Eva1c (eva-1 homolog C) - Rat Genome Database

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Gene: Eva1c (eva-1 homolog C) Mus musculus
Analyze
Symbol: Eva1c
Name: eva-1 homolog C
RGD ID: 1552780
MGI Page MGI
Description: Predicted to enable heparin binding activity. Predicted to be located in plasma membrane. Predicted to colocalize with extracellular region. Is expressed in several structures, including alimentary system; genitourinary system; nervous system; respiratory system; and sensory organ. Orthologous to human EVA1C (eva-1 homolog C).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 1700092M14Rik; 4931408A02Rik; eva-1 homolog C (C. elegans); Fam176; Fam176c; hypothetical protein LOC70967; MGC117713; uncharacterized protein C21orf63 homolog
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391690,623,607 - 90,701,997 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1690,623,607 - 90,701,997 (+)EnsemblGRCm39 Ensembl
GRCm381690,826,719 - 90,905,109 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1690,826,719 - 90,905,109 (+)EnsemblGRCm38mm10GRCm38
MGSCv371690,831,358 - 90,904,940 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361690,715,578 - 90,793,968 (+)NCBIMGSCv36mm8
MGSCv361691,497,214 - 91,571,089 (+)NCBIMGSCv36mm8
Celera1691,912,329 - 91,986,753 (+)NCBICelera
Cytogenetic Map16C3.3NCBI
cM Map1652.02NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. A gene expression map of human chromosome 21 orthologues in the mouse. Gitton Y, etal., Nature 2002 Dec 5;420(6915):586-90.
2. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. From PREDs and open reading frames to cDNA isolation: revisiting the human chromosome 21 transcription map. Reymond A, etal., Genomics 2001 Nov;78(1-2):46-54.
6. Human chromosome 21 gene expression atlas in the mouse. Reymond A, etal., Nature 2002 Dec 5;420(6915):582-6.
7. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:12477932   PMID:14610273   PMID:14681479   PMID:16141072   PMID:16141073   PMID:17953485   PMID:20562862   PMID:21267068  
PMID:21873635   PMID:24040182   PMID:25122090   PMID:34170322  


Genomics

Comparative Map Data
Eva1c
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391690,623,607 - 90,701,997 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1690,623,607 - 90,701,997 (+)EnsemblGRCm39 Ensembl
GRCm381690,826,719 - 90,905,109 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1690,826,719 - 90,905,109 (+)EnsemblGRCm38mm10GRCm38
MGSCv371690,831,358 - 90,904,940 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361690,715,578 - 90,793,968 (+)NCBIMGSCv36mm8
MGSCv361691,497,214 - 91,571,089 (+)NCBIMGSCv36mm8
Celera1691,912,329 - 91,986,753 (+)NCBICelera
Cytogenetic Map16C3.3NCBI
cM Map1652.02NCBI
EVA1C
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382132,411,723 - 32,515,387 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2132,412,006 - 32,515,397 (+)EnsemblGRCh38hg38GRCh38
GRCh372133,784,031 - 33,887,697 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362132,706,623 - 32,809,568 (+)NCBINCBI36Build 36hg18NCBI36
Build 342132,706,622 - 32,809,568NCBI
Celera2118,968,379 - 19,071,327 (+)NCBICelera
Cytogenetic Map21q22.11NCBI
HuRef2119,193,621 - 19,296,983 (+)NCBIHuRef
CHM1_12133,346,618 - 33,449,422 (+)NCBICHM1_1
T2T-CHM13v2.02130,781,530 - 30,885,679 (+)NCBIT2T-CHM13v2.0
Eva1c
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81143,575,613 - 43,649,677 (+)NCBIGRCr8
mRatBN7.21130,089,510 - 30,163,596 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1130,089,365 - 30,163,596 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.01131,001,697 - 31,075,784 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1131,002,451 - 31,075,809 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01134,613,264 - 34,687,258 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41130,818,803 - 30,891,855 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11130,818,630 - 30,891,737 (+)NCBI
Celera1129,757,158 - 29,831,194 (+)NCBICelera
Cytogenetic Map11q11NCBI
Eva1c
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540731,934,965 - 32,044,228 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540731,934,954 - 32,043,827 (+)NCBIChiLan1.0ChiLan1.0
EVA1C
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22228,529,545 - 28,635,687 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12123,389,541 - 23,492,275 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02118,778,766 - 18,881,877 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12132,160,420 - 32,260,968 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2132,160,420 - 32,260,968 (+)Ensemblpanpan1.1panPan2
