Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

GENE - TERM ANNOTATION REPORT

6 Annotations Found.

An association has been curated linking Irf4 and chronic lymphocytic leukemia in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Allan JM, etal., Leukemia. 2010 Apr;24(4):877-81. doi: 10.1038/leu.2009.298. Epub 2010 Jan 21.
  • The annotation has been inferred from sequence orthology with IRF4 (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 2 additional annotations were made from Allan JM, etal., Leukemia. 2010 Apr;24(4):877-81. doi: 10.1038/leu.2009.298. Epub 2010 Jan 21.
  • 90 RGD objects have been annotated to chronic lymphocytic leukemia  (DOID:1040)
  • 31 papers in RGD have been used to annotate Irf4
  • Qualifier: disease_progression


    • An association has been curated linking Irf4 and chronic lymphocytic leukemia in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Shukla V, etal., Blood. 2013 Oct 17;122(16):2848-55. doi: 10.1182/blood-2013-03-492769. Epub 2013 Aug 7.
  • The annotation has been inferred from sequence orthology with Irf4 (Mus musculus) [(IMP) inferred from mutant phenotype]
  • 2 additional annotations were made from Shukla V, etal., Blood. 2013 Oct 17;122(16):2848-55. doi: 10.1182/blood-2013-03-492769. Epub 2013 Aug 7.
  • 90 RGD objects have been annotated to chronic lymphocytic leukemia  (DOID:1040)
  • 31 papers in RGD have been used to annotate Irf4


    • An association has been curated linking Irf4 and chronic lymphocytic leukemia in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Ma S, etal., J Biol Chem. 2013 Sep 13;288(37):26430-40. doi: 10.1074/jbc.M113.475913. Epub 2013 Jul 29.
  • The annotation has been inferred from sequence orthology with Irf4 (Mus musculus) [(IMP) inferred from mutant phenotype]
  • 2 additional annotations were made from Ma S, etal., J Biol Chem. 2013 Sep 13;288(37):26430-40. doi: 10.1074/jbc.M113.475913. Epub 2013 Jul 29.
  • 90 RGD objects have been annotated to chronic lymphocytic leukemia  (DOID:1040)
  • 31 papers in RGD have been used to annotate Irf4
  • Qualifier: disease_progression


    • An association has been curated linking Irf4 and chronic lymphocytic leukemia in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Havelange V, etal., Blood. 2011 Sep 8;118(10):2827-9. doi: 10.1182/blood-2011-04-350579. Epub 2011 Jul 25.
  • The annotation has been inferred from sequence orthology with IRF4 (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 2 additional annotations were made from Havelange V, etal., Blood. 2011 Sep 8;118(10):2827-9. doi: 10.1182/blood-2011-04-350579. Epub 2011 Jul 25.
  • 90 RGD objects have been annotated to chronic lymphocytic leukemia  (DOID:1040)
  • 31 papers in RGD have been used to annotate Irf4
  • Curation Notes: DNA:missense mutation:exon:p.L116R (human)


    • An association has been curated linking Irf4 and chronic lymphocytic leukemia in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Crowther-Swanepoel D, etal., Hum Mol Genet. 2010 May 1;19(9):1840-5. doi: 10.1093/hmg/ddq044. Epub 2010 Feb 1.
  • The annotation has been inferred from sequence orthology with IRF4 (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 2 additional annotations were made from Crowther-Swanepoel D, etal., Hum Mol Genet. 2010 May 1;19(9):1840-5. doi: 10.1093/hmg/ddq044. Epub 2010 Feb 1.
  • 90 RGD objects have been annotated to chronic lymphocytic leukemia  (DOID:1040)
  • 31 papers in RGD have been used to annotate Irf4
  • Curation Notes: DNA:SNPs:3' utr:multiple


    • An association has been curated linking Irf4 and chronic lymphocytic leukemia in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Lan Q, etal., Eur J Haematol. 2010 Dec;85(6):492-5. doi: 10.1111/j.1600-0609.2010.01518.x.
  • The annotation has been inferred from sequence orthology with IRF4 (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 2 additional annotations were made from Lan Q, etal., Eur J Haematol. 2010 Dec;85(6):492-5. doi: 10.1111/j.1600-0609.2010.01518.x.
  • 90 RGD objects have been annotated to chronic lymphocytic leukemia  (DOID:1040)
  • 31 papers in RGD have been used to annotate Irf4
  • Curation Notes: DNA:SNP: :rs872071 (human)


    • Go Back to source page   Continue to Ontology report