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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:central nervous system lymphoma
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Accession:DOID:3234 term browser browse the term
Definition:A hematologic cancer that has_material_basis_in lymphoma located_in central nervous system. (DO)
Synonyms:exact_synonym: PCNSL;   microglioma;   primary CNS lymphoma;   primary central nervous system lymphoma
 xref: EFO:1000157;   ICD9CM:200.5;   NCI:C9301
For additional species annotation, visit the Alliance of Genome Resources.

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central nervous system lymphoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btk Bruton tyrosine kinase ameliorates ISO RGD PMID:28552327 RGD:124715478 NCBI chrNW_004624902:1,173,101...1,216,662
Ensembl chrNW_004624902:1,182,682...1,216,171 		JBrowse link
G Cd79b CD79b molecule treatment ISO RGD PMID:28619981 RGD:151665208 NCBI chrNW_004624849:1,429,446...1,432,835
Ensembl chrNW_004624849:1,429,912...1,432,955 		JBrowse link
G Il10 interleukin 10 ISO DNA:SNP:promoter:-1082G>A (human) RGD PMID:22628023 RGD:7364831 NCBI chrNW_004624807:4,687,249...4,691,658
Ensembl chrNW_004624807:4,687,176...4,691,732 		JBrowse link
G Myd88 MYD88 innate immune signal transduction adaptor treatment ISO RGD PMID:28619981 RGD:151665208 NCBI chrNW_004624731:2,677,259...2,681,408
Ensembl chrNW_004624731:2,677,290...2,681,489 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 14170
    disease of cellular proliferation 6753
      Neoplasms by Histologic Type 4750
        lymphoma 494
          central nervous system lymphoma 4
            spinal cord lymphoma 0
Path 2
Term Annotations click to browse term
  disease 14170
    disease of cellular proliferation 6753
      cancer 4946
        organ system cancer 4738
          immune system cancer 580
            lymphatic system cancer 580
              lymphoma 494
                central nervous system lymphoma 4
                  spinal cord lymphoma 0
paths to the root