EVA1C
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13127,176,246 - 27,256,810 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3127,177,136 - 27,256,293 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3127,171,143 - 27,250,014 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03127,296,662 - 27,376,978 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3127,297,414 - 27,376,467 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13127,241,798 - 27,321,809 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03127,253,329 - 27,333,645 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03127,760,871 - 27,840,881 (+)NCBIUU_Cfam_GSD_1.0
Eva1c
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440497127,764,993 - 27,847,927 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365009,619,904 - 9,702,356 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365009,621,221 - 9,704,793 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EVA1C
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13196,067,669 - 196,173,198 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113196,067,643 - 196,172,673 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213206,114,917 - 206,184,980 (+)NCBISscrofa10.2Sscrofa10.2susScr3
EVA1C
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1259,612,527 - 59,717,315 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl259,611,890 - 59,716,572 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660712,149,759 - 2,258,262 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Eva1c
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474520,747,018 - 20,835,259 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474520,746,101 - 20,835,142 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Eva1c
3162 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1598
Count of miRNA genes:520
Interacting mature miRNAs:646
Transcripts:ENSMUST00000037539, ENSMUST00000099543, ENSMUST00000099548, ENSMUST00000130868, ENSMUST00000138064, ENSMUST00000152223, ENSMUST00000154180
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1302194Pgia10_mproteoglycan induced arthritis 10 (mouse)Not determined166860072298008968Mouse
26884376Skwq4_mskull length QTL 4, 5 week (mouse)16841786490896888Mouse
1302096Aod1a_mautoimmune ovarian dysgenesis 1a (mouse)Not determined163544664392573008Mouse
1558740Bpq9_mblood pressure QTL 9 (mouse)Not determined166332733697327472Mouse
4141113Tgq28_mtriglyceride QTL 28 (mouse)Not determined6298664696986646Mouse
4142262Lmr18_mleishmaniasis resistance 18 (mouse)Not determined166912761198008968Mouse
11049573Lmr18b_mleishmaniasis resistance 18b (mouse)166912761198008968Mouse
1301598Renf2_mrenal failure 2 (mouse)Not determined167038025298008968Mouse
11049574Lmr18a_mleishmaniasis resistance 18a (mouse)166912761198008968Mouse
11522753Cocia19_mcocaine-induced activity, QTL 19 (mouse)166925448298008968Mouse
1300928Etia_methanol induced activation (mouse)Not determined166331390797314016Mouse
1301125Sluc27_msusceptibility to lung cancer 27 (mouse)Not determined166160864495608764Mouse
1301032Tauph_mtau phosphorylation (mouse)Not determined166907613298008968Mouse

Markers in Region
4931408A02Rik  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map16C3.3UniSTS
cM Map16 UniSTS
cM Map1652.02UniSTS
4931408A02Rik  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map16C3.3UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001199210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001316760 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001316761 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_027627 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_133572 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_133573 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006523085 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317131 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317132 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030249282 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC134560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF358257 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK007044 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK016443 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK037486 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC100350 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC132305 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC144751 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC157969 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000037539   ⟹   ENSMUSP00000036695
