ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of DNA methylation
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Accession:GO:0044030 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of the covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine.


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regulation of DNA methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Brca1 BRCA1, DNA repair associated JBrowse link 10 89,394,821 89,455,093 RGD:1624291
G Ehmt2 euchromatic histone lysine methyltransferase 2 JBrowse link 20 4,576,033 4,592,980 RGD:9588218
G Ftx FTX transcript, XIST regulator JBrowse link X 74,440,265 74,484,164 RGD:1624291
G Grhl2 grainyhead-like transcription factor 2 JBrowse link 7 76,058,623 76,197,360 RGD:1624291
RGD:1600115
G H1foo H1 histone family, member O, oocyte-specific JBrowse link 4 147,844,658 147,849,779 RGD:1624291
RGD:13792537
RGD:1600115
G Kdm1b lysine demethylase 1B JBrowse link 17 17,987,972 18,028,808 RGD:1624291
RGD:1600115
G Mbd1 methyl-CpG binding domain protein 1 JBrowse link 18 70,248,568 70,263,190 RGD:9588647
G Mbd2 methyl-CpG binding domain protein 2 JBrowse link 18 65,814,026 65,885,115 RGD:9588647
G Mbd3 methyl-CpG binding domain protein 3 JBrowse link 7 12,179,046 12,186,251 RGD:9588647
G Mecp2 methyl CpG binding protein 2 JBrowse link X 156,650,389 156,713,813 RGD:9588647
G Mis18a MIS18 kinetochore protein A JBrowse link 11 30,880,231 30,893,262 RGD:1624291
G Mphosph8 M-phase phosphoprotein 8 JBrowse link 15 36,918,843 36,946,712 RGD:1624291
RGD:1600115
G Parp1 poly (ADP-ribose) polymerase 1 JBrowse link 13 98,857,255 98,889,444 RGD:10413908
G Prdm14 PR/SET domain 14 JBrowse link 5 5,710,076 5,730,560 RGD:1624291
RGD:1600115
G Prmt5 protein arginine methyltransferase 5 JBrowse link 15 33,156,508 33,165,893 RGD:9491827
G Rlf rearranged L-myc fusion JBrowse link 5 140,107,144 140,162,698 RGD:1624291
RGD:1600115
G Tet1 tet methylcytosine dioxygenase 1 JBrowse link 20 27,359,122 27,438,039 RGD:1624291
G Zmpste24 zinc metallopeptidase STE24 JBrowse link 5 139,982,404 140,015,541 RGD:1624291
DNA hypermethylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnmt1 DNA methyltransferase 1 JBrowse link 8 21,922,515 21,968,495 RGD:9588311
G Morc1 MORC family CW-type zinc finger 1 JBrowse link 11 54,762,654 55,044,581 RGD:1624291
RGD:1600115
hypermethylation of CpG island term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnmt3a DNA methyltransferase 3 alpha JBrowse link 6 28,205,375 28,346,052 RGD:1624291
G Gsk3a glycogen synthase kinase 3 alpha JBrowse link 1 82,097,244 82,108,238 RGD:1624291
RGD:1600115
G Gsk3b glycogen synthase kinase 3 beta JBrowse link 11 65,060,884 65,208,842 RGD:1624291
G Spi1 Spi-1 proto-oncogene JBrowse link 3 79,918,127 79,937,708 RGD:1624291
RGD:1600115
hypomethylation of CpG island term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha JBrowse link 2 118,831,350 118,861,456 RGD:1624291
G Zmpste24 zinc metallopeptidase STE24 JBrowse link 5 139,982,404 140,015,541 RGD:1624291
RGD:1600115
negative regulation of DNA methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnmt3l DNA methyltransferase 3 like JBrowse link 20 11,344,513 11,359,090 RGD:1624291
RGD:1600115
G Kmt2a lysine methyltransferase 2A JBrowse link 8 49,110,407 49,185,872 RGD:1624291
positive regulation of DNA methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnmt3l DNA methyltransferase 3 like JBrowse link 20 11,344,513 11,359,090 RGD:1624291
RGD:1600115
G Mecp2 methyl CpG binding protein 2 JBrowse link X 156,650,389 156,713,813 RGD:1624291
RGD:1600115
G Myc MYC proto-oncogene, bHLH transcription factor JBrowse link 7 102,586,313 102,591,240 RGD:1624291
G Wt1 Wilms tumor 1 JBrowse link 3 95,133,221 95,180,574 RGD:1624291
protection of DNA demethylation of female pronucleus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dppa3 developmental pluripotency-associated 3 JBrowse link 4 155,437,675 155,441,059 RGD:1600115
RGD:13792537
RGD:1624291
G Dppa3l1 developmental pluripotency associated 3-like 1 JBrowse link 8 60,683,180 60,683,658 RGD:13792537

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17758
    regulation of biological process 11855
      regulation of metabolic process 6071
        regulation of macromolecule metabolic process 5592
          regulation of DNA metabolic process 444
            regulation of DNA methylation 31
              DNA hypermethylation + 6
              DNA hypomethylation + 2
              negative regulation of DNA methylation 2
              positive regulation of DNA methylation 4
              protection of DNA demethylation of female pronucleus 2
Path 2
Term Annotations click to browse term
  biological_process 17758
    metabolic process 10589
      cellular metabolic process 9699
        cellular aromatic compound metabolic process 5210
          nucleobase-containing compound metabolic process 5010
            nucleic acid metabolic process 4445
              DNA metabolic process 905
                DNA modification 95
                  DNA alkylation 68
                    DNA methylation 68
                      regulation of DNA methylation 31
                        DNA hypermethylation + 6
                        DNA hypomethylation + 2
                        negative regulation of DNA methylation 2
                        positive regulation of DNA methylation 4
                        protection of DNA demethylation of female pronucleus 2
paths to the root