Welcome
{{ username}}
Message Center
{{ messageCount }} Messages
Go to Message Center
Watched Genes
{{$index + 1}}.
{{ watchedObject.symbol }} (RGD ID:{{watchedObject.rgdId}})
Modify Subscription
Unsubscribe
Watched Ontology Terms
{{$index + 1}}.
{{ watchedTerm.term }} ({{watchedTerm.accId}})
Modify Subscription
Unsubscribe
{{gene.symbol}}:
{{ gene.description }}
×
Save List to My RGD
Create Name:
Description:
You must be logged in to use this feature
{{ loginError }}
{{ watchLinkText }}
Select categories you would like to watch. Updates to this gene will be sent to {{ username }}
{{geneWatchAttr}}
Analyze
Gene
Strain
QTL
List
×
Gene Annotator (Functional Annotation)
unavailable
Gene Annotator (Annotation Distribution)
unavailable
Variant Visualizer (Genomic Variants)
unavailble
Variant Visualizer (Genomic Variants)
unavailable
Gene Annotator (Functional Annotation)
Gene Annotator (Annotation Distribution)
Variant Visualizer (Genomic Variants)
InterViewer (Protein-Protein Interactions)
unavailable
Gviewer (Genome Viewer)
unavailable
Variant Visualizer (Damaging Variants) unavailble
Variant Visualizer (Damaging Variants)
unavailable
InterViewer (Protein-Protein Interactions)
GViewer (Genome Viewer)
Variant Visualizer (Damaging Variants)
Gene Annotator (Annotation Comparison)
unavailable
OLGA (Gene List Generator)
unavailable
Gene Annotator (Annotation Comparison)
OLGA (Gene List Generator)
Excel (Download)
MOET (Multi-Ontology Enrichement)
unavailable
GOLF (Gene-Ortholog Location Finder)
unavailable
MOET (Multi-Ontology Enrichement)
GOLF (Gene-Ortholog Location Finder)
x
Send Message
x
Send us a Message
Your email
Message
Send
Submit Data
|
Help
|
Video Tutorials
|
News
|
Publications
|
Download
|
REST API
|
Citing RGD
|
Contact
Home
Search RGD
Grant Resources
Citing RGD
About Us
Contact Us
Data
Genes
Variants
Community Projects
QTLs
Strains
Markers
Genome Information
Ontologies
Cell Lines
References
Download
Submit Data
Analysis & Visualization
OntoMate (Literature Search)
JBrowse (Genome Browser)
Synteny Browser (VCMap)
Variant Visualizer
Multi-Ontology Enrichment (MOET)
Gene-Ortholog Location Finder (GOLF)
InterViewer (Protein-Protein Interactions)
PhenoMiner (Quatitative Phenotypes)
Gene Annotator
OLGA (Gene List Generator)
AllianceMine
GViewer (Genome Viewer)
Diseases
Aging & Age-Related Disease
Cancer & Neoplastic Disease
Cardiovascular Disease
Coronavirus Disease
Developmental Disease
Diabetes
Hematologic Disease
Immune & Inflammatory Disease
Infectious Disease
Liver Disease
Neurological Disease
Obesity & Metabolic Syndrome
Renal Disease
Respiratory Disease
Sensory Organ Disease
Phenotypes & Models
Find Models
Genetic Models
Autism Models
Rat PhenoMiner (Quantitative Phenotypes)
Chinchilla PhenoMiner
Expected Ranges (Quantitative Phenotype)
PhenoMiner Term Comparison
Hybrid Rat Diversity Panel
Phenotypes
Phenotypes in Other Animal Models
Animal Husbandry
Strain Medical Records
Phylogenetics
Strain Availability
Calendar
Rats 101
Submissions
Photo Archive
Pathways
Community
Rat Community Forum
Directory of Rat Laboratories
Video Tutorials
News
RGD Publications
RGD Presentations Archive
Nomenclature Guidelines
Resource Links
Laboratory Resources
Employment Resources
Advanced Search (OLGA)
ONTOLOGY REPORT - ANNOTATIONS
{{ watchLinkText }}
Term:
membrane depolarization during atrial cardiac muscle cell action potential
go back to main search page
Accession:
GO:0098912
browse the term
Definition:
The process in which atrial cardiac muscle cell membrane potential changes in the depolarizing direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential.
Synonyms:
broad_synonym:
atrial cardiac muscle cell depolarization
related_synonym:
atrial depolarization; electrocardiogram PR interval
show annotations for term's descendants Sort by:
symbol
object name
position
reference
evidence
↑ asc
↓ desc
Rat (3)
Mouse (3)
Human (3)
Chinchilla (3)
Bonobo (3)
Dog (3)
Squirrel (3)
Pig (3)
Green Monkey (3)
Naked Mole-rat (3)
All
Genes (3)
membrane depolarization during atrial cardiac muscle cell action potential
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
CACNA1C
calcium voltage-gated channel subunit alpha1 C
involved_in
IMP
(PMID:17224476)
BHF-UCL
PMID:17224476
NCBI chr12:1,970,780...2,697,950
Ensembl chr12:1,970,772...2,697,950
G
CACNB2
calcium voltage-gated channel auxiliary subunit beta 2
involved_in
IMP
(PMID:17224476)
BHF-UCL
PMID:17224476
NCBI chr10:18,140,424...18,543,557
Ensembl chr10:18,140,424...18,543,557
G
SCN5A
sodium voltage-gated channel alpha subunit 5
involved_in
IMP
(PMID:18065446)
BHF-UCL
PMID:18065446
NCBI chr 3:38,548,062...38,649,687
Ensembl chr 3:38,548,057...38,649,743
Term paths to the root
one shortest
all shortest
one longest
all longest
one shortest and longest
all
Path 1
Term
Annotations
biological_process
19711
cellular process
18963
cell communication
7275
cell communication involved in cardiac conduction
59
cell-cell signaling involved in cardiac conduction
31
atrial cardiac muscle cell to AV node cell signaling
19
atrial cardiac muscle cell action potential
19
membrane depolarization during atrial cardiac muscle cell action potential
3
Path 2
Term
Annotations
biological_process
19711
biological regulation
13546
regulation of biological process
13144
regulation of multicellular organismal process
3560
regulation of system process
754
regulation of blood circulation
336
regulation of heart contraction
255
cardiac conduction
100
cell communication involved in cardiac conduction
59
atrial cardiac muscle cell to AV node cell communication
19
atrial cardiac muscle cell to AV node cell signaling
19
atrial cardiac muscle cell action potential
19
membrane depolarization during atrial cardiac muscle cell action potential
3