Welcome
{{ username}}
Message Center
{{ messageCount }} Messages
Go to Message Center
Watched Genes
{{$index + 1}}.
{{ watchedObject.symbol }} (RGD ID:{{watchedObject.rgdId}})
Modify Subscription
Unsubscribe
Watched Ontology Terms
{{$index + 1}}.
{{ watchedTerm.term }} ({{watchedTerm.accId}})
Modify Subscription
Unsubscribe
{{gene.symbol}}:
{{ gene.description }}
×
Save List to My RGD
Create Name:
Description:
You must be logged in to use this feature
{{ loginError }}
{{ watchLinkText }}
Select categories you would like to watch. Updates to this gene will be sent to {{ username }}
{{geneWatchAttr}}
Analyze
Gene
Strain
QTL
List
×
Gene Annotator (Functional Annotation)
unavailable
Gene Annotator (Annotation Distribution)
unavailable
Variant Visualizer (Genomic Variants)
unavailble
Variant Visualizer (Genomic Variants)
unavailable
Gene Annotator (Functional Annotation)
Gene Annotator (Annotation Distribution)
Variant Visualizer (Genomic Variants)
InterViewer (Protein-Protein Interactions)
unavailable
Gviewer (Genome Viewer)
unavailable
Variant Visualizer (Damaging Variants) unavailble
Variant Visualizer (Damaging Variants)
unavailable
InterViewer (Protein-Protein Interactions)
GViewer (Genome Viewer)
Variant Visualizer (Damaging Variants)
Gene Annotator (Annotation Comparison)
unavailable
OLGA (Gene List Generator)
unavailable
Gene Annotator (Annotation Comparison)
OLGA (Gene List Generator)
Excel (Download)
MOET (Multi-Ontology Enrichement)
unavailable
GOLF (Gene-Ortholog Location Finder)
unavailable
MOET (Multi-Ontology Enrichement)
GOLF (Gene-Ortholog Location Finder)
x
Send Message
x
Send us a Message
Your email
Message
Send
Submit Data
|
Help
|
Video Tutorials
|
News
|
Publications
|
Download
|
REST API
|
Citing RGD
|
Contact
Home
Search RGD
Grant Resources
Citing RGD
About Us
Contact Us
Data
Genes
Variants
Community Projects
QTLs
Strains
Markers
Genome Information
Ontologies
Cell Lines
References
Download
Submit Data
Analysis & Visualization
OntoMate (Literature Search)
JBrowse (Genome Browser)
Synteny Browser (VCMap)
Variant Visualizer
Multi-Ontology Enrichment (MOET)
Gene-Ortholog Location Finder (GOLF)
InterViewer (Protein-Protein Interactions)
PhenoMiner (Quatitative Phenotypes)
Gene Annotator
OLGA (Gene List Generator)
AllianceMine
GViewer (Genome Viewer)
Diseases
Aging & Age-Related Disease
Cancer & Neoplastic Disease
Cardiovascular Disease
Coronavirus Disease
Developmental Disease
Diabetes
Hematologic Disease
Immune & Inflammatory Disease
Infectious Disease
Liver Disease
Neurological Disease
Obesity & Metabolic Syndrome
Renal Disease
Respiratory Disease
Sensory Organ Disease
Phenotypes & Models
Find Models
Genetic Models
Autism Models
Rat PhenoMiner (Quantitative Phenotypes)
Chinchilla PhenoMiner
Expected Ranges (Quantitative Phenotype)
PhenoMiner Term Comparison
Hybrid Rat Diversity Panel
Phenotypes
Phenotypes in Other Animal Models
Animal Husbandry
Strain Medical Records
Phylogenetics
Strain Availability
Calendar
Rats 101
Submissions
Photo Archive
Pathways
Community
Rat Community Forum
Directory of Rat Laboratories
Video Tutorials
News
RGD Publications
RGD Presentations Archive
Nomenclature Guidelines
Resource Links
Laboratory Resources
Employment Resources
Advanced Search (OLGA)
View As List
View As Table
GENE - TERM ANNOTATION REPORT
2 Annotations Found.
An association has been curated linking
Ptpn11
and
high grade glioma
in Rattus norvegicus.
The association was
inferred from sequence orthology
(ISO)
The annotation was made from
RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
The annotation has been inferred from sequence orthology with
PTPN11 (Homo sapiens)
[(IAGP) inferred by association of genotype and phenotype]
636
RGD objects have been annotated to
high grade glioma
(DOID:3070)
65
papers in RGD have been used to annotate
Ptpn11
Curation Notes: ClinVar Annotator: match by term: Astrocytoma
Original References(s):
PMID:11704759
PMID:12634870
PMID:12717436
PMID:14644997
PMID:14974085
PMID:14982869
PMID:15385933
PMID:15710330
PMID:15834506
PMID:15842656
PMID:15928039
PMID:16358218
PMID:16518851
PMID:16830086
PMID:17177198
PMID:17942397
PMID:17972951
PMID:18470943
PMID:18559669
PMID:18678287
PMID:19047918
PMID:19179468
PMID:19509418
PMID:19798502
PMID:21901340
PMID:21930766
PMID:22190897
PMID:23756559
PMID:23825065
PMID:23832011
PMID:24033266
PMID:25097206
PMID:25395418
PMID:26619011
PMID:26783207
PMID:27069254
PMID:27276561
PMID:27783593
PMID:28098151
PMID:28492532
PMID:32561839
PMID:36349709
An association has been curated linking
Ptpn11
and
high grade glioma
in Rattus norvegicus.
The association was
inferred from sequence orthology
(ISO)
The annotation was made from
RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
The annotation has been inferred from sequence orthology with
PTPN11 (Homo sapiens)
[(IAGP) inferred by association of genotype and phenotype]
636
RGD objects have been annotated to
high grade glioma
(DOID:3070)
65
papers in RGD have been used to annotate
Ptpn11
Curation Notes: ClinVar Annotator: match by term: Astrocytoma | ClinVar Annotator: match by term: Glioma susceptibility 9
Original References(s):
PMID:11704759
PMID:12634870
PMID:12717436
PMID:14644997
PMID:14974085
PMID:14982869
PMID:15385933
PMID:15710330
PMID:15834506
PMID:15842656
PMID:15928039
PMID:16358218
PMID:16518851
PMID:16830086
PMID:17177198
PMID:17942397
PMID:17972951
PMID:18470943
PMID:18559669
PMID:18678287
PMID:19047918
PMID:19179468
PMID:19509418
PMID:19798502
PMID:21901340
PMID:21930766
PMID:22190897
PMID:23756559
PMID:23825065
PMID:23832011
PMID:24033266
PMID:25097206
PMID:25395418
PMID:25741868
PMID:26619011
PMID:26783207
PMID:27069254
PMID:27276561
PMID:27783593
PMID:28098151
PMID:28492532
PMID:32561839
PMID:36349709
Go Back to source page
Continue to Ontology report