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1690,627,747 - 90,701,773 (+)Ensembl
GRCm38.p6 Ensembl1690,830,859 - 90,904,885 (+)Ensembl
Ensembl Acc Id: ENSMUST00000099543   ⟹   ENSMUSP00000097141
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1690,628,001 - 90,701,583 (+)Ensembl
GRCm38.p6 Ensembl1690,831,113 - 90,904,695 (+)Ensembl
Ensembl Acc Id: ENSMUST00000099548   ⟹   ENSMUSP00000097145
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1690,623,634 - 90,701,586 (+)Ensembl
GRCm38.p6 Ensembl1690,826,746 - 90,904,698 (+)Ensembl
Ensembl Acc Id: ENSMUST00000130868   ⟹   ENSMUSP00000121430
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1690,627,696 - 90,701,997 (+)Ensembl
GRCm38.p6 Ensembl1690,830,808 - 90,905,109 (+)Ensembl
Ensembl Acc Id: ENSMUST00000138064
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1690,623,607 - 90,626,496 (+)Ensembl
GRCm38.p6 Ensembl1690,826,719 - 90,829,608 (+)Ensembl
Ensembl Acc Id: ENSMUST00000152223   ⟹   ENSMUSP00000119510
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1690,627,755 - 90,701,773 (+)Ensembl
GRCm38.p6 Ensembl1690,830,867 - 90,904,885 (+)Ensembl
Ensembl Acc Id: ENSMUST00000154180   ⟹   ENSMUSP00000119830
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1690,643,286 - 90,687,503 (+)Ensembl
GRCm38.p6 Ensembl1690,846,398 - 90,890,615 (+)Ensembl
Ensembl Acc Id: ENSMUST00000231280   ⟹   ENSMUSP00000156225
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1690,627,876 - 90,701,773 (+)Ensembl
GRCm38.p6 Ensembl1690,830,988 - 90,904,885 (+)Ensembl
Ensembl Acc Id: ENSMUST00000232274
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1690,623,607 - 90,701,583 (+)Ensembl
GRCm38.p6 Ensembl1690,826,719 - 90,904,695 (+)Ensembl
Ensembl Acc Id: ENSMUST00000232665
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1690,623,607 - 90,701,583 (+)Ensembl
GRCm38.p6 Ensembl1690,826,719 - 90,904,695 (+)Ensembl
RefSeq Acc Id: NM_001199210   ⟹   NP_001186139
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391690,627,747 - 90,701,997 (+)NCBI
GRCm381690,830,859 - 90,905,109 (+)NCBI
Celera1691,912,075 - 91,986,943 (+)ENTREZGENE
cM Map16 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001316760   ⟹   NP_001303689
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391690,623,607 - 90,701,997 (+)NCBI
GRCm381690,826,719 - 90,905,109 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001316761   ⟹   NP_001303690
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391690,627,747 - 90,701,997 (+)NCBI
GRCm381690,830,859 - 90,905,109 (+)NCBI
Sequence:
RefSeq Acc Id: NM_027627   ⟹   NP_081903
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391690,627,747 - 90,701,997 (+)NCBI
GRCm381690,830,859 - 90,905,109 (+)NCBI
MGSCv371690,831,358 - 90,904,940 (+)RGD
Celera1691,912,075 - 91,986,943 (+)ENTREZGENE
cM Map16 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_133572
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391690,627,747 - 90,701,997 (+)NCBI
GRCm381690,830,859 - 90,905,109 (+)NCBI
Sequence:
RefSeq Acc Id: NR_133573
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391690,627,747 - 90,701,997 (+)NCBI
GRCm381690,830,859 - 90,905,109 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006523085   ⟹   XP_006523148
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391690,626,967 - 90,701,583 (+)NCBI
GRCm381690,830,077 - 90,904,695 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017317131   ⟹   XP_017172620
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391690,623,730 - 90,701,583 (+)NCBI
GRCm381690,826,842 - 90,904,695 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017317132   ⟹   XP_017172621
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391690,628,354 - 90,701,583 (+)NCBI
GRCm381690,831,466 - 90,904,695 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030249282   ⟹   XP_030105142
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391690,626,970 - 90,701,583 (+)NCBI
GRCm381690,830,079 - 90,904,695 (+)NCBI
Sequence:
RefSeq Acc Id: NP_081903   ⟸   NM_027627
- Peptide Label: isoform 2
- UniProtKB: P58659 (UniProtKB/Swiss-Prot),   Q8CAX0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001186139   ⟸   NM_001199210
- Peptide Label: isoform 1 precursor
- UniProtKB: Q497W3 (UniProtKB/Swiss-Prot),   A2RSZ2 (UniProtKB/Swiss-Prot),   Q9D4L3 (UniProtKB/Swiss-Prot),   P58659 (UniProtKB/Swiss-Prot),   A0A384DV69 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006523148   ⟸   XM_006523085
- Peptide Label: isoform X1
- UniProtKB: A0A384DV69 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001303689   ⟸   NM_001316760
- Peptide Label: isoform 3
