Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

GENE - TERM ANNOTATION REPORT

8 Annotations Found.

An association has been curated linking C2 and macular degeneration in Pan paniscus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Automated assignment of GO, PW and RDO ISO annotations across species
  • The annotation has been inferred from sequence orthology with C2 (Homo sapiens)
  • 156 RGD objects have been annotated to macular degeneration  (DOID:4448)
  • 0 papers in RGD have been used to annotate C2
  • Qualifier: no_association
  • Curation Notes: DNA:missense mutation:cds:p.E318D (rs9332739) (human)
  • Original References(s): PMID:19169232 PMID:23112567 REF_RGD_ID:7411691 REF_RGD_ID:7411693


    • An association has been curated linking C2 and macular degeneration in Pan paniscus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Automated assignment of GO, PW and RDO ISO annotations across species
  • The annotation has been inferred from sequence orthology with C2 (Homo sapiens)
  • 156 RGD objects have been annotated to macular degeneration  (DOID:4448)
  • 0 papers in RGD have been used to annotate C2
  • Qualifier: susceptibility
  • Curation Notes: DNA:SNP, haplotype:intron:c.1360+62G>T (rs547154) (human)
  • Original References(s): PMID:18806293 REF_RGD_ID:7411713


    • An association has been curated linking C2 and macular degeneration in Pan paniscus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Automated assignment of GO, PW and RDO ISO annotations across species
  • The annotation has been inferred from sequence orthology with C2 (Homo sapiens)
  • 156 RGD objects have been annotated to macular degeneration  (DOID:4448)
  • 0 papers in RGD have been used to annotate C2
  • Qualifier: no_association
  • Curation Notes: DNA:missense mutation, snp:cds, intron:p.E318D, c.1360+62G>T (rs9332739, rs547154) (human)
  • Original References(s): PMID:22273503 REF_RGD_ID:7411731


    • An association has been curated linking C2 and macular degeneration in Pan paniscus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Automated assignment of GO, PW and RDO ISO annotations across species
  • The annotation has been inferred from sequence orthology with C2 (Homo sapiens)
  • 156 RGD objects have been annotated to macular degeneration  (DOID:4448)
  • 0 papers in RGD have been used to annotate C2
  • Qualifier: susceptibility
  • Curation Notes: DNA:missense mutation, haplotype:cds:p.E318D (rs9332739) (human)
  • Original References(s): PMID:23233260 REF_RGD_ID:7411720


    • An association has been curated linking C2 and macular degeneration in Pan paniscus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Automated assignment of GO, PW and RDO ISO annotations across species
  • The annotation has been inferred from sequence orthology with C2 (Homo sapiens)
  • 156 RGD objects have been annotated to macular degeneration  (DOID:4448)
  • 0 papers in RGD have been used to annotate C2
  • Qualifier: susceptibility
  • Curation Notes: DNA:SNP:intron:c.1360+62G>T (rs547154) (human)
  • Original References(s): PMID:22232432 REF_RGD_ID:7411694


    • An association has been curated linking C2 and macular degeneration in Pan paniscus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Automated assignment of GO, PW and RDO ISO annotations across species
  • The annotation has been inferred from sequence orthology with C2 (Homo sapiens)
  • 156 RGD objects have been annotated to macular degeneration  (DOID:4448)
  • 0 papers in RGD have been used to annotate C2
  • Qualifier: susceptibility
  • Curation Notes: DNA:polymorphism
  • Original References(s): PMID:16518403 REF_RGD_ID:1600582


    • An association has been curated linking C2 and macular degeneration in Pan paniscus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
  • The annotation has been inferred from sequence orthology with C2 (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 156 RGD objects have been annotated to macular degeneration  (DOID:4448)
  • 0 papers in RGD have been used to annotate C2
  • Curation Notes: ClinVar Annotator: match by term: Macular degeneration
  • Original References(s): PMID:16518403 PMID:16936732 PMID:17576681 PMID:18806293 PMID:20108004 PMID:20513133 PMID:21541267 PMID:22440158 PMID:2249879 PMID:24033266 PMID:24652797 PMID:25741868 PMID:28492532 PMID:6308626 PMID:8181962 PMID:9536098


    • An association has been curated linking C2 and macular degeneration in Pan paniscus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
  • The annotation has been inferred from sequence orthology with C2 (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 156 RGD objects have been annotated to macular degeneration  (DOID:4448)
  • 0 papers in RGD have been used to annotate C2
  • Curation Notes: ClinVar Annotator: match by term: Macular degeneration
  • Original References(s): PMID:1577763 PMID:16199547 PMID:16518403 PMID:16936732 PMID:17576681 PMID:18806293 PMID:20108004 PMID:20513133 PMID:21541267 PMID:22440158 PMID:2249879 PMID:24033266 PMID:24652797 PMID:25741868 PMID:28492532 PMID:35753512 PMID:6308626 PMID:8181962 PMID:9536098 PMID:9616367


    • Go Back to source page   Continue to Ontology report