
Help
|
Video Tutorials
|
News
|
Publications
|
Download
|
REST API
|
Citing RGD
|
Contact
Home
Search RGD
Grant Resources
Citing RGD
About Us
Contact Us
Data
Genes
Variants
Community Projects
QTLs
Strains
Markers
Genome Information
Ontologies
Cell Lines
References
Download
Submit Data
Analysis & Visualization
OntoMate (Literature Search)
JBrowse (Genome Browser)
Synteny Browser (VCMap)
Variant Visualizer
Multi-Ontology Enrichment (MOET)
Gene-Ortholog Location Finder (GOLF)
InterViewer (Protein-Protein Interactions)
PhenoMiner (Quatitative Phenotypes)
Gene Annotator
OLGA (Gene List Generator)
AllianceMine
GViewer (Genome Viewer)
Diseases
Aging & Age-Related Disease
Cancer & Neoplastic Disease
Cardiovascular Disease
Coronavirus Disease
Developmental Disease
Diabetes
Hematologic Disease
Immune & Inflammatory Disease
Infectious Disease
Liver Disease
Neurological Disease
Obesity & Metabolic Syndrome
Renal Disease
Respiratory Disease
Sensory Organ Disease
Phenotypes & Models
Find Models
Genetic Models
Autism Models
Rat PhenoMiner (Quantitative Phenotypes)
Chinchilla PhenoMiner
Expected Ranges (Quantitative Phenotype)
PhenoMiner Term Comparison
Hybrid Rat Diversity Panel
Phenotypes
Phenotypes in Other Animal Models
Animal Husbandry
Strain Medical Records
Phylogenetics
Strain Availability
Calendar
Rats 101
Submissions
Photo Archive
Pathways
Community
Rat Community Forum
Directory of Rat Laboratories
Video Tutorials
News
RGD Publications
RGD Presentations Archive
Nomenclature Guidelines
Resource Links
Laboratory Resources
Employment Resources
Advanced Search (OLGA)
General
Promoter : EPDNEW_M21 (Sntg1_2) Mus musculus
Symbol:
EPDNEW_M21
Name:
Sntg1_2
Type:
single initiation site
Description:
Mus musculus syntrophin, gamma 1 , transcript variant 3, mRNA.
Related Genes:
Sntg1
Source:
EPDNEW (Eukaryotic Promoter Database,
http://epd.vital-it.ch/
)
SO Acc Id:
SO:0000170
Alternative Promoters:
null; see also
EPDNEW_M22
Experiment Methods:
Single-end sequencing.
Position
Mouse Assembly
Chr
Position (strand)
Source
GRCm38
1
8,792,220 - 8,792,280
EPDNEW
Region
Sequence
Template
gcaatttattagggaatatttaattaataagaaattagggctaggcggaCGTAGAGCCCC
Sequence
Nucleotide Sequences
3
5
10
20
30
100
All Rows
RefSeq Transcripts
NM_001290390
(Get FASTA)
NCBI Sequence Viewer
Search GEO for Microarray Profiles
NM_001290392
(Get FASTA)
NCBI Sequence Viewer
Search GEO for Microarray Profiles
NM_001290393
(Get FASTA)
NCBI Sequence Viewer
Search GEO for Microarray Profiles
NM_027671
(Get FASTA)
NCBI Sequence Viewer
Search GEO for Microarray Profiles
3
5
10
20
30
100
All Rows
Additional Information
External Database Links
3
5
10
20
40
100
All Rows
Database
Acc Id
Source(s)
Ensembl Genes
ENSMUSG00000025909
EPDNEW
3
5
10
20
40
100
All Rows
RGD Object Information
RGD ID:
6873140
Created:
2012-08-03
Species:
Mus musculus
Last Modified:
2024-11-19
Status:
ACTIVE