- UniProtKB: B2RXT2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017172620   ⟸   XM_017317131
- Peptide Label: isoform X2
- UniProtKB: B2RXT2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001303690   ⟸   NM_001316761
- Peptide Label: isoform 4
- UniProtKB: A0A338P750 (UniProtKB/TrEMBL),   B2RXT2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017172621   ⟸   XM_017317132
- Peptide Label: isoform X2
- UniProtKB: B2RXT2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030105142   ⟸   XM_030249282
- Peptide Label: isoform X3
- UniProtKB: B2RXT2 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSMUSP00000121430   ⟸   ENSMUST00000130868
Ensembl Acc Id: ENSMUSP00000097145   ⟸   ENSMUST00000099548
Ensembl Acc Id: ENSMUSP00000097141   ⟸   ENSMUST00000099543
Ensembl Acc Id: ENSMUSP00000156225   ⟸   ENSMUST00000231280
Ensembl Acc Id: ENSMUSP00000119510   ⟸   ENSMUST00000152223
Ensembl Acc Id: ENSMUSP00000036695   ⟸   ENSMUST00000037539
Ensembl Acc Id: ENSMUSP00000119830   ⟸   ENSMUST00000154180
Protein Domains
EVA1   SUEL-type lectin

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P58659-F1-model_v2 AlphaFold P58659 1-440 view protein structure

Promoters
RGD ID:13674408
Promoter ID:EPDNEW_M21353
Type:multiple initiation site
Name:Eva1c_3
Description:Mus musculus eva-1 homolog C , transcript variant 4, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M21354  EPDNEW_M21355  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381690,826,748 - 90,826,808EPDNEW
RGD ID:6826684
Promoter ID:MM_KWN:21662
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Kidney,   Lung,   MEF_B4,   Spleen
Transcripts:ENSMUST00000037539,   ENSMUST00000099543,   OTTMUST00000047483,   OTTMUST00000084943
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361690,830,226 - 90,831,222 (+)MPROMDB
RGD ID:13674410
Promoter ID:EPDNEW_M21354
Type:initiation region
Name:Eva1c_2
Description:Mus musculus eva-1 homolog C , transcript variant 4, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M21353  EPDNEW_M21355  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381690,830,860 - 90,830,920EPDNEW
RGD ID:13674412
Promoter ID:EPDNEW_M21355
Type:multiple initiation site
Name:Eva1c_1
Description:Mus musculus eva-1 homolog C , transcript variant 4, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M21353  EPDNEW_M21354  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381690,831,137 - 90,831,197EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1918217 AgrOrtholog
Ensembl Genes ENSMUSG00000039903 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000037539 ENTREZGENE
  ENSMUST00000037539.15 UniProtKB/Swiss-Prot
  ENSMUST00000099543 ENTREZGENE
  ENSMUST00000099543.10 UniProtKB/Swiss-Prot
  ENSMUST00000099548.10 UniProtKB/TrEMBL
  ENSMUST00000130868 ENTREZGENE
  ENSMUST00000130868.8 UniProtKB/TrEMBL
  ENSMUST00000152223 ENTREZGENE
  ENSMUST00000152223.3 UniProtKB/TrEMBL
  ENSMUST00000154180.2 UniProtKB/TrEMBL
  ENSMUST00000231280 ENTREZGENE
  ENSMUST00000231280.2 UniProtKB/TrEMBL
  ENSMUST00000232665 ENTREZGENE
Gene3D-CATH 2.60.120.740 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro EVA1_cell_death_regulators UniProtKB/TrEMBL
  EVA1_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Lectin_gal-bd_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Lectin_gal-bd_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:70967 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1918217 ENTREZGENE
NCBI Gene 70967 ENTREZGENE
PANTHER L-RHAMNOSE-BINDING LECTIN CSL2-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN EVA-1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN EVA-1 HOMOLOG A UniProtKB/TrEMBL
  PROTEIN EVA-1 HOMOLOG B-RELATED UniProtKB/TrEMBL
  PROTEIN EVA-1 HOMOLOG C UniProtKB/TrEMBL
Pfam FAM176 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Gal_Lectin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Eva1c PhenoGen
PROSITE SUEL_LECTIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A338P750 ENTREZGENE, UniProtKB/TrEMBL
  A0A384DV69 ENTREZGENE, UniProtKB/TrEMBL
  A2RSZ2 ENTREZGENE
  B2RXT2 ENTREZGENE, UniProtKB/TrEMBL
  D3Z1H0_MOUSE UniProtKB/TrEMBL
  D6RCJ7_MOUSE UniProtKB/TrEMBL
  EVA1C_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q497W3 ENTREZGENE
  Q8CAX0 ENTREZGENE, UniProtKB/TrEMBL
  Q9D4L3 ENTREZGENE
UniProt Secondary A2RSZ2 UniProtKB/Swiss-Prot
  Q497W3 UniProtKB/Swiss-Prot
  Q9D4L3 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-06-27 Eva1c  eva-1 homolog C  Eva1c  eva-1 homolog C (C. elegans)  Symbol and/or name change 5135510 APPROVED
2012-11-27 Eva1c  eva-1 homolog C (C. elegans)  4931408A02Rik  RIKEN cDNA 4931408A02 gene  Symbol and/or name change 5135510 APPROVED