Genomic Element Report - Rat Genome Database

Advanced Search (OLGA)

Symbol:

EPDNEW_M21355

Name:

Eva1c_1

Type:

multiple initiation site

Description:

Mus musculus eva-1 homolog C , transcript variant 4, mRNA.

Related Genes:

Eva1c

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

SO Acc Id:

SO:0000170

Alternative Promoters:

null; see also EPDNEW_M21353 EPDNEW_M21354

Experiment Methods:

Single-end sequencing.

Position

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	16	90,831,137 - 90,831,197	EPDNEW

Region

Sequence


Template	ccgccccctccccttggctggggatcccggacccggcggcgaccgcctaAGAAGCTCCAG

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001199210	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001316760	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001316761	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_027627	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NR_133572	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NR_133573	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSMUSG00000039903	EPDNEW

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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