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Abdominal Pain - Ontology Report - Rat Genome Database

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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:Abdominal Pain
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Accession:DOID:9005734 term browser browse the term
Definition:Sensation of discomfort, distress, or agony in the abdominal region.
Synonyms:exact_synonym: Abdominal Pains;   Colicky Pain;   Colicky Pains
 primary_id: MESH:D015746;   RDO:0004684
 xref: EFO:0003766

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show annotations for term's descendants           Sort by:
Abdominal Pain term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HFE homeostatic iron regulator IAGP ClinVar Annotator: match by term: Abdominal pain ClinVar PMID:678784 PMID:8696333 PMID:8896549 PMID:8896550 PMID:8931958 More... NCBI chr 6:26,087,429...26,098,343
Ensembl chr 6:26,087,226...26,098,343 		JBrowse link
G HMBS hydroxymethylbilane synthase IAGP ClinVar Annotator: match by term: Abdominal pain ClinVar NCBI chr11:119,084,881...119,093,549
Ensembl chr11:119,084,866...119,093,834 		JBrowse link
G IFNA2 interferon alpha 2 EXP CTD Direct Evidence: marker/mechanism CTD PMID:9234591 NCBI chr 9:21,384,255...21,385,398
Ensembl chr 9:21,384,255...21,385,398 		JBrowse link
G TRPA1 transient receptor potential cation channel subfamily A member 1 ISO RGD PMID:24291101 RGD:10043376 NCBI chr 8:72,021,250...72,090,010
Ensembl chr 8:72,019,917...72,075,584 		JBrowse link
immunodeficiency 108 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEBPE CCAAT enhancer binding protein epsilon IAGP ClinVar Annotator: match by term: CEBPE-related condition
ClinVar Annotator: match by term: Pelger-Huet-like anomaly and episodic fever with abdominal pain		 OMIM
ClinVar		 PMID:4831644 PMID:25741868 PMID:26104880 PMID:28492532 PMID:31201888 NCBI chr14:23,117,306...23,119,255
Ensembl chr14:23,117,036...23,120,256 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 146647
    Pathological Conditions, Signs and Symptoms 69213
      Signs and Symptoms 45310
        Digestive Signs and Symptoms 296
          Abdominal Pain 5
            Abdomen, Acute 0
            immunodeficiency 108 1
Path 2
Term Annotations click to browse term
  disease 146647
    disease of anatomical entity 133718
      nervous system disease 71379
        Neurologic Manifestations 37650
          Pain 1020
            Abdominal Pain 5
              Abdomen, Acute 0
              immunodeficiency 108 1
paths to the root